Data Package Metadata View Summary

Phenotypic trait variation of Herminium monorchis in the Qinghai-Tibetan Plateau with grazing intensity and climatic conditions

General Information

Data Package:

Local Identifier:

edi.1366.1

Title:

Phenotypic trait variation of Herminium monorchis in the Qinghai-Tibetan Plateau with grazing intensity and climatic conditions

Alternate Identifier:

DOI PLACE HOLDER

Abstract:

This data set contains raw data supporting the research entitled “Livestock grazing outweighs climate in driving trait variation of a widespread alpine plant” (currently under peer review), which documents how phenotypic traits of a widespread herbaceous plant in the Qinghai-Tibetan Plateau, Herminium monorchis, vary with grazing intensity and environmental conditions.

Publication Date:

2023-03-04

For more information:
Visit:	DOI PLACE HOLDER

Time Period

Begin:

2022-07-01

End:

2022-08-01

People and Organizations
Contact:	Wang, Hanchen (Institute of Botany, Chinese Academy of Sciences, Graduate student) [ email ]
Creator:	Wang, Hanchen (Institute of Botany, Chinese Academy of Sciences, Graduate student)
Associate:	Wang(Institute of Botany, Chinese Academy of Sciences, Graduate student, Graduate Student)

Data Entities
Data Table Name:	Herminium_IndividualData
Description:	This table contains data on the phenotypic trait values of each Herminium monorchis individual we me measured, together with its site of origin.
Data Table Name:	Herminium_SiteData
Description:	This table contains data on the key environmental variables of each field site where we collected phenotypic information of Herminium monorchis.

Detailed Metadata

Data Entities

Data Table


Data:	https://pasta-s.lternet.edu/package/data/eml/edi/1366/1/2d472ede166e00232269b2d2a7a7fb02
Name:	Herminium_IndividualData
Description:	This table contains data on the phenotypic trait values of each Herminium monorchis individual we me measured, together with its site of origin.
Number of Records:	326
Number of Columns:	6

Table Structure

Object Name:

Herminium_IndividualData.csv

Size:

10611 byte

Authentication:

289ce755c744ba2b74d9a009abf9c436 Calculated By MD5

Text Format:

Number of Header Lines:

Record Delimiter:

\r\n

Orientation:

column

Simple Delimited:

Field Delimiter:	,
Quote Character:	"

Table Column Descriptions

Ind.No

Site

VegetativeHeight(cm)

InflorescenceHeight(cm)

FlowerNo

FlowerDensity(FlowerNo/InflorescenceHeight)

Column Name:

Ind.No

Site

VegetativeHeight(cm)

InflorescenceHeight(cm)

FlowerNo

FlowerDensity(FlowerNo/InflorescenceHeight)

Definition:

The serial number of all measured individuals of Herminium monorchis

The name of each field site

shortest distance between the tip of the highest leaf and the ground

shortest distance between the tip of inflorescence and the ground

The number of flower borne on a fully developed, intact inflorescence

the ratio of flower number to inflorescence height (in cm-1)

Storage Type:

float

string

float

Measurement Type:

ratio

nominal

ratio

Measurement Values Domain:

Unit	individual
Type	integer

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	1
Definition	Site No.1
Source

Code Definition

Code	2
Definition	Site No.2
Source

Code Definition

Code	3
Definition	Site No.3
Source

Code Definition

Code	4
Definition	Site No.4
Source

Code Definition

Code	5
Definition	Site No.5
Source

Code Definition

Code	6
Definition	Site No.6
Source

Code Definition

Code	7
Definition	Site No.7
Source

Code Definition

Code	8
Definition	Site No.8
Source

Code Definition

Code	9
Definition	Site No.9
Source

Code Definition

Code	10
Definition	Site No.10
Source

Code Definition

Code	11
Definition	Site No.11
Source

Code Definition

Code	12
Definition	Site No.12
Source

Code Definition

Code	13
Definition	Site No.13
Source

Code Definition

Code	14
Definition	Site No.14
Source

Code Definition

Code	15
Definition	Site No.15
Source

Code Definition

Code	16
Definition	Site No.16
Source

Code Definition

Code	17
Definition	Site No.17
Source

Code Definition

Code	18
Definition	Site No.18
Source

Code Definition

Code	19
Definition	Site No.19
Source

Code Definition

Code	20
Definition	Site No.20
Source

Code Definition

Code	21
Definition	Site No.21
Source

Code Definition

Code	22
Definition	Site No.22
Source

Code Definition

Code	23
Definition	Site No.23
Source

Code Definition

Code	24
Definition	Site No.24
Source

Unit	centimeter
Type	real

Unit	centimeter
Type	real

Unit	Not applicable
Type	integer

Unit	cm-1
Type	real

Missing Value Code:

