Data Package Metadata   View Summary

CVPIA Predation Contact Point Study - 2021: Impacts of Water Diversions in the Sacramento – San Joaquin Delta

General Information
Data Package:
Local Identifier:edi.1708.2
Title:CVPIA Predation Contact Point Study - 2021: Impacts of Water Diversions in the Sacramento – San Joaquin Delta
Alternate Identifier:DOI PLACE HOLDER
Abstract:

The Central Valley Project Improvement Act (CVPIA) has led to the implementation of a Decision Support Model (DSM) to assist in the prioritization of CVPIA restoration actions. The fall-run Chinook salmon (Oncorhynchus tshawytscha) DSM depends on a coarse-resolution salmon life-cycle model to predict the population benefits of different restoration actions and scenarios. One critical element of the life-cycle model is how to incorporate predation mortality during the juvenile rearing and outmigration portion of the salmon life-cycle in the Sacramento-San Joaquin Delta (the Delta). Of particular importance to potential restoration activities, is the predation mortality that occurs in proximity to, and as a result of contact points between predator and prey fishes. Water diversions that support agricultural and municipal use result in fish mortality through entrainment and impingement. Additionally, this infrastructure may attract both predators and prey fishes, thereby increasing predation rates and prey mortality near these anthropogenic contact points.

Throughout the spring of 2021, we used ARIS (adaptive resolution imaging sonar; Sound Metrics) sonars to compare piscivore abundance at 30 small water diversions in the north Delta to adjacent shorelines. We used predation event recorders (PERs) to assess the predation risk of juvenile salmonids with linear distance (m) from diversions and other predation drivers in the north Delta. Finally, we used a boat electrofishing survey to determine the piscivore community structure and compare spatial trends in black bass (Micropterus spp.) CPUE and relative abundance throughout these waterways.

Piscivore abundance was greater near small water diversions than at adjacent shorelines and the predation risk of juvenile salmonids increased with proximity to diversions. Additionally, predation risk increased with increasing piscivore abundance and decreasing water depth. The north Delta predator community was dominated by black basses (Micropterus spp.), which likely drove the negative relationship of predation risk with water depth, given habitat requirements of these species. Furthermore, increased smallmouth (Micropterus dolomieu) and Spotted Bass (Micropterus punctulatus) prevalence in our study sites compared to past Delta predation studies, may have diminished the commonly seen temperature effects on predation, given metabolic requirements of these species.

Publication:

Nelson, T. R., Lehman, B. M., Demetras, N. J., Takata, L., Young, M. J., Feyrer, F., & Michel, C. J. (2024). Anthropogenic and environmental risk factors of salmonid predation in a tidal freshwater delta. Freshwater Biology, 00, 1–17. https://doi.org/10.1111/fwb.14321

Short Name:ARIS_CountedFish
Publication Date:2024-09-16
For more information:
Visit: DOI PLACE HOLDER

Time Period
Begin:
2021-04-05
End:
2021-06-03

People and Organizations
Contact:Nelson, Thomas (Reid) (GMU / UCSC / NMFS) [  email ]
Creator:Nelson, Thomas (Reid) (GMU / UCSC / NMFS)
Associate:Michel, Cyril (UCSC / NMFS, principal investigator)
Associate:Takata, Lance (UCSC / NMFS, researcher)
Associate:Lehman, Brendan (UCSC / NMFS, researcher)
Associate:Demetras, Nicholas (UCSC / NMFS, researcher)
Associate:Feyrer, Frederick (USGS, researcher)
Associate:Young, Matthew (USGS, researcher)
Associate:Gonzalez(US Fish and Wildlife Service, CVPIA Data Manager, CVPIA Data Manager)

Data Entities
Data Table Name:
ARIS_CountedFish.csv
Description:
Fish count and tracking data collected from ARIS video review - 2021
Data Table Name:
ARIS_Deployment.csv
Description:
ARIS camera deployment data including recording times and site information - 2021
Data Table Name:
ARIS_VideoReview_V2
Description:
2021 data from ARIS video reviews
Data Table Name:
Electrofishing_Sample_Table_NOAA.csv
Description:
Table of 2021 electrofishing sampling conditions
Data Table Name:
PER_conditions.csv
Description:
Anthropogenic and environmental drivers of 2021 salmonid predation in a tidal freshwater delta
Data Table Name:
PER_trackpoints_w_variables.csv
Description:
PER deployment tracks and data recorded
Other Name:
ARIS_analysis
Description:
R programs for analyzing ARIS data.
Other Name:
Electrofishing_analysis
Description:
R programs for analyzing electrofishing data.
Other Name:
PER_analysis
Description:
R programs for analyzing PER data.
Detailed Metadata

Data Entities


Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/edi/1708/2/e52f3814574c8c854e596add60458658
Name:ARIS_CountedFish.csv
Description:Fish count and tracking data collected from ARIS video review - 2021
Number of Records:5591
Number of Columns:14

