Environmental Data Initiative logo
EDI Staging Environment

This data package was submitted to a staging environment for testing purposes only. Use of these data for anything other than testing is strongly discouraged.

Data Package Summary    View Full Metadata

  • MCR LTER: Coral Reef: 3D photogrammetry improves measurement of growth and biodiversity patterns in branching corals; data for Curtis 2023, Coral Reefs
  • Moorea Coral Reef LTER
    Stier, Adrian; Investigator; MCR LTER
    Osenberg, Craig; Collaborator; MCR LTER
    Curtis, Joseph Schmidt; Collaborator; University of Otago
  • 2023-09-18
  • Moorea Coral Reef LTER, A. Stier, C. Osenberg, and J.S. Curtis. 2023. MCR LTER: Coral Reef: 3D photogrammetry improves measurement of growth and biodiversity patterns in branching corals; data for Curtis 2023, Coral Reefs ver 2. Environmental Data Initiative. https://doi.org/DOI_PLACE_HOLDER (Accessed 2024-12-27).

  • These data and code were generated in support of the manuscript: Curtis JS, Galvan JW, Primo A, Osenberg CW, and AC Stier, Coral Reefs.

    We collected manual and photogrammetry-based measurements of coral size and volume to examine which method best described short-term coral growth and links between coral habitat and biodiversity of CAFI (coral-associated fishes and invertebrates). This study was completed between August and December 2019 on an experimental array located in the back reef off the south shore of Moorea, French Polynesia.

    These data were published in Coral Reefs, analyses and full methods descriptions of this model can be found in the manuscript “3D photogrammetry improves measurement of growth and biodiversity patterns in branching corals”.

    This manuscript uses data collected by the U.S. National Science Foundation's (NSF) Moorea Coral Reef Long Term Ecological Research (MCR LTER) site under Grant No. OCE 2224354 (and earlier awards). Additional financial support to the MCR LTER site was provided through a generous gift from the Gordon and Betty Moore Foundation. Research was completed under permits issued by the French Polynesian Government (Délégation à la Recherche) and the Haut-commissariat de la République en Polynésie Francaise (DTRT) (Protocole d'Accueil 2005-2023).

  • N: -17.45      S: -17.62      E: -149.67      W: -150.0
  • View Full Metadata (31 views)
  • View Quality Report
  • Data Entities:
    1. Fish and Invertebrate (CAFI) Data  (258.1 KiB; 8 downloads) 
    2. Manual colony measurements  (6.2 KiB; 8 downloads) 
    3. Photogrammetry coral measurements - August 2019  (8.5 KiB; 5 downloads) 
    4. Photogrammetry coral measurements - December 2019  (7.1 KiB; 6 downloads) 
    5. R Markdown to generate Photogrammetry CAFI figures  (22.1 KiB; 5 downloads) 
    6. CodeMeta file for photogrammetry_CAFI_figs_v5_2022_11_25.Rmd  (1.0 KiB; 5 downloads) 
    7. R script for Source Data Cleanup  (9.9 KiB; 4 downloads) 
    8. CodeMeta file for source_data_cleanup_2022_11_25.R  (1005 B; 5 downloads) 
    9. R Script for Photogrammetry Stats Aggregated  (6.2 KiB; 4 downloads) 
    10. CodeMeta file for photogrammetry_stats_aggregated_final_2023.R  (1.1 KiB; 3 downloads) 
  • This data package is released under the Creative Commons license Attribution 4.0 International (CC BY 4.0 , see The Data User has an ethical obligation to cite the data source appropriately in any publication or product that results from its use, and notify the data contact or creator. Communication, collaboration, or co-authorship (as appropriate) with the creators of this data package is encouraged to prevent duplicate research or publication. The Data User is urged to contact the authors of these data if any questions about methodology or results occur. The Data User should realize that these data may be actively used by others for ongoing research and that coordination may be necessary to prevent duplication or inappropriate use. The Data User should realize that misinterpretation may occur if data are used outside of the context of the original study. The Data User should be aware that data are updated periodically and it is the responsibility of the Data User to check for new versions of the data. While substantial efforts are made to ensure the accuracy of data and associated documentation, complete accuracy of data sets cannot be guaranteed. This data package (with its components) is made available "as is" and with no warranty of accuracy or fitness for use. The creators of this data package and the repository where these data were obtained shall not be liable for any damages resulting from misinterpretation, use or misuse of the data package or its components.
  • DOI PLACE HOLDER
  • Analyze this data package using:           

Copyright 2024 Environmental Data Initiative. This material is based upon work supported by the National Science Foundation under grants #2223103 and #2223104. Any opinions, findings, conclusions, or recommendations expressed in the material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation. Please contact us with questions, comments, or for technical assistance regarding this web site or the Environmental Data Initiative. Please read our privacy policy to know what information we collect about you and to understand your privacy rights.

EDI is a collaboration between the University of New Mexico and the University of Wisconsin – Madison, Center for Limnology:

UNM logo UW-M logo