Data Package Metadata View Summary

Data for Phenotypically plastic responses to freshwater salinization in larval amphibians: Induced tolerance and induced sensitivity

General Information

Data Package:

Local Identifier:

edi.1515.1

Title:

Data for Phenotypically plastic responses to freshwater salinization in larval amphibians: Induced tolerance and induced sensitivity

Alternate Identifier:

DOI PLACE HOLDER

Abstract:

These data support a paper published by Relyea et al. in 2023 in the journal Environmental Pollution. In this manuscript titled 'Phenotypically plastic responses to freshwater salinization in larval amphibians: induced tolerance and induced sensitivity' the authors use a lab experiment to examine the effects of low levels of exposure to road salt pollution on amphibian responses to higher subsequent doses of the contaminant.

Publication Date:

2023-10-10

For more information:
Visit:	DOI PLACE HOLDER

Time Period

Begin:

2022

End:

2022

People and Organizations
Contact:	Relyea, Rick [ email ]
Creator:	Relyea, Rick (Rensselaer Polytechnic Institute)
Creator:	Shepard, Isaac (University of Maine)
Creator:	Mattis, Brian (Rensselaer Polytechnic Institute)
Creator:	Shermerhorn, Candace (Rensselaer Polytechnic Institute)

Data Entities
Data Table Name:	2022_induction_ttd_data
Description:	These are the data indicating the time to death for each individual tadpole in the experiment
Data Table Name:	induction_initial_mass_stage
Description:	These are data on the initial body mass and Gosner stage of tadpoles from each of the populations at the time of the start of the experiment
Data Table Name:	site_information
Description:	General information about the location, and contamination levels of the ponds eggs were collected from for the experiments

Detailed Metadata

Data Entities

Data Table


Data:	https://pasta-s.lternet.edu/package/data/eml/edi/1515/1/d80c01c3988fd9906664f5c556128fbd
Name:	2022_induction_ttd_data
Description:	These are the data indicating the time to death for each individual tadpole in the experiment
Number of Records:	360
Number of Columns:	5

Table Structure

Object Name:

2022_induction_ttd_data.csv

Size:

7393 byte

Authentication:

977e73e35285576bb238ddf22e008eb2 Calculated By MD5

Text Format:

Number of Header Lines:

Record Delimiter:

\r\n

Orientation:

column

Simple Delimited:

Field Delimiter:	,
Quote Character:	"

Table Column Descriptions

population

induced

treatment

hour_dead

Column Name:

population

induced

treatment

hour_dead

Definition:

Unique identifying number given to each individual tadpole

A three or four letter code identifying which population the tadpole belongs to. Full population names can be found in the 'site_information' file

Indicates whether the individual was exposed (yes) or not (no) to a non-lethal salt treatment prior to the time to death experiment

Indicates whether the individual was exposed to a lethal salt dose (salt) or not (ctrl) during the time-to-death experiment

The hour past the start time of the time-to-death experiment that the individual was recorded to have perished. na indicates it survived until the experiment was terminated.

Storage Type:

float

string

Measurement Type:

ratio

nominal

Measurement Values Domain:

Unit	none
Type	integer

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	ALG
Definition	Algonquin
Source

Code Definition

Code	APHS
Definition	Averill Park High School
Source

Code Definition

Code	ATL
Definition	Atlantis
Source

Code Definition

Code	BOB
Definition	Bob's pond
Source

Code Definition

Code	COL
Definition	Coolage
Source

Code Definition

Code	DBY
Definition	Derby
Source

Code Definition

Code	DCH
Definition	Dutch Church
Source

Code Definition

Code	EGTP
Definition	East Greenbush Tech Park
Source

Code Definition

Code	HST
Definition	Hurst
Source

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	no
Definition	not induced
Source

Code Definition

Code	yes
Definition	induced
Source

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	ctrl
Definition	Control - no lethal salt dose
Source

Code Definition

Code	salt
Definition	exposed to a lethal salt dose
Source

Definition

text

Missing Value Code:

Code	na
Expl	lived until the end of the experiment

Accuracy Report:

Accuracy Assessment:

Coverage:

Methods:

Data Table


Data:	https://pasta-s.lternet.edu/package/data/eml/edi/1515/1/b127746f4bfc2b4a6bdc33d41fb82998
Name:	induction_initial_mass_stage
Description:	These are data on the initial body mass and Gosner stage of tadpoles from each of the populations at the time of the start of the experiment
Number of Records:	89
Number of Columns:	4

Table Structure

Object Name:

induction_initial_mass_stage.csv

Size:

