Data Package Metadata   View Summary

Soil moisture data across a Florida scrub and sandhill landscape collected from 1998-2018 at Archbold Biological Station

General Information
Data Package:
Local Identifier:edi.251.6
Title:Soil moisture data across a Florida scrub and sandhill landscape collected from 1998-2018 at Archbold Biological Station
Alternate Identifier:DOI PLACE HOLDER
Abstract:

This project was initiated 1998 to examine the variation in percent soil moisture in relation to rainfall, vegetation type, gaps, and time-since-fire in upland habitats at Archbold Biological Station, in south-central Florida. Data were collected from 78 sampling points across four vegetation types (rosemary scrub, scrubby flatwoods, oak-hickory scrub and sandy roadsides) with different time-since-fires (2-3 years or >20 years post-fire). In January 2006, 30 additional sampling points were added to include a fourth vegetation type (southern ridge sandhill). Data were collected at three depths below the soil surface (10, 50 and 90 cm) weekly (1 October 1998 – 9 June 1999), then bi-weekly (23 June 1999 – 3 October 2001), monthly (17 October 2001 – 15 June 2011), and every other month thereafter until the project ended on 16 July 2018.

Publication Date:2019-01-03

Time Period
Begin:
1998
End:
2018

People and Organizations
Contact:Data Manager (Archbold Biological Station) [  email ]
Creator:Weekley, Carl W (Archbold Biological Station)
Associate:Kamener, Gabriel E (Archbold Biological Station, Data Archiver)

Data Entities
Data Table Name:
soil_moisture_data.csv
Description:
Soil-moisture data
Data Table Name:
ABS_SoilMoistTubesWithElevation.csv
Description:
Soil-moisture-tube location and elevation data
Other Name:
ABS_SoilMoistTubesWithElevationShape.zip
Description:
Soil-moisture-tube shape files
Detailed Metadata

Data Entities


Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/edi/251/6/a53b89d0c1bb899c83f30da862881d90
Name:soil_moisture_data.csv
Description:Soil-moisture data
Number of Records:62334
Number of Columns:8

Table Structure
Object Name:soil_moisture_data.csv
Size:1860333 byte
Authentication:179d526e2efccdc7322ab149036f18a1 Calculated By MD5
Text Format:
Number of Header Lines:1
Record Delimiter:\r\n
Orientation:column
Simple Delimited:
Field Delimiter:,
Quote Character:"

Table Column Descriptions
 
Column Name:date  
tube  
habitat  
depth  
percent_soilmoisture  
comments  
burn98  
gap98  
Definition:Data collection datePVC tube numberVegetation typeDepth (cm) below soil surface of measurementPercent moisture; adjusted soil water by volumenotes made during data collectionIn 1998, was the site burned or unburnedIn 1998, was the tube in a gap or shrub matrix
Storage Type:date  
float  
string  
string  
float  
string  
string  
string  
Measurement Type:dateTimerationominalnominalrationominalnominalnominal
Measurement Values Domain:
FormatYYYY-MM-DD
Precision
Unitdimensionless
Typenatural
Min
Max181 
Allowed Values and Definitions
Enumerated Domain 
Code Definition
Code1
Definitionrosemary
Source
Code Definition
Code2
Definitionscrubby flatwoods
Source
Code Definition
Code3
Definitionhickory
Source
Code Definition
Code4
Definitionfirelane
Source
Code Definition
Code5
Definitionsandhill
Source
Code Definition
Code6
Definitionsandpine scrub
Source
Allowed Values and Definitions
Enumerated Domain 
Code Definition
Code1
Definition90 cm
Source
Code Definition
Code2
Definition50 cm
Source
Code Definition
Code3
Definition10 cm
Source
Unitdimensionless
Typereal
Min
Max40 
Definitionnotes made during data collection
Allowed Values and Definitions
Enumerated Domain 
Code Definition
Code0
Definitionunburned
Source
Code Definition
Code1
Definitionburned
Source
Allowed Values and Definitions
Enumerated Domain 
Code Definition
Code0
Definitionnot gap
Source
Code Definition
Code1
Definitiongap
Source
Missing Value Code:        
CodeNA
Explno data
 
Code3
Explnot applicable
Code3
Explnot applicable
Accuracy Report:                
Accuracy Assessment:                
Coverage:                
Methods:                

Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/edi/251/6/8e4cc0e3bf1efc321dc90a0d6ca1ff7e
Name:ABS_SoilMoistTubesWithElevation.csv
Description:Soil-moisture-tube location and elevation data
Number of Records:108
Number of Columns:6