Table Structure
Object Name:ARIS_CountedFish.csv
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Table Column Descriptions
 reviewerarisdatetime_in_framefish_enterfish_exitvideo_idfish_length_mavg_distanceschool_sizeschool_FL_avgnotessecond_reviewsecond_review
Column Name:reviewer  
aris  
date  
total_time_in_frame  
fish_enter  
fish_exit  
video_id  
fish_length_m  
avg_distance  
school_size  
school_fl_avg  
notes  
second_review  
review_round  
Definition:Initials of video reviewer. If followed by "Round 2", this represents the 2nd review of a video file by a secondary reviewer for calibrationARIS used for video collectionDate of video collectionTotal amount of time fish was in the frameTime stamp of when fish enters video frameTime stamp of when fish exits video frameName of video fileEstimated fork length in metersAverage distance fish was from camera during time in frame.Number of fish in school if multiple fish were in a school.Average fork length in meters of all fish within the schoolNotes or commentary for dataIndicates if data is from a second review of video file for calibrationIndicates if a video review is the first review (1), or the second review (2)
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Unitmeter
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Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/edi/1708/2/15c1aa2ed3cd08fcaa5aa0db5417c398
Name:ARIS_Deployment.csv
Description:ARIS camera deployment data including recording times and site information - 2021
Number of Records:58
Number of Columns:9

Table Structure
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Table Column Descriptions
 datesite_idarispasspass_typebanksidestart_timeend_timenotes
Column Name:date  
site_id  
aris  
pass  
pass_type  
bankside  
start_time  
end_time  
notes  
Definition:Date of ARIS deploymentSite ID where ARIS was deployedARIS camera used for deploymentType of deploymentType of sampling site ARIS camera was deployed atDetermines whether or not the sampling site was located by the banksideTime at start of ARIS recordingTime at end of ARIS recordingNotes about ARIS camera deployment or recording
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Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/edi/1708/2/ac980f962de64d857983b5c7e5c7ed6a
Name:ARIS_VideoReview_V2
Description:2021 data from ARIS video reviews
Number of Records:486
Number of Columns:14

Table Structure
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Table Column Descriptions
 sample_datearisreview_roundvideo_lengthvideo_idvideo_start_timevideo_end_timereview_datecompletedfish_presentdiversion_distancerevieweractual_timenotes
Column Name:sample_date  
aris  
review_round  
video_length  
video_id  
video_start_time  
video_end_time  
review_date  
completed  
fish_present  
diversion_distance  
reviewer  
actual_time  
notes  
Definition:Sample dateARIS camera used during data collectionRound of reviewLength of video fileVideo file nameTime of day that video file startsTime of day that video file endsDate video file was reviewedDetermination on whether or not a video review is complete. TRUE = Video review is complete. FALSE = Video review is not complete.Determination on wether or not fish arepresent in the video. TRUE = Fish are present. FALSE = Fish are absent.Distance of camera to diversionInitials of reviewerManually edited start/stop timeNotes about video file or review
Storage Type:dateTime  
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Code Definition
CodeTRUE
DefinitionVideo review is complete
Source
Code Definition
CodeFALSE
DefinitionVideo review is not complete
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CodeFALSE
DefinitionFish are absent
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DefinitionFish are present
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Accuracy Assessment:                            
Coverage:                            
Methods:                            

Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/edi/1708/2/8b07d20eedd4add25e020d5a4e30d829
Name:Electrofishing_Sample_Table_NOAA.csv
Description:Table of 2021 electrofishing sampling conditions
Number of Records:377
Number of Columns:30

