Data Package Metadata   View Summary

A dataset for methane concentrations and fluxes for alpine permafrost streams and rivers on the East Qinghai-Tibet Plateau

General Information
Data Package:
Local Identifier:edi.124.1
Title:A dataset for methane concentrations and fluxes for alpine permafrost streams and rivers on the East Qinghai-Tibet Plateau
Alternate Identifier:DOI PLACE HOLDER
Abstract:

This dataset is a collation of 3-year direct measurement values of CH4 concentrations and fluxes for EQTP streams and rivers, along with information on location, hydrological, physical, and chemical conditions of the study sites. Given the rarity and high value of this EQTP data set, it will be very valuable for the next update to global C flux estimates.

Publication Date:2021-01-11

Time Period
Begin:
2016-01-01
End:
2018-01-01

People and Organizations
Contact:Zhang, Liwei (Beijing Normal University) [  email ]
Creator:Zhang, Liwei (Beijing Normal University)
Creator:Xia, Xinghui (Beijing Normal University)
Creator:Liu, Shaoda (Yale University)
Creator:Yang, Zhifeng (Beijing Normal University)
Creator:Stanley, Emily H (University of Wisconsin-Madison)
Creator:Raymond, Peter A (Yale University)

Data Entities
Data Table Name:
Methane dataset for East Qinghai-Tibet Plateau waterways
Description:
Methane dataset for East Qinghai-Tibet Plateau waterways
Data Table Name:
Sampling sites
Description:
Sampling site coordinates and descriptions
Other Name:
Monte Carlo Simulation for Zhang et al 2020
Description:
Monte Carlo Simulation for the paper Zhang et al 2020
Detailed Metadata

Data Entities


Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/edi/124/1/64e0b6bb1c2487e118b8ed7da7821b2f
Name:Methane dataset for East Qinghai-Tibet Plateau waterways
Description:Methane dataset for East Qinghai-Tibet Plateau waterways
Number of Records:114
Number of Columns:22

Table Structure
Object Name:Methane_dataset_for_East_Qinghai_Tibet_Plateau_waterways.csv
Size:25091 bytes
Authentication:4611f22b20e16bb5335737dfb83c96a5 Calculated By MD5
Text Format:
Number of Header Lines:1
Record Delimiter:\r\n
Orientation:column
Simple Delimited:
Field Delimiter:,

