Data Package Metadata   View Summary

Coastal Wetland Basal Consumer and End Member C-13 and N-15 Isotopic Ratios Across a Mangrove Encroachment Gradient, 2019

General Information
Data Package:
Local Identifier:edi.1706.1
Title:Coastal Wetland Basal Consumer and End Member C-13 and N-15 Isotopic Ratios Across a Mangrove Encroachment Gradient, 2019
Alternate Identifier:DOI PLACE HOLDER
Abstract:

Foundation species support highly productive and valuable ecosystems, but anthropogenic disturbances and environmental changes are increasingly causing foundation species shifts, where one foundation species replaces another. The consequences of foundation shifts are not well understood, as there is limited research on the equivalency of different foundation species and the functions they support. Here, we provide insight into community-level consequences of foundation shifts in the Gulf of Mexico, where the typical marsh foundation species (Spartina alterniflora) is being replaced with a mangrove foundation species (Avicennia germinans), forcing marsh fauna to rely on Avicennia for foundational support. We evaluated the interactions of two common and ecologically valuable basal consumers, fiddler crabs (Uca spp.) and marsh periwinkle snails (Littoraria irrorata), with both foundation species across sites with different levels of mangrove encroachment. By investigating both physical support, measured as habitat association and co-occurrence, and trophic support, as basal resource diet contributions, we found that Avicennia can physically replace Spartina for some consumers, but is not providing equivalent trophic support. Uca and Littoraria commonly occupy encroached sites and associate with mangroves but incorporate almost no mangrove plant matter into their diets. The ultimate consequences of a foundation shift in the case of mangrove encroachment may include shifting energy flows and resource use and decreased populations of basal consumers. Looking at interactions with foundation species from multiple perspectives is necessary to obtain a complete picture of the effects that foundational shifts are having, especially as such shifts are becoming increasingly common.

Publication Date:2024-07-10
For more information:
Visit: DOI PLACE HOLDER

Time Period
Begin:
2019
End:
2019

People and Organizations
Contact:Goeke, Janelle A (Casco Bay Estuary Partnership, Staff Scientist) [  email ]
Creator:Goeke, Janelle A (Casco Bay Estuary Partnership, Staff Scientist)

Data Entities
Data Table Name:
ABC_SIA_SamplesByType_Upload
Description:
Results of stable isotope analysis for 15N and 13C of Littoraria irrorata, Uca spp., and their potential dietary contributors in sites dominated by salt marsh vegetation, mangroves, and a mix of the two vegetation types in coastal Texas.
Detailed Metadata

Data Entities


Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/edi/1706/1/8dd8be74a2935c36f70b49b60f48a2b0
Name:ABC_SIA_SamplesByType_Upload
Description:Results of stable isotope analysis for 15N and 13C of Littoraria irrorata, Uca spp., and their potential dietary contributors in sites dominated by salt marsh vegetation, mangroves, and a mix of the two vegetation types in coastal Texas.
Number of Records:231
Number of Columns:7

Table Structure
Object Name:ABC_SIA_SamplesByType_Upload.csv
Size:11182 byte
Authentication:64119562a7ff9abb6d91bcc99de2494d Calculated By MD5
Text Format:
Number of Header Lines:1
Record Delimiter:\r\n
Orientation:column
Simple Delimited:
Field Delimiter:,
Quote Character:"

Table Column Descriptions
 Site TypeRegionSample TypeSiteSample IDdelta Ndelta C
Column Name:Site Type  
Region  
Sample Type  
Site  
Sample ID  
delta N  
delta C  
Definition:Type of marsh (salt marsh, mangrove encroached, or mixed) that sample was sourced fromCoastal RegionClassification of samples by taxa or general typeSite CodeUnique ID for each sample containing the Site Code for where the sample was sourced and a species code containing the first letter of the genus and species of the sample. A "d" in front of the species indicates the sample was sourced from dead plant matter.Ratio of N-15:N-14 isotopesRatio of C-13:C-12 isotopes
Storage Type:string  
string  
string  
string  
string  
float  
float  
Measurement Type:nominalnominalnominalnominalnominalratioratio
Measurement Values Domain:
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeMangrove
DefinitionHeavily mangrove encroached site
Source
Code Definition
CodeMarsh
DefinitionSalt marsh dominated site
Source
Code Definition
CodeMixed
DefinitionPartially mangrove encroached site with a mix of mangrove and salt marsh vegetation
Source
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeGalveston
DefinitionGalveston Region
Source
Code Definition
CodePort Aransas
DefinitionPort Aransas Region
Source
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeC3
DefinitionC3 photosynthesizers (Avicennina germinans, Borrichia frutescens, Juncus roemerianus)
Source
Code Definition
CodeFOM
DefinitionFine Organic Matter, containing both POM (particulate organic matter) and BOM (benthic organic matter)
Source
Code Definition
Codegraminoid
DefinitionGraminoids/C4 photosynthesizers (Spartina alterniflora, Distichlis spicata, Monanthochloe littoralis, Spartina patens, Spartina spartinae)
Source
Code Definition
Codeseagrass
DefinitionSeagrass (Ruppia maritima)
Source
Code Definition
Codesucculent
DefinitionSucculent plants (Batis maritima, Salicornia spp.)
Source
Code Definition
CodeLi
DefinitionLittoraria irrorata
Source
Code Definition
CodeUca
DefinitionUca spp.
Source
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeEE
DefinitionEast End
Source
Code Definition
CodeEE2
DefinitionEast End Site 2
Source
Code Definition
CodeIB
DefinitionIndian Beach
Source
Code Definition
CodeS3
DefinitionSite 3
Source
Code Definition
CodeS4
DefinitionSite 4
Source
Code Definition
CodeS9
DefinitionSite 9
Source
Code Definition
CodeSLP
DefinitionSan Luis Pass
Source
Code Definition
CodeSNC
DefinitionSunset Cove
Source
Code Definition
CodeSPM
DefinitionSportsmans Road
Source
Definitiontext
UnitParts per thousand
Typereal
UnitParts per thousand
Typereal
Missing Value Code:              
Accuracy Report:              
Accuracy Assessment:              
Coverage:              
Methods:              