Table Structure
Object Name:Electrofishing_Sample_Table_NOAA.csv
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Table Column Descriptions
 Sample NumberSample DateStart TimeEnd TimeRegionDepth 1 mDepth 2 mDepth 3 mTideSampling gearElectrofish Sample TypePass IDPass NumberLatitude StartLongitude StartLatitude EndLongitude EndGill Net Duration minTransect Length mShocking SecondsWind speedWind directionSkyPrecipitationTempSpecific conductance us_cmTurbidity FNUCommentpercentage_of_transect_with_submerged_aquatic_vegitationNOAA Comparison
Column Name:sample_number  
sample_date  
start_time  
end_time  
region  
depth_1_m  
depth_2_m  
depth_3_m  
tide  
sampling_gear  
electrofish_sample_type  
pass_id  
pass_number  
latitude_start  
longitude_start  
latitude_end  
longitude_end  
gill_net_duration_min  
transect_length_m  
shocking_seconds  
wind_speed  
wind_direction  
sky  
precipitation  
temperature  
specific_conductance_us_cm  
turbidity_fnu  
comment  
percent_aquatic_vegitation  
noaa_comparison  
Definition:Sample number for sample passDate sampling conductedTime sampling startedTime sampling endedRegion of the Delta sampledDepth at 1m from bankDepth at 2m from bankDepth at 3m from bankType of tide current at time of samplingSampling gear used for samplingType of electrofishing sampling conductedID for pass conductedPass number being sampled at the siteLatitude at start of samplingLongitude at start of samplingLatitude at end of samplingLongitude at end of samplingDuration that gill net was deployed forLength of transect sampledTotal seconds that shock was applied for during sampling periodWind speed during samplingWind direction during samplingSky conditions during samplingType of precipitation during samplingWater temperature during samplingSpecific conductivity of water during samplingTurbidity of water during samplingCommentVisual estimate of amount of submerged aquatic vegetation coverage across sample siteDetermines whether or not electrofishing sites have spatial overlap of ARIS and PER study
Storage Type:string  
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Measurement Type:nominaldateTimedateTimedateTimenominalratioratiorationominalnominalnominalnominalratioratioratioratioratioratioratiorationominalnominalnominalnominalratioratiorationominalrationominal
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Unitmeter
Typereal
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Max14 
Unitmeter
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Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeEbb
DefinitionOutgoing (oceanward) water movement associated with a dropping tide.
Source
Code Definition
CodeFlood
DefinitionIncoming (landward) water movement associate with a rising tide.
Source
Code Definition
CodeHigh slack
DefinitionNo water movement at the top of the high tide.
Source
Code Definition
CodeLow slack
DefinitionNo water movement at the bottom of the high tide.
Source
Definitiontext
Definitiontext
Definitiontext
UnitPass number
Typenatural
Min
Max
UnitDegrees
Typereal
Min38.130299999999998 
Max38.304499999999997 
UnitDegrees
Typereal
Min-121.65979 
Max-121.51716999999999 
UnitDegrees
Typereal
Min38.129800000000003 
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UnitDegrees
Typereal
Min-121.66463 
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Typewhole
Min12 
Max66 
Unitmeter
Typereal
Min35 
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Unitsecond
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Code Definition
Code0-1
DefinitionGlassy - 0-1 miles per hour
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Code Definition
Code1-5
DefinitionLight ripples - 1-5 miles per hour
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Code Definition
Code10-15
DefinitionModerate waves, occasional whitecaps - 10-15 miles per hour
Source
Code Definition
Code15-20
DefinitionLarge waves, frequent whitecaps - 15-20 miles per hour
Source
Code Definition
Code20+
DefinitionLarge waves, heavy whitecaps, spray - 20+ miles per hour
Source
Code Definition
Code5-10
DefinitionSmall waves - 5-10 miles per hour
Source
Definitiontext
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Unitcelsius
Typereal
Min8.81 
Max19.100000000000001 
UnitmicrosiemensPerCentimeter
Typereal
Min93 
Max230.6 
UnitFormazin Nephelometric Units
Typereal
Min0.8 
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Definitiontext
Unitpercent
Typereal
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Accuracy Report:                                                            
Accuracy Assessment:                                                            
Coverage:                                                            
Methods:                                                            

Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/edi/1708/2/d2d0ecde3454cd7863111fc6577017d1
Name:PER_conditions.csv
Description:Anthropogenic and environmental drivers of 2021 salmonid predation in a tidal freshwater delta
Number of Records:33
Number of Columns:10

Table Structure
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Table Column Descriptions
 sample_datesitecrewdiversion_circumference_cmdiversion_latitudediversion_longitudediversion_operatingdiversion_operation_notesdiversion_picturenotes
Column Name:sample_date  
site  
crew  
diversion_circumference_cm  
diversion_latitude  
diversion_longitude  
diversion_operating  
diversion_operation_notes  
diversion_picture  
notes  
Definition:Date of samplingSite name sampledInitials of crew personnel present during samplingCircumference of diversion at siteLatitude coordinates of diversionLongitude coordinates of diversionStatus of diversion pump. on = diversion pump is on, off = diversion pump is offOperational status of diversionDetermines if a picture of the diversion was takenNotes
Storage Type:dateTime  
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Typereal
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Typereal
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Code Definition
Codeoff
DefinitionDiversion pump is off
Source
Code Definition
Codeon
DefinitionDiversion pump is on
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Definitiontext
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CodeFALSE
DefinitionDiversion picture was taken
Source
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DefinitionDiversion picture was not taken
Source
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Coverage:                    
Methods:                    

Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/edi/1708/2/dffaa884bff90bf69097198ed9a95405
Name:PER_trackpoints_w_variables.csv
Description:PER deployment tracks and data recorded
Number of Records:406128
Number of Columns:23