1374 byte

Authentication:

be06c72f57de3adde3b21f49657938b7 Calculated By MD5

Text Format:

Number of Header Lines:

Record Delimiter:

\r\n

Orientation:

column

Simple Delimited:

Field Delimiter:	,
Quote Character:	"

Table Column Descriptions

population

mass

cum_mass

gosner

Column Name:

population

mass

cum_mass

gosner

Definition:

A three or four letter code identifying which population the tadpole belongs to. Full population names can be found in the 'site_information' file

The mass of the individual tadpole

The cumulative mass of all the tadpoles measured for that population

The gosner development stage of the individual tadpole

Storage Type:

string

float

string

Measurement Type:

nominal

ratio

nominal

Measurement Values Domain:

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	ALG
Definition	Algonquin
Source

Code Definition

Code	APHS
Definition	Averill Park High School
Source

Code Definition

Code	ATL
Definition	Atlantis
Source

Code Definition

Code	BOB
Definition	Bob's pond
Source

Code Definition

Code	COL
Definition	Coolage
Source

Code Definition

Code	DBY
Definition	Derby
Source

Code Definition

Code	DCH
Definition	Dutch Church
Source

Code Definition

Code	EGTP
Definition	East Greenbush Tech Park
Source

Code Definition

Code	HST
Definition	Hurst
Source

Unit	milligram
Type	integer

Unit	milligram
Type	integer

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	24
Definition	24th Gosner development stage
Source

Code Definition

Code	25
Definition	25th Gosner development stage
Source

Code Definition

Code	26
Definition	26th Gosner development stage
Source

Code Definition

Code	27
Definition	27th Gosner development stage
Source

Code Definition

Code	28
Definition	28th Gosner development stage
Source

Missing Value Code:

Accuracy Report:

Accuracy Assessment:

Coverage:

Methods:

Data Table


Data:	https://pasta-s.lternet.edu/package/data/eml/edi/1515/1/a940490e0324e1ad43a44772878ff171
Name:	site_information
Description:	General information about the location, and contamination levels of the ponds eggs were collected from for the experiments
Number of Records:	9
Number of Columns:	7

Table Structure

Object Name:

site_information.csv

Size:

684 byte

Authentication:

017f9eb5f9b1d1ecf02ed37e020bbcc5 Calculated By MD5

Text Format:

Number of Header Lines:

Record Delimiter:

\r\n

Orientation:

column

Simple Delimited:

Field Delimiter:	,
Quote Character:	"

Table Column Descriptions

SiteName

SiteCoordinate

DateCollected

Cl-_mgL

spec_con_us_cm

Temp_C

site_abbrev

Column Name:

SiteName

SiteCoordinate

DateCollected

Cl-_mgL

spec_con_us_cm

Temp_C

site_abbrev

Definition:

The name of the site where eggs were collected

The geographic coordinates of the site where eggs were collected

The date eggs were collected at a site

The chloride concentration of the pond at the time of egg collection

The specific conductivity of the pond at the time of egg collection

The temperature of the pond at the time of egg collection

A three or four letter code associated with the specific pond - used in other data tables

Storage Type:

string

dateTime

float

string

Measurement Type:

nominal

dateTime

ratio

nominal

Measurement Values Domain:

Definition

text

Definition

text

Format	YYYY-MM-DD
Precision

Unit	microgramPerLiter
Type	real

Unit	microsiemens per cubic centimeter
Type	real

Unit	celsius
Type	real

Definition

text

Missing Value Code:

Accuracy Report:

Accuracy Assessment:

Coverage:

Methods:

Data Package Usage Rights

This information is released under the Creative Commons license - Attribution - CC BY (https://creativecommons.org/licenses/by/4.0/). The consumer of these data ("Data User" herein) is required to cite it appropriately in any publication that results from its use. The Data User should realize that these data may be actively used by others for ongoing research and that coordination may be necessary to prevent duplicate publication. The Data User is urged to contact the authors of these data if any questions about methodology or results occur. Where appropriate, the Data User is encouraged to consider collaboration or co-authorship with the authors. The Data User should realize that misinterpretation of data may occur if used out of context of the original study. While substantial efforts are made to ensure the accuracy of data and associated documentation, complete accuracy of data sets cannot be guaranteed. All data are made available "as is." The Data User should be aware, however, that data are updated periodically and it is the responsibility of the Data User to check for new versions of the data. The data authors and the repository where these data were obtained shall not be liable for damages resulting from any use or misinterpretation of the data. Thank you.

Keywords

By Thesaurus:
(No thesaurus)	Resistance, Development, Evolution, Induction, Ecology, Acclimation

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

Methods and protocols used in the collection of this data package

Description:

Data on salinity were measured using a YSI meter. Other data were collected using a laboratory balance and through visual observation.