Data Package Usage Rights

This information is released under the Creative Commons license - Attribution - CC BY (https://creativecommons.org/licenses/by/4.0/). The consumer of these data ("Data User" herein) is required to cite it appropriately in any publication that results from its use. The Data User should realize that these data may be actively used by others for ongoing research and that coordination may be necessary to prevent duplicate publication. The Data User is urged to contact the authors of these data if any questions about methodology or results occur. Where appropriate, the Data User is encouraged to consider collaboration or co-authorship with the authors. The Data User should realize that misinterpretation of data may occur if used out of context of the original study. While substantial efforts are made to ensure the accuracy of data and associated documentation, complete accuracy of data sets cannot be guaranteed. All data are made available "as is." The Data User should be aware, however, that data are updated periodically and it is the responsibility of the Data User to check for new versions of the data. The data authors and the repository where these data were obtained shall not be liable for damages resulting from any use or misinterpretation of the data. Thank you.

Keywords

By Thesaurus:
(No thesaurus)foundation species
LTER Controlled Vocabularymangroves, wetlands, stable isotopes, food webs

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

Methods and protocols used in the collection of this data package
Description:

To identify dietary sources consumed by Uca and Littoraria, samples for stable isotope analysis were collected by hand from five pre-determined random points along the length of the survey transect at each site. At each point, samples of Uca, Littoraria, and all likely end members (potential dietary contributors, see below) were collected. Multiple species of Uca are common in Gulf Coast salt marshes (most notably Uca rapax, Uca longisignalis, Uca panacea, and Uca spinicarpa in our sites), but the different species have similar diets in this region (Goeke and Armitage 2021), so we did not differentiate among species in our collection. Not all points had consumers present, but we were able to collect each consumer taxa from at least two points in eight of the nine sites. The exceptions were site AG2 for Littoraria and site SA2 for Uca, where we were only able to locate those consumers at a single point.

Sampled end members were particulate organic matter (POM), benthic organic material (BOM, which includes benthic microalgae and detritus), and any vascular plant species present. Macroalgae was not observed at any site so macroalgae was not included as an end member. At each of the five pre-determined points, 0.5 L of water and a scraping of the top 5 mm of sediment were collected to be processed in the lab for POM and BOM, respectively. Five live and five dead leaves were collected from each plant species present at each point to evaluate isotopic variation between live and senescent plant material. Leaves from plants of the same species in each site were combined to create a single live sample and a single dead sample per species in each site due to funding constraints. BOM and POM samples were not combined as we expected them to have higher spatial variation. A complete list of the sampled end members and sample sizes can be found in Table S1. Following collections, all samples were stored in a cooler with dry ice until they were transferred to a -20 °C freezer for storage prior to analysis.

Consumer muscle tissue was obtained from the legs and claws of Uca and from the muscular foot of Littoraria. Tissues from all individuals of a species collected at the same point in a site were combined, resulting in a maximum of five samples per species per site. Combined tissue samples were rinsed in distilled water, dried at 60°C for 48 hours, and then ground to a fine powder with a mortar and pestle. Plant leaves were rinsed thoroughly with distilled water, dried at 60 °C for 48 hours, then ground to a fine powder using a ball mill. Some samples with very small leaves (e.g., Batis maritima) were ground with a mortar and pestle to avoid sample loss that can occur with ball mills.