Table Column Descriptions
 
Column Name:Sampling_date  
Exact_dates  
Basins  
Sites  
Altitude  
Air_pressure  
LogQw  
Flow_velocity  
mean_DOC  
CH4_concentrations  
CH4_ebullition_chamber_1  
CH4_ebullition_chamber_2  
CH4_ebullition_chamber_3  
CH4_ebullition_chamber_4  
CH4_diffusion_chamber_1  
CH4_diffusion_chamber_2  
CH4_diffusion_chamber_3  
CH4_diffusion_chamber_4  
Total_CH4_chamber_1  
Total_CH4_chamber_2  
Total_CH4_chamber_3  
Total_CH4_chamber_4  
Definition:"Sampling occurred in spring (May-Jun), summer (Jul-Aug) and fall (Sep-Oct)."Sampling dateWhich catchment are these sampling sites located in.The name of each site is the toponym of sampling river reach (details in Sampling_sites.csv).The altitude of each sampling site (above sea level).Real-time air pressure measured at each site.The ratio of river discharge per unit channel width (real-time measured data).Real-time measured flow velocity at each sampling site."Average DOC concentration measured in triplicate at each site. Water samples were filtered through 0.45 um polyethersulphone (PES) syringe filters for determination of DOC concentrations. The filtrates were collected in 50 mL plastic vials, to which 200 uL of H2SO4 was added. DOC was determined with a Vario TOC Select analyzer (Elementar, Germany) by high-temperature catalytic oxidation."Average CH4 concentration measured in triplicate at each site (details in Methods).Ebullitive CH4 fluxes measured in four floating chambers at each transect (details in Methods).Ebullitive CH4 fluxes measured in four floating chambers at each transect (details in Methods).Ebullitive CH4 fluxes measured in four floating chambers at each transect (details in Methods).Ebullitive CH4 fluxes measured in four floating chambers at each transect (details in Methods).Diffusive CH4 fluxes measured in four floating chambers at each transect (details in Methods).Diffusive CH4 fluxes measured in four floating chambers at each transect (details in Methods).Diffusive CH4 fluxes measured in four floating chambers at each transect (details in Methods).Diffusive CH4 fluxes measured in four floating chambers at each transect (details in Methods).Total CH4 fluxes measured in four floating chambers at each transect (details in Methods).Total CH4 fluxes measured in four floating chambers at each transect (details in Methods).Total CH4 fluxes measured in four floating chambers at each transect (details in Methods).Total CH4 fluxes measured in four floating chambers at each transect (details in Methods).
Storage Type:string  
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float  
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float  
float  
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float  
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float  
float  
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float  
float  
float  
float  
float  
float  
Measurement Type:nominaldateTimenominalnominalratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratio
Measurement Values Domain:
Allowed Values and Definitions
Enumerated Domain 
Code Definition
Code2016 Spring
DefinitionSpring 2016
Source
Code Definition
Code2016 Summer
DefinitionSummer 2016
Source
Code Definition
Code2016 Fall
DefinitionFall 2016
Source
Code Definition
Code2017 Spring
DefinitionSpring 2017
Source
Code Definition
Code2017 Summer
DefinitionSummer 2017
Source
Code Definition
Code2018 Spring
DefinitionSpring 2018
Source
Code Definition
Code2018 Fall
DefinitionFall 2018
Source
FormatYYYY/MM/DD
Precision
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeYellow River
DefinitionThe Yellow River basin
Source
Code Definition
CodeYangtze River
DefinitionThe Yangtze River basin
Source
Code Definition
CodeLancang River
DefinitionThe Lancang River basin
Source
Code Definition
CodeNu River
DefinitionThe Nu River basin
Source
DefinitionThe name of each site is the toponym of sampling river reach (details in Sampling_sites.csv).
Unitmeter
Typenatural
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Max4601 
Unitkilopascal
Typereal
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Max84.2 
UnitmetersSquaredPerSecond
Typereal
Min-1.470490676 
Max1.35601412 
UnitmetersPerSecond
Typereal
Min0.44 
Max3.63 
UnitmilligramsPerLiter
Typereal
Min2.02447971 
Max14.01567997 
UnitmicroMolar
Typereal
Min0.008680545 
Max0.532865503 
UnitmillimolePerMeterSquaredPerDay
Typereal
Min
Max725.8283501 
UnitmillimolePerMeterSquaredPerDay
Typereal
Min
Max56.86734354 
UnitmillimolePerMeterSquaredPerDay
Typereal
Min
Max734.362065 
UnitmillimolePerMeterSquaredPerDay
Typereal
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UnitmillimolePerMeterSquaredPerDay
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Max4.154805126 
UnitmillimolePerMeterSquaredPerDay
Typereal
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Max4.007188068 
UnitmillimolePerMeterSquaredPerDay
Typereal
Min0.013540568 
Max3.702727885 
UnitmillimolePerMeterSquaredPerDay
Typereal
Min0.012809244 
Max4.016414134 
UnitmillimolePerMeterSquaredPerDay
Typereal
Min0.041614002 
Max726.3454583 
UnitmillimolePerMeterSquaredPerDay
Typereal
Min0.062190029 
Max57.23002048 
UnitmillimolePerMeterSquaredPerDay
Typereal
Min0.043748053 
Max734.9587284 
UnitmillimolePerMeterSquaredPerDay
Typereal
Min0.069159692 
Max55.30202931 
Missing Value Code:                                            
Accuracy Report:                                            
Accuracy Assessment:                                            
Coverage:                                            
Methods:                                            

Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/edi/124/1/0cfc9ee3504bf75e7857bf716c02c74e
Name:Sampling sites
Description:Sampling site coordinates and descriptions
Number of Records:28
Number of Columns:7

Table Structure
Object Name:Sampling_sites.csv
Size:1996 bytes
Authentication:ac9ee893ca02e6ca2c561eeb5d7864d7 Calculated By MD5
Text Format:
Number of Header Lines:1
Record Delimiter:\r\n
Orientation:column
Simple Delimited:
Field Delimiter:,

Table Column Descriptions
 
Column Name:River  
Basins  
Sampling Sites  
Longitude_E  
Latitude_N  
Stream_and_river_Reaches  
Strahler Stream Order  
Definition:Name of riverRiver basin typeSampling site abbreviations used in the Methane_dataset_for_EQTP_waterways.csv tableLongitude EastLatitude NorthName of stream and river reachesThe Strahler Stream Order
Storage Type:string  
string  
string  
float  
float  
string  
float  
Measurement Type:nominalnominalnominalratiorationominalratio
Measurement Values Domain:
DefinitionName of river
DefinitionRiver basin type
DefinitionSampling site abbreviations used in the Methane_dataset_for_EQTP_waterways.csv table
Unitdegree
Typereal
Min91.98166667 
Max103.3172222 
Unitdegree
Typereal
Min27.73333333 
Max35.93944444 
DefinitionName of stream and river reaches
Unitdimensionless
Typenatural
Min
Max
Missing Value Code:              
Accuracy Report:              
Accuracy Assessment:              
Coverage:              
Methods:              