Table Structure
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Table Column Descriptions
 DeploymentIDtime_stampdaySiteLatLonpredationregionTempCTurb_NTUstart_PDTend_PDTshinertether_speeddist_divdist_shoreStage_interpTime.Stamp_PDTtPssDepth_mDepth_m_2mPERprd_cnt
Column Name:deployment_id  
time_stamp  
day  
site  
latitude  
longitude  
predation  
region  
temperature_c  
turbidity_ntu  
start_pdt  
end_pdt  
shiner  
tether_speed  
distance_diversion  
distance_shore  
stage_interpolated  
time_stamp_pdt  
tpss  
depth_m  
depth_m_2  
mper  
prd_cnt  
Definition:Unique identifier for each PER or mPER deploymentTimestamp of deployment in GMT timezoneDate of deploymentSite of deploymentLatitude of deploymentLongitude of deploymentPredation status, either 1 or 0/Yes or NoRegion of deploymentTemperature from deployed HydrolabTurbidity from deployed HydrolabTether deployment time in Pacific daylight timeTether retrieval time in Pacific daylight timeWhether a golden shiner was used as bait, a 1 or 0 for yes or notether speed in m/s, calculated using GPS using moving 1 min window (30 seconds on either side of each trackpoint)Distance in meters from closest diversionDistance in meters from shoreRiver stage from nearest river gauge (feet above sea level)time stamp in pacific daylight timeTime past sunset in minutesPER depth in meters, based off kriging of bathymetry transects of sitesPER depth in meters, based off DEM model at 2m resolutionif an mPER was used, a 1 or 0 for yes or noMean 30 minute predator count from ARIS footage of adjacent diversion and control sites
Storage Type:string  
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Definitionpredation occurred
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Definitionpredation did not occur
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Code Definition
Code1
Definitiongolden shiner used as bait
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Code Definition
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Definitiongolden shiner not used as bait
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Typereal
Min0.1544 
Max196.0306 
Unitmeter
Typereal
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Max31.0808 
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Typeinteger
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DefinitionYes/TRUE
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Definitionno/FALSE
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Accuracy Report:                                              
Accuracy Assessment:                                              
Coverage:                                              
Methods:                                              

Non-Categorized Data Resource

Name:ARIS_analysis
Entity Type:.R
Description:R programs for analyzing ARIS data.
Physical Structure Description:
Object Name:ARIS_analysis.R
Size:16953 byte
Authentication:ad2e12d1ccfa393e9261e6ecb6044780 Calculated By MD5
Externally Defined Format:
Format Name:.R
Data:https://pasta-s.lternet.edu/package/data/eml/edi/1708/2/1029aa0bf2dd0606f1ac212a5eeaf64a

Non-Categorized Data Resource

Name:Electrofishing_analysis
Entity Type:.R
Description:R programs for analyzing electrofishing data.
Physical Structure Description:
Object Name:Electrofishing_analysis.R
Size:17992 byte
Authentication:e364da04386e5d0ce491e05d5a134342 Calculated By MD5
Externally Defined Format:
Format Name:.R
Data:https://pasta-s.lternet.edu/package/data/eml/edi/1708/2/f63e1b091d8a00ce30a083cc08f421ce

Non-Categorized Data Resource

Name:PER_analysis
Entity Type:.R
Description:R programs for analyzing PER data.
Physical Structure Description:
Object Name:PER_analysis.R
Size:42464 byte
Authentication:e1ae2396b1efc63e288811f84c421ce3 Calculated By MD5
Externally Defined Format:
Format Name:.R
Data:https://pasta-s.lternet.edu/package/data/eml/edi/1708/2/ad0f5689d896967d7d84ad1bcf190f5b

Data Package Usage Rights

This data package is released to the "public domain" under Creative Commons CC0 1.0 "No Rights Reserved" (see: https://creativecommons.org/publicdomain/zero/1.0/). It is considered professional etiquette to provide attribution of the original work if this data package is shared in whole or by individual components. A generic citation is provided for this data package on the website https://portal.edirepository.org (herein "website") in the summary metadata page. Communication (and collaboration) with the creators of this data package is recommended to prevent duplicate research or publication. This data package (and its components) is made available "as is" and with no warranty of accuracy or fitness for use. The creators of this data package and the website shall not be liable for any damages resulting from misinterpretation or misuse of the data package or its components. Periodic updates of this data package may be available from the website. Thank you.

Keywords

By Thesaurus:
(No thesaurus)CVPIA, Chinook
LTERfishes, ecology, predation, estuaries, rivers, restoration

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

Methods and protocols used in the collection of this data package
Description:

Methods

A total of 30 small water diversions, 10 in each of Steamboat Slough, Georgiana Slough, and Sacramento River, were sampled. Each diversion was assigned a study reach, spanning 200m along-river x 15m cross-river, marked out by buoys and floating lines. Each study reach was sampled continuously from 17:00 to 21:00 (Pacific Time) using Predation Event Recorders (PERs; Demetras et al. 2016) and Adaptive Resolution Imaging Sonar (ARIS) on a single day.