To isolate particulate organic matter, water samples were filtered through a 100 μm sieve onto pre-combusted glass fiber filters. Sieving removed any large detrital plant particles from the sample. Filters were dried in an oven at 60 °C for 48 hours, then stored in glass vials. Benthic organic material was separated from the sediment using density centrifugation (Levin and Currin 2012). Briefly, 15 mL of each sediment sample was rinsed twice with an equal amount of distilled water to remove salt. Twenty mL of Ludox (1.3 g/mL density) was added, and the sample was homogenized on a vortex mixer. Distilled water was carefully added without disturbing the surface of the Ludox to avoid mixing the Ludox and water layers, and the sample was centrifuged again. Following centrifugation, the organic material from the sediment, including decaying plant matter, microalgae, and benthic meiofauna, were caught at the interface of the water and Ludox layers due to the differential densities of the substances. This layer of organic material was pipetted onto a pre-combusted glass fiber filter through a 100 μm sieve to remove any larger masses of plant matter. Following filtration, the filter was dried at 60 °C for 48 hours, then stored in a glass vial.

Ground plant and animal tissues were weighed into tin capsules, and filters containing POM and BOM were placed in pre-combusted glass vials and cut into fine pieces using a pair of sterilized surgical scissors. The Vienna PeeDee Belemnite and atmospheric nitrogen were used as standards for carbon and nitrogen isotopes, respectively. The accuracy of isotopic measurements was calculated as 0.07‰ for δ13C and 0.03‰ for δ15N.

Instrument(s):Absence of carbonates was verified in a subset of POM and BOM samples via acid fumigation with 36% HCl. Stable isotope (δ13C and δ15N) analysis of most samples was performed at the Stable Isotopes for Biosphere Science (SIBS) Lab at Texas A&ampM University on a Costech elemental analyzer interfaced with a DELTA V Advantage isotope ratio mass spectrometer. A subset of 50 samples was analyzed by the UC Davis Stable Isotope Facility on a PDZ Europa ANCA-GSL elemental analyzer interfaced to a PDZ Europa 20-20 isotope ratio mass spectrometer due to an equipment malfunction at the SIBS lab. Analysis of duplicate samples showed no difference in the results produced by the labs.

People and Organizations

Publishers:
Organization:Environmental Data Initiative
Email Address:
info@edirepository.org
Web Address:
https://edirepository.org
Id:https://ror.org/0330j0z60
Creators:
Individual: Janelle A Goeke
Organization:Casco Bay Estuary Partnership
Position:Staff Scientist
Email Address:
janelle.goeke@maine.edu
Id:https://orcid.org/0000-0001-8056-4540
Contacts:
Individual: Janelle A Goeke
Organization:Casco Bay Estuary Partnership
Position:Staff Scientist
Email Address:
janelle.goeke@maine.edu
Id:https://orcid.org/0000-0001-8056-4540

Temporal, Geographic and Taxonomic Coverage

Temporal, Geographic and/or Taxonomic information that applies to all data in this dataset:

Time Period
Begin:
2019
End:
2019
Geographic Region:
Description:Coastal Texas
Bounding Coordinates:
Northern:  29.5278Southern:  27.6886
Western:  -97.3207Eastern:  -94.5911

Project

Parent Project Information:

Title:Bottom-up effects of mangrove encroachment on basal consumers
Personnel:
Individual: Janelle A Goeke
Organization:Casco Bay Estuary Partnership
Position:Staff Scientist
Email Address:
janelle.goeke@gmail.com
Id:https://orcid.org/0000-0001-8056-4540
Role:PI

Maintenance

Maintenance:
Description:

Frequency:
Other Metadata

Additional Metadata

additionalMetadata
        |___text '\n      '
        |___element 'metadata'
        |     |___text '\n         '
        |     |___element 'unitList' in ns 'http://www.xml-cml.org/schema/stmml-1.2' ('stmml:unitList')
        |     |     |___text '\n            '
        |     |     |___element 'unit' in ns 'http://www.xml-cml.org/schema/stmml-1.2' ('stmml:unit')
        |     |     |     |  \___attribute 'id' = 'Parts per thousand'
        |     |     |     |  \___attribute 'name' = 'Parts per thousand'
        |     |     |     |___text '\n               '
        |     |     |     |___element 'description' in ns 'http://www.xml-cml.org/schema/stmml-1.2' ('stmml:description')
        |     |     |     |___text '\n            '
        |     |     |___text '\n         '
        |     |___text '\n      '
        |___text '\n   '

Additional Metadata

additionalMetadata
        |___text '\n      '
        |___element 'metadata'
        |     |___text '\n         '
        |     |___element 'emlEditor'
        |     |        \___attribute 'app' = 'ezEML'
        |     |        \___attribute 'release' = '2024.07.09'
        |     |___text '\n      '
        |___text '\n   '

EDI is a collaboration between the University of New Mexico and the University of Wisconsin – Madison, Center for Limnology:

UNM logo UW-M logo