Non-Categorized Data Resource

Name:Monte Carlo Simulation for Zhang et al 2020
Entity Type:unknown
Description:Monte Carlo Simulation for the paper Zhang et al 2020
Physical Structure Description:
Object Name:Monte_Carlo_Simulation_for_Zhang_et_al_2020.zip
Size:5483 bytes
Authentication:b7e21f031796a0912c1d52e7b962696a Calculated By MD5
Externally Defined Format:
Format Name:application/zip
Data:https://pasta-s.lternet.edu/package/data/eml/edi/124/1/0d01dea94d7141de5ac34da0dc18ba3f

Data Package Usage Rights

This information is released under the Creative Commons license - Attribution - CC BY (https://creativecommons.org/licenses/by/4.0/). The consumer of these data (\"Data User\" herein) is required to cite it appropriately in any publication that results from its use. The Data User should realize that these data may be actively used by others for ongoing research and that coordination may be necessary to prevent duplicate publication. The Data User is urged to contact the authors of these data if any questions about methodology or results occur. Where appropriate, the Data User is encouraged to consider collaboration or co-authorship with the authors. The Data User should realize that misinterpretation of data may occur if used out of context of the original study. While substantial efforts are made to ensure the accuracy of data and associated documentation, complete accuracy of data sets cannot be guaranteed. All data are made available \"as is.\" The Data User should be aware, however, that data are updated periodically and it is the responsibility of the Data User to check for new versions of the data. The data authors and the repository where these data were obtained shall not be liable for damages resulting from any use or misinterpretation of the data. Thank you.

Keywords

By Thesaurus:
LTER Controlled Vocabularybiogeochemistry, fluxes, freshwater, gases, methane, rivers, streams, alpine, permafrost

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

Methods and protocols used in the collection of this data package
Description:

GHG collection and measurement

Surface water samples were collected with 120 mL glass serum bottles at wrist depth for the determination of CH4 concentrations; samples were collected in triplicate at each site. After poisoning with a saturated solution of NaCl for CH4, the serum bottle was sealed with butyl stoppers below the water surface, crimped with aluminum caps, and stored at ambient temperature in the dark. CH4 concentrations were measured using the headspace equilibration method44 on a gas chromatography equipped with a flame ionization detector for CH4 (Agilent 7890B GC-FID). The partial pressure of CO2 (pCO2) in surface water was measured in-situ using a Qubit Dissolved CO2 System equipped with an internal pump and a pCO2 probe (S157-P, Qubit Biology Inc., Canada). The pCO2 probe is coated with a polytetrafluoroethylene membrane sleeve that is permeable to CO2 gases but not to water. The system was calibrated with standard CO2 gases ranging from 0 to to 10,000 μatm. Recalibration of the system was done before each round of fieldwork.

Fluxes of CO2 and CH4 were measured simultaneously with surface water sample collection. Local ambient air samples were also collected at the same time. At each site, four floating chambers were deployed from the shallow water near the river bank to the deep water in the mid-channel to measure carbon gas fluxes. These chambers were of the same size and shape and streamlined with a flexible plastic foil collar to minimize the effects of chamber-induced turbulence when measuring fluxes. Also, each chamber was covered with aluminum foil to reflect sunlight and minimize internal heating. Chambers were allowed to drift and each chamber measurement lasted for 60 to 80 min. After mixing the chamber content 3 times, 50 mL of gas were extracted from inside the chambers to air-tight gas sampling bags at the 0, 5, 10, 20, 40, 60, 80 min time intervals. This multi-chamber method and prolonged deployment not only increased the probability of capturing ebullition but also incorporated spatiotemporal variability in both diffusion and ebullition within and among streams and rivers. CO2 and CH4 concentrations of gas samples were determined as described above.

In addition to gas sampling, surface water samples were collected for physicochemical analyses at each sampling sites. Sediment samples were collected simultaneously alongside every gas and surface water sampling for physicochemical and microbial analyses unless there were only gravels/cobbles in the riverbed, and a total of 80 sediment samples were obtained. Air temperature, atmospheric pressure, and wind speed were measured in situ with a portable anemometer (Testo 480, Germany). Water temperature, pH, DO, ORP, and conductivity were measured in situ with portable field probes (Hach HQ40d). Precipitation and solar radiation were obtained from National Meteorological Information Center (http://data.cma.cn/). Flow velocity, discharge, width, and mean depth of streams and rivers were provided by hydrological stations at each sampling site.