PER Data

Predation Event Recorders (PERs) are free floating platforms that record GPS position, time, date and predation state (i.e., predated or not) of tethered prey. Functionally the same, miniaturized PERs (mPERs; Demetras et al. 2023) were also used in this study and are small enough to be cast from a fishing pole. Each PER and mPER was baited with live hatchery-origin juvenile Chinook salmon (mean FL = 80.27mm) at 1m depth using fluorocarbon fishing line and lead split shots. Due to rising water temperatures later in the study, golden shiners (Notemigonus, crysoleucas), a similar sized fish, was substituted as prey on the PERs and mPERs. PERs were deployed approximately every 30 seconds in batches of ~15 at the top of a reach. They were allowed to naturally float to the end of the reach where they would be collected. PERs would then be redeployed at the top of the reach after assessing tethered prey condition, with individuals not being used more than three times. Meanwhile mPERs were cast and retrieved repeatedly via fishing pole from a boat anchored nearby the diversion so as to increase sampling resolution in the area immediately around the diversion.

ARIS Data

We deployed two boat mounted Adaptive Resolution Imaging Sonar (ARIS) cameras from a single tethered boat at each sampling reach. One camera was directed at the water diversion and the other towards an adjacent shoreline. Each camera recorded footage continuously during the sampling period concurrently with PER deployments. Camera settings used were as follows, Receiver Gain: 12dB, Range: 2-15m, Focus: ~8m, Depth: ~1m, Orientation: down angle ~8-15 degrees from horizontal.

Electrofishing Data

To quantify distribution and stomach contents of piscivorous fish in the same study area, the United States Geological Survey conducted electrofishing surveys from May, 2020-2022. Much of this data is hosted at https://doi.org/10.5066/P9LN77LW, with the exception of the “Electrofishing_Sample_Table_NOAA” file and “Electrofishing_analysis” R script, included here. Each survey consisted of a 300m single pass electrofishing transect, after which all fish were identified, enumerated, and measured. Any Micropterus species caught were retained for diet content analysis.

R Scripts - ARIS

ARIS_analysis – Analysis and creation of figures from ARIS footage review data.

R Scripts - Electrofishing

Electrofishing_analysis – Analysis and creation of figures from USGS electrofishing data (Clause et al. 2023)

R Scripts - PERS

PER_analysis - Analysis of PER data and creation of figures

People and Organizations

Publishers:
Organization:Environmental Data Initiative
Email Address:
info@edirepository.org
Web Address:
https://edirepository.org
Id:https://ror.org/0330j0z60
Creators:
Individual: Thomas (Reid) Nelson
Organization:GMU / UCSC / NMFS
Email Address:
tnelso3@gmu.edu
Id:https://orcid.org/0000-0002-7960-2084
Contacts:
Individual: Thomas (Reid) Nelson
Organization:GMU / UCSC / NMFS
Email Address:
tnelso3@gmu.edu
Id:https://orcid.org/0000-0002-7960-2084
Associated Parties:
Individual: Cyril Michel
Organization:UCSC / NMFS
Email Address:
cyril.michel@noaa.gov
Role:principal investigator
Individual: Lance Takata
Organization:UCSC / NMFS
Email Address:
lance.takata@noaa.gov
Role:researcher
Individual: Brendan Lehman
Organization:UCSC / NMFS
Email Address:
brendan.lehman@noaa.gov
Role:researcher
Individual: Nicholas Demetras
Organization:UCSC / NMFS
Email Address:
nicholas.demetras@noaa.gov
Role:researcher
Individual: Frederick Feyrer
Organization:USGS
Email Address:
ffeyrer@usgs.gov
Role:researcher
Individual: Matthew Young
Organization:USGS
Email Address:
mjyoung@usgs.gov
Role:researcher
Individual: Gonzalez
Organization:US Fish and Wildlife Service
Position:CVPIA Data Manager
Email Address:
alin_gonzalezbarnes@fws.gov
Id:https://orcid.org/0000-0003-4041-0496
Role:CVPIA Data Manager

Temporal, Geographic and Taxonomic Coverage

Temporal, Geographic and/or Taxonomic information that applies to all data in this dataset:

Time Period
Begin:
2021-04-05
End:
2021-06-03
Geographic Region:
Description:north Sacramento-San Joaquin Delta
Bounding Coordinates:
Northern:  38.3046Southern:  38.163
Western:  -121.6455Eastern:  -121.5184
Taxonomic Range:
Classification:
Rank Name:kingdom
Rank Value:Animalia
Classification:
Rank Name:phylum
Rank Value:Chordata
Classification:
Rank Name:class
Rank Value:Teleostei
Classification:
Rank Name:order
Rank Value:Salmoniformes
Classification:
Rank Name:family
Rank Value:Salmonidae
Classification:
Rank Name:genus
Rank Value:Oncorhynchus
Classification:
Rank Name:species
Rank Value:Oncorhynchus tshawytscha
Common Name:Chinook Salmon
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: 161980 (Oncorhynchus tshawytscha)
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Alosa
Classification:
Rank Name:sapidissima
Common Name:American Shad
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Percina
Classification:
Rank Name:macrolepida
Common Name:Bigscale Logperch
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Ameiurus
Classification:
Rank Name:melas
Common Name:Black Bullhead
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Pomoxis
Classification:
Rank Name:nigromaculatus
Common Name:Black Crappie
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Lucania
Classification:
Rank Name:goodei
Common Name:Bluefin Killifish
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Lepomis
Classification:
Rank Name:macrochirus
Common Name:Bluegill Sunfish
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Ameiurus
Classification:
Rank Name:nebulosus
Common Name:Brown Bullhead
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Ictalurus
Classification:
Rank Name:punctatus
Common Name:Channel Catfish
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Cyprinus
Classification:
Rank Name:carpio
Common Name:Common Carp
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Notemigonus
Classification:
Rank Name:crysoleucas
Common Name:Golden Shiner
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Lepomis
Classification:
Rank Name:cyanellus
Common Name:Green Sunfish
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Lavinia
Classification:
Rank Name:exilicauda
Common Name:Hitch
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Menidia
Classification:
Rank Name:beryllina
Common Name:Inland Silverside
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Micropterus
Classification:
Rank Name:salmoides
Common Name:Largemouth Bass
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Lampetra
Classification:
Rank Name:tridentata
Common Name:Pacific Lamprey
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Leptocottus
Classification:
Rank Name:armatus
Common Name:Pacific Staghorn Sculpin
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Cottus
Classification:
Rank Name:asper
Common Name:Prickly Sculpin
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Oncorhynchus
Classification:
Rank Name:mykiss
Common Name:Rainbow / Steelhead Trout
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Lucania
Classification:
Rank Name:parva
Common Name:Rainwater Killifish
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Lepomis
Classification:
Rank Name:microlophus
Common Name:Redear Sunfish
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Micropterus
Classification:
Rank Name:coosae
Common Name:Redeye Bass
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Lampetra
Classification:
Rank Name:ayresi
Common Name:River Lamprey
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Ptychocheilus
Classification:
Rank Name:grandis
Common Name:Sacramento Pikeminnow
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Pogonichthys
Classification:
Rank Name:macrolepidotus
Common Name:Sacramento Splittail
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Catostomus
Classification:
Rank Name:occidentalis
Common Name:Sacramento Sucker
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Tridentiger
Classification:
Rank Name:bifasciatus
Common Name:Shimofuri Goby
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Micropterus
Classification:
Rank Name:dolomieu
Common Name:Smallmouth Bass
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Micropterus
Classification:
Rank Name:punctulatus
Common Name:Spotted Bass
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Morone
Classification:
Rank Name:saxatilis
Common Name:Striped Bass
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Dorosoma
Classification:
Rank Name:petenense
Common Name:Threadfin Shad
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Gasterosteus
Classification:
Rank Name:aculeatus
Common Name:Threespine Stickleback
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Hysterocarpus
Classification:
Rank Name:traskii
Common Name:Tule Perch
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Lepomis
Classification:
Rank Name:gulosus
Common Name:Warmouth
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Gambusia
Classification:
Rank Name:affinis
Common Name:Western Mosquitofish
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Ameiurus
Classification:
Rank Name:catus
Common Name:White Catfish
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Pomoxis
Classification:
Rank Name:annularis
Common Name:White Crappie
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()
Taxonomic Range:
Classification:
Rank Value:Animalia
Classification:
Rank Value:Chordata
Classification:
Classification:
Classification:
Classification:
Rank Name:Acanthogobius
Classification:
Rank Name:flavimanus
Common Name:Yellowfin Goby
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: ()

Project

Parent Project Information:

Title:CVPIA Predation Contact Point Study - 2021: Impacts of Water Diversions in the Sacramento – San Joaquin Delta
Personnel:
Individual: Thomas (Reid) Nelson
Organization:GMU / UCSC / NMFS
Email Address:
tnelso3@gmu.edu
Role:Project Lead
Individual: Cyril Michel
Organization:UCSC / NMFS
Email Address:
cyril.michel@noaa.gov
Role:principal investigator
Individual: Lance Takata
Organization:UCSC / NMFS
Email Address:
lance.takata@noaa.gov
Role:researcher
Individual: Brendan Lehman
Organization:UCSC / NMFS
Email Address:
brendan.lehman@noaa.gov
Role:researcher
Individual: Nicholas Demetras
Organization:UCSC / NMFS
Email Address:
nicholas.demetras@noaa.gov
Role:researcher
Individual: Frederick Feyrer
Organization:USGS
Email Address:
ffeyrer@usgs.gov
Role:researcher
Individual: Matthew Young
Organization:USGS
Email Address:
mjyoung@usgs.gov
Role:researcher
Individual: Alin Gonzalez
Organization:US Fish and Wildlife Service
Position:CVPIA Data Manager
Email Address:
alin_gonzalezbarnes@fws.gov
Id:https://orcid.org/0000-0003-4041-0496
Role:CVPIA Data Manager
Additional Award Information:
Funder:CVPIA
Number:R18AP00136
Title:Assessing the Impacts of Different Contact Points on Predation-Related Mortality of Juvenile Chinook Salmon in the Sacramento-San Joaquin Delta
Related Project:
Title:Final ARIS Data and Predation Event Recorder Data from Contact Point Experiments in the Sacramento - San Joaquin Delta
Personnel:
Individual: Thomas (Reid) Nelson
Organization:UCSC / NMFS
Email Address:
thomas.nelson@noaa.gov
Id:https://orcid.org/0000-0002-7960-2084
Role:Project Lead
Additional Award Information:
Funder:United States Bureau of Reclamation
Funder ID:TBD
Number:R18AP00136
Title:Assessing the Impacts of Different Contact Points on Predation-Related Mortality of Juvenile Chinook Salmon in the Sacramento-San Joaquin Delta
Related Project:
Title:CVPIA Predation Contact Point Study - 2019: Impacts of Artificial Light At Night in the Sacramento – San Joaquin Delta
Personnel:
Individual: Thomas (Reid) Nelson
Organization:UCSC / NMFS
Email Address:
thomas.nelson@noaa.gov
Role:creator
Individual: Thomas (Reid) Nelson
Organization:UCSC / NMFS
Email Address:
thomas.nelson@noaa.gov
Role:project lead
Individual: Cyril Michel
Organization:UCSC / NMFS
Email Address:
cyril.michel@noaa.gov
Role:principal investigator
Individual: Meagan Gary
Organization:UCSC / NMFS
Email Address:
meagan.gary@noaa.gov
Role:researcher
Individual: Brendan Lehman
Organization:UCSC / NMFS
Email Address:
brendan.lehman@noaa.gov
Role:researcher
Individual: Nicholas Demetras
Organization:UCSC / NMFS
Email Address:
nicholas.demetras@noaa.gov
Role:researcher
Individual: Michael Horn
Organization:USBR
Email Address:
mhorn@usbr.gov
Role:researcher
Individual: Jeremy Hammen
Organization:USBR
Email Address:
jhammen@usbr.gov
Role:researcher
Organization:Environmental Data Initiative
Email Address:
info@edirepository.org
Web Address:
https://edirepository.org
Id:https://ror.org/0330j0z60
Role:Data Curator
Individual: Thomas (Reid) Nelson
Organization:UCSC / NMFS
Email Address:
thomas.nelson@noaa.gov
Role:Project Lead
Related Project:
Title:Assessing the Impacts of Different Contact Points on Predation-Related Mortality of Juvenile Chinook Salmon in the Sacramento-San Joaquin Delta
Personnel:
Individual: Thomas (Reid) Nelson
Organization:UCSC / NMFS
Email Address:
thomas.nelson@noaa.gov
Id:https://orcid.org/0000-0002-7960-2084
Role:creator
Individual: Thomas (Reid) Nelson
Organization:UCSC / NMFS
Email Address:
thomas.nelson@noaa.gov
Id:https://orcid.org/0000-0002-7960-2084
Role:creator
Individual: Cyril Michel
Organization:UCSC / NMFS
Email Address:
cyril.michel@noaa.gov
Id:https://orcid.org/0000-0002-1198-3837
Role:principal investigator
Individual: Meagan Gary
Organization:UCSC / NMFS
Email Address:
meagan.gary@noaa.gov
Role:researcher
Individual: Brendan Lehman
Organization:UCSC / NMFS
Email Address:
brendan.lehman@noaa.gov
Role:researcher
Individual: Nicholas Demetras
Organization:UCSC / NMFS
Email Address:
nicholas.demetras@noaa.gov
Role:researcher
Individual: Michael Horn
Organization:USBR
Email Address:
mhorn@usbr.gov
Role:researcher
Individual: Jeremy Hammen
Organization:USBR
Email Address:
jhammen@usbr.gov
Role:researcher
Individual: Thomas (Reid) Nelson
Organization:UCSC / NMFS
Email Address:
thomas.nelson@noaa.gov
Id:https://orcid.org/0000-0002-7960-2084
Role:Project Lead
Additional Award Information:
Funder:United States Bureau of Reclamation
Funder ID:TBD
Number:R18AP00136
Title:Assessing the Impacts of Different Contact Points on Predation-Related Mortality of Juvenile Chinook Salmon in the Sacramento-San Joaquin Delta
Additional Award Information:
Funder:United States Bureau of Reclamation
Funder ID:TBD
Number:R18AP00136
Title:Assessing the Impacts of Different Contact Points on Predation-Related Mortality of Juvenile Chinook Salmon in the Sacramento-San Joaquin Delta

Maintenance

Maintenance:
Description:

Complete

Frequency:
Other Metadata

Additional Metadata

additionalMetadata
        |___text '\n      '
        |___element 'metadata'
        |     |___text '\n         '
        |     |___element 'fetchedFromEDI'
        |     |        \___attribute 'dateFetched' = '2024-09-13'
        |     |        \___attribute 'packageID' = 'edi.1708.1'
        |     |___text '\n      '
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Additional Metadata

additionalMetadata
        |___text '\n      '
        |___element 'metadata'
        |     |___text '\n         '
        |     |___element 'importedFromXML'
        |     |        \___attribute 'dateImported' = '2024-09-13'
        |     |        \___attribute 'filename' = 'edi.1708.1.xml'
        |     |        \___attribute 'taxonomicCoverageExempt' = 'True'
        |     |___text '\n      '
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Additional Metadata

additionalMetadata
        |___text '\n      '
        |___element 'metadata'
        |     |___text '\n         '
        |     |___element 'unitList' in ns 'http://www.xml-cml.org/schema/stmml-1.2' ('stmml:unitList')
        |     |     |___text '\n            '
        |     |     |___element 'unit' in ns 'http://www.xml-cml.org/schema/stmml-1.2' ('stmml:unit')
        |     |     |     |  \___attribute 'id' = 'Pass number'
        |     |     |     |  \___attribute 'name' = 'Pass number'
        |     |     |     |___text '\n               '
        |     |     |     |___element 'description' in ns 'http://www.xml-cml.org/schema/stmml-1.2' ('stmml:description')
        |     |     |     |     |___text 'pass number'
        |     |     |     |___text '\n            '
        |     |     |___text '\n            '
        |     |     |___element 'unit' in ns 'http://www.xml-cml.org/schema/stmml-1.2' ('stmml:unit')
        |     |     |     |  \___attribute 'id' = 'Degrees'
        |     |     |     |  \___attribute 'name' = 'Degrees'
        |     |     |     |___text '\n               '
        |     |     |     |___element 'description' in ns 'http://www.xml-cml.org/schema/stmml-1.2' ('stmml:description')
        |     |     |     |     |___text 'coordinate degrees'
        |     |     |     |___text '\n            '
        |     |     |___text '\n            '
        |     |     |___element 'unit' in ns 'http://www.xml-cml.org/schema/stmml-1.2' ('stmml:unit')
        |     |     |     |  \___attribute 'id' = 'microsiemensPerCentimeter'
        |     |     |     |  \___attribute 'name' = 'microsiemensPerCentimeter'
        |     |     |     |___text '\n               '
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        |     |     |     |     |___text 'microsiemensPerCentimeter'
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        |     |     |___element 'unit' in ns 'http://www.xml-cml.org/schema/stmml-1.2' ('stmml:unit')
        |     |     |     |  \___attribute 'id' = 'Formazin Nephelometric Units'
        |     |     |     |  \___attribute 'name' = 'Formazin Nephelometric Units'
        |     |     |     |___text '\n               '
        |     |     |     |___element 'description' in ns 'http://www.xml-cml.org/schema/stmml-1.2' ('stmml:description')
        |     |     |     |     |___text 'Formazin Nephelometric Units'
        |     |     |     |___text '\n            '
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        |     |     |___element 'unit' in ns 'http://www.xml-cml.org/schema/stmml-1.2' ('stmml:unit')
        |     |     |     |  \___attribute 'id' = 'NTU'
        |     |     |     |  \___attribute 'name' = 'NTU'
        |     |     |     |___text '\n               '
        |     |     |     |___element 'description' in ns 'http://www.xml-cml.org/schema/stmml-1.2' ('stmml:description')
        |     |     |     |     |___text 'turbidity Nephelometric Turbidity Units'
        |     |     |     |___text '\n            '
        |     |     |___text '\n            '
        |     |     |___element 'unit' in ns 'http://www.xml-cml.org/schema/stmml-1.2' ('stmml:unit')
        |     |     |     |  \___attribute 'id' = 'Large Fish/meter^3/30 minutes'
        |     |     |     |  \___attribute 'name' = 'Large Fish/meter^3/30 minutes'
        |     |     |     |___text '\n               '
        |     |     |     |___element 'description' in ns 'http://www.xml-cml.org/schema/stmml-1.2' ('stmml:description')
        |     |     |     |     |___text 'Large Fish/meter^3/30 minutes'
        |     |     |     |___text '\n            '
        |     |     |___text '\n            '
        |     |     |___element 'unit' in ns 'http://www.xml-cml.org/schema/stmml-1.2' ('stmml:unit')
        |     |     |     |  \___attribute 'id' = 'Number of Fish'
        |     |     |     |  \___attribute 'name' = 'Number of Fish'
        |     |     |     |___text '\n               '
        |     |     |     |___element 'description' in ns 'http://www.xml-cml.org/schema/stmml-1.2' ('stmml:description')
        |     |     |     |___text '\n            '
        |     |     |___text '\n         '
        |     |___text '\n      '
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Additional Metadata

additionalMetadata
        |___text '\n      '
        |___element 'metadata'
        |     |___text '\n         '
        |     |___element 'emlEditor'
        |     |        \___attribute 'app' = 'ezEML'
        |     |        \___attribute 'release' = '2024.09.11'
        |     |___text '\n      '
        |___text '\n   '

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