Accuracy Report:

Accuracy Assessment:

Coverage:

Methods:

Data Table


Data:	https://pasta-s.lternet.edu/package/data/eml/edi/1366/1/bc5ad8596e4598defde2956400de2b93
Name:	Herminium_SiteData
Description:	This table contains data on the key environmental variables of each field site where we collected phenotypic information of Herminium monorchis.
Number of Records:	24
Number of Columns:	11

Table Structure

Object Name:

Herminium_SiteData.csv

Size:

2236 byte

Authentication:

b86960741bc142046aa43fb8df396c24 Calculated By MD5

Text Format:

Number of Header Lines:

Record Delimiter:

\r\n

Orientation:

column

Simple Delimited:

Field Delimiter:	,
Quote Character:	"

Table Column Descriptions

Site

#Ind

DryDungWeight(g)

SoilOrganicC(%)

SoilAN(mg/kg)

SoilAP(mg/kg)

GrowthSeasonPrepcipitation(mm)

GrowthSeasonMeanTemperature(°C)

GrowthSeasonMeanPAR(W/m2)

MeanAnnualTemperature(°C)

DryForageMass(g)

Column Name:

Site

#Ind

DryDungWeight(g)

SoilOrganicC(%)

SoilAN(mg/kg)

SoilAP(mg/kg)

GrowthSeasonPrepcipitation(mm)

GrowthSeasonMeanTemperature(°C)

GrowthSeasonMeanPAR(W/m2)

MeanAnnualTemperature(°C)

DryForageMass(g)

Definition:

The name of each field site

The number of Herminium monorchis individuals measured at each field site.

The dry weight of mammal dung collected within an area of 10 × 10 m at each field site

The content of soil organic carbon

The content of soil available nitrogen

The content of soil available phosphorus

The total precipitation of each field site during May to August (averaged across 2011-2020)

The mean temperature of each field site during May to August (averaged across 2011-2020)

The mean photosynthetically active radiation of each field site during May to August (averaged across 2011-2018)

The mean annual temperature of each field site (averaged across 2011-2020)

The mean dry mass of forage plants collected within a 0.5 × 0.5 m2 quadrat

Storage Type:

string

float

Measurement Type:

nominal

ratio

Measurement Values Domain:

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	1
Definition	Site No.1
Source

Code Definition

Code	2
Definition	Site No.2
Source

Code Definition

Code	3
Definition	Site No.3
Source

Code Definition

Code	4
Definition	Site No.4
Source

Code Definition

Code	5
Definition	Site No.5
Source

Code Definition

Code	6
Definition	Site No.6
Source

Code Definition

Code	7
Definition	Site No.7
Source

Code Definition

Code	8
Definition	Site No.8
Source

Code Definition

Code	9
Definition	Site No.9
Source

Code Definition

Code	10
Definition	Site No.10
Source

Code Definition

Code	11
Definition	Site No.11
Source

Code Definition

Code	12
Definition	Site No.12
Source

Code Definition

Code	13
Definition	Site No.13
Source

Code Definition

Code	14
Definition	Site No.14
Source

Code Definition

Code	15
Definition	Site No.15
Source

Code Definition

Code	16
Definition	Site No.16
Source

Code Definition

Code	17
Definition	Site No.17
Source

Code Definition

Code	18
Definition	Site No.18
Source

Code Definition

Code	19
Definition	Site No.19
Source

Code Definition

Code	20
Definition	Site No.20
Source

Code Definition

Code	21
Definition	Site No.21
Source

Code Definition

Code	22
Definition	Site No.22
Source

Code Definition

Code	23
Definition	Site No.23
Source

Code Definition

Code	24
Definition	Site No.24
Source

Unit	individual
Type	real

Unit	gram
Type	real

Unit	%
Type	real

Unit	mg/kg
Type	real

Unit	mg/kg
Type	real

Unit	millimeter
Type	real

Unit	degree
Type	real

Unit	W/m2
Type	real

Unit	degree
Type	real

Unit	gram
Type	real

Missing Value Code:

Accuracy Report:

Accuracy Assessment:

Coverage:

Methods:

Data Package Usage Rights

This data package is released to the "public domain" under Creative Commons CC0 1.0 "No Rights Reserved" (see: https://creativecommons.org/publicdomain/zero/1.0/). It is considered professional etiquette to provide attribution of the original work if this data package is shared in whole or by individual components. A generic citation is provided for this data package on the website https://portal.edirepository.org (herein "website") in the summary metadata page. Communication (and collaboration) with the creators of this data package is recommended to prevent duplicate research or publication. This data package (and its components) is made available "as is" and with no warranty of accuracy or fitness for use. The creators of this data package and the website shall not be liable for any damages resulting from misinterpretation or misuse of the data package or its components. Periodic updates of this data package may be available from the website. Thank you.

Keywords

By Thesaurus:
(No thesaurus)	intraspecific variation, anthropogenic disturbances, Qinghai-Tibetan Plateau (QTP), functional trait
LTER Controlled Vocabulary	grazing, climate change

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

Methods and protocols used in the collection of this data package

Description:

Field sampling and measurement: we selected alpine meadows in the Eastern Qinghai-Tibetan Plateau where Herminium monorchis occur as field sites (n = 24). At each site, we collected phenotypic information for mature (intact and blossoming) individuals of H. monorchis. All mammal dung, as well as multiple topsoil and forage (edible herbaceous plants) samples, were also collected within an area of 10 × 10 m. We also recorded coordinates and elevation of each site.

Description:

Sample processing: Upon returning to the laboratory, all collected mammal dung and forage materials were dried to constant mass; topsoil samples were processed accordingly in order for measurement of organic carbon, available nitrogen, and available phosphorus contents.

Description:

Statistical analyses: Environmental data of each filed site were collected from online databases. Dry mass of mammal dung, forage materials, as well as site-specific mean annual temperature, were used to compute estimates for local grazing intensity. With all these data collected, we constructed structural equation models to quantify how phenotypic traits of H. monorchis are regulated by grazing and environmental factors, both directly and indirectly.

People and Organizations

Publishers:

Organization:

Environmental Data Initiative

Email Address:

info@edirepository.org

Web Address:

https://edirepository.org

Id:

https://ror.org/0330j0z60

Creators:

Individual:

Hanchen Wang

Organization:

Institute of Botany, Chinese Academy of Sciences

Position:

Graduate student

Email Address:

wanghanchen@ibcas.ac.cn

Id:

https://orcid.org/0000-0002-4690-8052

Contacts:

Individual:

Hanchen Wang

Organization:

Institute of Botany, Chinese Academy of Sciences

Position:

Graduate student

Email Address:

wanghanchen@ibcas.ac.cn

Id:

https://orcid.org/0000-0002-4690-8052

Associated Parties:

Individual:

Wang

Organization:

Institute of Botany, Chinese Academy of Sciences

Position:

Graduate student

Email Address:

wanghanchen@ibcas.ac.cn

Id:

https://orcid.org/0000-0002-4690-8052

Role:

Graduate Student

Metadata Providers:

Individual:

Hanchen Wang

Organization:

Institute of Botany, Chinese Academy of Sciences

Email Address:

wanghanchen@ibcas.ac.cn

Id:

https://orcid.org/0000-0002-4690-8052

Temporal, Geographic and Taxonomic Coverage

Temporal, Geographic and/or Taxonomic information that applies to all data in this dataset:

Time Period

Begin:

2022-07-01

End:

2022-08-01

Geographic Region:

Description:

Information in this data set was collected on alpine meadows of the Eastern Qinghai-Tibetan Plateau.

Bounding Coordinates:

Northern:	37.001620336	Southern:	29.516812489
Western:	96.284798972	Eastern:	102.365852184

Taxonomic Range:

General Coverage:

The focal species, Herminium monorchis, was identified to the species level with assurance. Other plant materials were only classified as edible / inedible.

Classification:

Rank Name:	Species
Rank Value:	Herminium monorchis (L.) R. Br.