Flux calculation

Total gas fluxes were calculated according to the following equation:

Ft = (nt – n0)/(A x t)

where, nt and no are the number of moles of carbon gases in the chamber at time t and time zero (mol), respectively; A is the surface area of water covered by the chamber (m2); and t is the measurement duration time of drifting (min). Diffusive and ebullitive fluxes for CH4 were separated using the Campeau et al. approach. Briefly, the Ft for CO2 is assumed to be exclusively diffusive (that is, the CO2 ebullition is negligible). Only the linear section of the pCO2 increase curve during the first 10 min of chamber deployment was used for FCO2 calculation to eliminate possible biases due to gas accumulation in the chambers which will affect the flux rates. The theoretical diffusive k for CH4 was calculated based upon kCO2 as follows:

kCH4/kCO2 = (ScCH4/ScCO2)^-n

where, kCH4 and kCO2 are the gas transfer velocity of CH4 and CO2; Sc is the Schmidt number and n is assigned a value of 1/2 for wind speed > 3.6 m s^-1 or 2/3 for wind speed < 3.6 m s^-1. We then calculated the theoretical diffusive flux for CH4 according to:

Fd = k (Cwater – Ceq)

where k is the gas transfer velocity (m·d^-1), Cwater is the water gas concentration (mol·m^-3), and Ceq is the gas concentration in water in equilibrium with the local atmosphere corrected for temperature induced changes in solubility according to the Henry’s law (mol m^-3). Thus, the difference between the total and diffusive fluxes is attributed to ebullition.

People and Organizations

Publishers:
Organization:Environmental Data Initiative
Email Address:
info@environmentaldatainitiative.org
Web Address:
https://environmentaldatainitiative.org
Creators:
Individual: Liwei Zhang
Organization:Beijing Normal University
Email Address:
zhangliwei@mail.bnu.edu.cn
Individual: Xinghui Xia
Organization:Beijing Normal University
Email Address:
xiaxh@bnu.edu.cn
Individual: Shaoda Liu
Organization:Yale University
Email Address:
shaoda.liu@yale.edu
Individual: Zhifeng Yang
Organization:Beijing Normal University
Email Address:
zfyang@bnu.edu.cn
Individual: Emily H Stanley
Organization:University of Wisconsin-Madison
Email Address:
ehstanley@wisc.edu
Individual: Peter A Raymond
Organization:Yale University
Email Address:
peter.raymond@yale.edu
Contacts:
Individual: Liwei Zhang
Organization:Beijing Normal University
Email Address:
zhangliwei@mail.bnu.edu.cn

Temporal, Geographic and Taxonomic Coverage

Temporal, Geographic and/or Taxonomic information that applies to all data in this dataset:

Time Period
Begin:
2016-01-01
End:
2018-01-01
Geographic Region:
Description:The Qinghai-Tibet Plateau, or 'Third Pole' of the Earth, with an average elevation of over 4000 m, is the cradle of ten large Asian rivers and the largest cryosphere outside the Arctic and Antarctic.
Bounding Coordinates:
Northern:  36Southern:  28
Western:  90Eastern:  105

Project

Parent Project Information:

Title:No project title to report
Personnel:
Individual: Xinghui Xia
Organization:Beijing Normal University
Email Address:
xiaxh@bnu.edu.cn
Role:Principal Investigator
Funding: National Key R&D Program of China 2017YFA0605001
Related Project:
Title:No project title to report
Personnel:
Individual: Xinghui Xia
Organization:Beijing Normal University
Email Address:
xiaxh@bnu.edu.cn
Role:Principal Investigator
Funding: National Natural Science Foundation of China 91547207
Related Project:
Title:No project title to report
Personnel:
Individual: Xinghui Xia
Organization:Beijing Normal University
Email Address:
xiaxh@bnu.edu.cn
Role:Principal Investigator
Funding: Innovative Research Group of the National Natural Science Foundation of China 51721093

Maintenance

Maintenance:
Description:Completed
Frequency:
Other Metadata

Additional Metadata

additionalMetadata
        |___text '\n    '
        |___element 'metadata'
        |     |___text '\n      '
        |     |___element 'unitList'
        |     |     |___text '\n        '
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        |     |     |     |  \___attribute 'id' = 'microMolar'
        |     |     |     |  \___attribute 'multiplierToSI' = '1000000'
        |     |     |     |  \___attribute 'name' = 'microMolar'
        |     |     |     |  \___attribute 'parentSI' = 'molesPerCubicMeter'
        |     |     |     |  \___attribute 'unitType' = 'amountOfSubstanceConcentration'
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        |     |     |     |  \___attribute 'multiplierToSI' = '86400000'
        |     |     |     |  \___attribute 'name' = 'millimolePerMeterSquaredPerDay'
        |     |     |     |  \___attribute 'parentSI' = 'molesPerMeterSquaredPerSecond'
        |     |     |     |  \___attribute 'unitType' = 'massFlux'
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