People and Organizations

Publishers:

Organization:

Environmental Data Initiative

Email Address:

info@edirepository.org

Web Address:

https://edirepository.org

Id:

https://ror.org/0330j0z60

Creators:

Individual:

Rick Relyea

Organization:

Rensselaer Polytechnic Institute

Email Address:

relyer@rpi.edu

Individual:

Isaac Shepard

Organization:

University of Maine

Email Address:

isaac.shepard@maine.edu

Id:

https://orcid.org/0000-0002-1471-3242

Individual:	Brian Mattis
Organization:	Rensselaer Polytechnic Institute

Individual:	Candace Shermerhorn
Organization:	Rensselaer Polytechnic Institute

Contacts:

Individual:

Rick Relyea

Email Address:

relyer@rpi.edu

Temporal, Geographic and Taxonomic Coverage

Temporal, Geographic and/or Taxonomic information that applies to all data in this dataset:

Time Period

Begin:

2022

End:

2022

Geographic Region:

Description:

Ponds were scattered around Troy, NY USA

Bounding Coordinates:

Northern:	42.707	Southern:	42.626
Western:	-73.698	Eastern:	-73.363

Taxonomic Range:

General Coverage:

Wood frogs - Rana sylvaticus

Classification:

Rank Name:	Species
Rank Value:	Rana sylvaticus

Project

Parent Project Information:

Title:

Phenotypically plastic responses to freshwater salinization in larval amphibians: Induced tolerance and induced sensitivity

Personnel:

Individual:

Rick Relyea

Organization:

Rensselaer Polytechnic Institute

Email Address:

relyer@rpi.edu

Role:

Lead PI

Maintenance

Maintenance:

Description:	Data are final
Frequency:

Other Metadata

Additional Metadata

additionalMetadata
        |___text '\n    '
        |___element 'metadata'
        |     |___text '\n      '
        |     |___element 'unitList'
        |     |     |___text '\n        '
        |     |     |___element 'unit'
        |     |     |     |  \___attribute 'id' = 'none'
        |     |     |     |  \___attribute 'name' = 'none'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description'
        |     |     |     |     |___text 'identifying number'
        |     |     |     |___text '\n        '
        |     |     |___text '\n        '
        |     |     |___element 'unit'
        |     |     |     |  \___attribute 'id' = 'microsiemens per cubic centimeter'
        |     |     |     |  \___attribute 'name' = 'microsiemens per cubic centimeter'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description'
        |     |     |     |___text '\n        '
        |     |     |___text '\n      '
        |     |___text '\n    '
        |___text '\n  '

Additional Metadata

additionalMetadata
        |___text '\n    '
        |___element 'metadata'
        |     |___text '\n      '
        |     |___element 'emlEditor'
        |     |        \___attribute 'app' = 'ezEML'
        |     |        \___attribute 'release' = '2023.08.30'
        |     |___text '\n    '
        |___text '\n  '

Copyright 2024 Environmental Data Initiative. This material is based upon work supported by the National Science Foundation under grants #2223103 and #2223104. Any opinions, findings, conclusions, or recommendations expressed in the material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation. Please contact us with questions, comments, or for technical assistance regarding this web site or the Environmental Data Initiative. Please read our privacy policy to know what information we collect about you and to understand your privacy rights.

EDI is a collaboration between the University of New Mexico and the University of Wisconsin – Madison, Center for Limnology:

Data Package Metadata View Summary

Data for Phenotypically plastic responses to freshwater salinization in larval amphibians: Induced tolerance and induced sensitivity

Data Entities

Data Table

Data Table

Data Table

Data Package Usage Rights

Keywords

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

People and Organizations

Temporal, Geographic and Taxonomic Coverage

Project

Parent Project Information:

Maintenance

Additional Metadata

Additional Metadata

Recently Added

Recently Updated

Data Package Metadata View Summary

Data for Phenotypically plastic responses to freshwater salinization in larval amphibians: Induced tolerance and induced sensitivity

+/- Data Entities

Data Table

Data Table

Data Table

+/- Data Package Usage Rights

+/- Keywords

+/- Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

+/- People and Organizations

+/- Temporal, Geographic and Taxonomic Coverage

+/- Project

Parent Project Information:

+/- Maintenance

+/- Additional Metadata

+/- Additional Metadata

Data Entities

Data Package Usage Rights

Keywords

Methods and Protocols

People and Organizations

Temporal, Geographic and Taxonomic Coverage

Project

Maintenance

Additional Metadata

Additional Metadata