Project

Parent Project Information:

Title:

Grazing and environmental effects on phenotypic variation of Herminium monorchis

Personnel:

Individual:

Wang

Organization:

Institute of Botany, Chinese Academy of Sciences

Position:

Graduate student

Email Address:

wanghanchen@ibcas.ac.cn

Id:

https://orcid.org/0000-0002-4690-8052

Role:

Graduate Student

Maintenance

Maintenance:

Description:	This data set was recently collected, and has undergone careful check before submission. Please directly contact the creators if any maintenance is needed. The creators will also maintain it periodically.
Frequency:	asNeeded

Other Metadata

Additional Metadata

additionalMetadata
        |___text '\n    '
        |___element 'metadata'
        |     |___text '\n      '
        |     |___element 'unitList'
        |     |     |___text '\n        '
        |     |     |___element 'unit'
        |     |     |     |  \___attribute 'id' = 'individual'
        |     |     |     |  \___attribute 'name' = 'individual'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description'
        |     |     |     |___text '\n        '
        |     |     |___text '\n        '
        |     |     |___element 'unit'
        |     |     |     |  \___attribute 'id' = 'Not applicable'
        |     |     |     |  \___attribute 'name' = 'Not applicable'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description'
        |     |     |     |___text '\n        '
        |     |     |___text '\n        '
        |     |     |___element 'unit'
        |     |     |     |  \___attribute 'id' = 'cm-1'
        |     |     |     |  \___attribute 'name' = 'cm-1'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description'
        |     |     |     |___text '\n        '
        |     |     |___text '\n        '
        |     |     |___element 'unit'
        |     |     |     |  \___attribute 'id' = '%'
        |     |     |     |  \___attribute 'name' = '%'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description'
        |     |     |     |___text '\n        '
        |     |     |___text '\n        '
        |     |     |___element 'unit'
        |     |     |     |  \___attribute 'id' = 'mg/kg'
        |     |     |     |  \___attribute 'name' = 'mg/kg'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description'
        |     |     |     |___text '\n        '
        |     |     |___text '\n        '
        |     |     |___element 'unit'
        |     |     |     |  \___attribute 'id' = 'W/m2'
        |     |     |     |  \___attribute 'name' = 'W/m2'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description'
        |     |     |     |___text '\n        '
        |     |     |___text '\n      '
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Additional Metadata

additionalMetadata
        |___text '\n    '
        |___element 'metadata'
        |     |___text '\n      '
        |     |___element 'emlEditor'
        |     |        \___attribute 'app' = 'ezEML'
        |     |        \___attribute 'release' = '2023.02.19'
        |     |___text '\n    '
        |___text '\n  '

Copyright 2024 Environmental Data Initiative. This material is based upon work supported by the National Science Foundation under grants #2223103 and #2223104. Any opinions, findings, conclusions, or recommendations expressed in the material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation. Please contact us with questions, comments, or for technical assistance regarding this web site or the Environmental Data Initiative. Please read our privacy policy to know what information we collect about you and to understand your privacy rights.

EDI is a collaboration between the University of New Mexico and the University of Wisconsin – Madison, Center for Limnology:

Data Package Metadata View Summary

Phenotypic trait variation of Herminium monorchis in the Qinghai-Tibetan Plateau with grazing intensity and climatic conditions

Data Entities

Data Table

Data Table

Data Package Usage Rights

Keywords

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

People and Organizations

Temporal, Geographic and Taxonomic Coverage

Project

Parent Project Information:

Maintenance

Additional Metadata

Additional Metadata

Recently Added

Recently Updated

Data Package Metadata View Summary

Phenotypic trait variation of Herminium monorchis in the Qinghai-Tibetan Plateau with grazing intensity and climatic conditions

+/- Data Entities

Data Table

Data Table

+/- Data Package Usage Rights

+/- Keywords

+/- Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

+/- People and Organizations

+/- Temporal, Geographic and Taxonomic Coverage

+/- Project

Parent Project Information:

+/- Maintenance

+/- Additional Metadata

+/- Additional Metadata

Data Entities

Data Package Usage Rights

Keywords

Methods and Protocols

People and Organizations

Temporal, Geographic and Taxonomic Coverage

Project

Maintenance

Additional Metadata

Additional Metadata