Table Structure
Object Name:ABS_SoilMoistTubesWithElevation.csv
Size:5784 byte
Authentication:a915cf76438143dc3ef64c699e416b18 Calculated By MD5
Text Format:
Number of Header Lines:1
Record Delimiter:\r\n
Orientation:column
Simple Delimited:
Field Delimiter:,
Quote Character:"

Table Column Descriptions
 
Column Name:tube_id  
northing  
easting  
initiated  
discont  
elevation  
Definition:ID of soil moisture tubenorthing coordinate of tube location, in UTM Zone 17 N (NAD 83)easting coordinate of tube location, in UTM Zone 17 N (NAD 83)date soil moisture data collection was initiated for each soil moisture tubedate soil moisture data collection was discontinued for each soil moisture tubeelevation of soil moisture tube location, (from Lidar flown in 2006)
Storage Type:float  
float  
float  
date  
date  
float  
Measurement Type:ratioratioratiodateTimedateTimeratio
Measurement Values Domain:
Unitdimensionless
Typenatural
Min
Max181 
Unitmeter
Typenatural
Min2999853 
Max3007816 
Unitmeter
Typenatural
Min463781 
Max466811 
FormatYYYY-MM-DD
Precision
FormatYYYY-MM-DD
Precision
Unitmeter
Typereal
Min42.15 
Max60.97 
Missing Value Code:            
Accuracy Report:            
Accuracy Assessment:            
Coverage:            
Methods:            

Non-Categorized Data Resource

Name:ABS_SoilMoistTubesWithElevationShape.zip
Entity Type:zip directory
Description:Soil-moisture-tube shape files
Physical Structure Description:
Object Name:ABS_SoilMoistTubesWithElevationShape.zip
Size:10637 bytes
Authentication:8db5b863cf43b79de1686152fbe1cf15 Calculated By MD5
Externally Defined Format:
Format Name:zip directory
Data:https://pasta-s.lternet.edu/package/data/eml/edi/251/6/d57624ba10343973347c5fe83fd27e27

Data Package Usage Rights

This data package is released to the “public domain” under Creative Commons CC0 1.0 “No Rights Reserved” (see: https://creativecommons.org/publicdomain/zero/1.0/). It is considered professional etiquette to provide attribution of the original work if this data package is shared in whole or by individual components. A generic citation is provided for this data package on the website https://portal.edirepository.org (herein “website”) in the summary metadata page. Communication (and collaboration) with the creators of this data package is recommended to prevent duplicate research or publication. This data package (and its components) is made available “as is” and with no warranty of accuracy or fitness for use. The creators of this data package and the website shall not be liable for any damages resulting from misinterpretation or misuse of the data package or its components. Periodic updates of this data package may be available from the website. Thank you.

Keywords

By Thesaurus:
(No thesaurus)Archbold Biological Station, Florida, Florida scrub, gaps, hydropattern, Lake Wales Ridge, monitoring data, vege
LTER Controlled Vocabularyfires, ground water, soil moisture, water table

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

Methods and protocols used in the collection of this data package
Description:

In 1998, we established soil moisture sampling points at Archbold Biological Station in rosemary scrub, scrubby flatwoods and oak-hickory scrub and along man-made sandy roadsides. In the three natural vegetation types, we sampled in recently burned (3-5 years prior to the initiation of the study) and long-unburned (>20 years) areas (sandy roadsides do not burn). At each sampling site, sampling points were paired with one sampling point within the shrub matrix and the other within a shrub-free gap. At each sampling point, tubes were installed using schedule 40 PVC tubes measuring 100 cm in length inserted perpendicular into the ground, with about 5 cm of tube protruding above the ground surface. We measured soil moisture at three depths (10, 50 and 90 cm) using a Troxler Electronics Lab Sentry 200-AP frequency domain reflectometry probe. The instrument was inserted into the tube to the appropriate sampling depths. To calibrate the probe, we compared instrument readings to gravimetric calculations of soil moisture using native soils in a large plastic garbage can with an inserted PVC tube. These data were used in a regression to develop the following relationship: percent soil moisture = D x 49.887 + 3039.543, where D is the resonance frequency shift measured by the Sentry 200-AP. This equation was programmed into the Sentry 200-AP, which then calculated percent soil moisture by volume with each reading. During the wettest periods, ground water intrusion into the tubes was recorded as evidence of soil saturation at depths below the point where water was encountered by the probe. Saturation was recorded as 40.0% soil moisture by volume.

We sampled tubes weekly from 1 October 1998 through 9 June 1999, bi-weekly from 23 June 1999 through 3 October 2001, monthly from 17 October 2001 through 15 June 2011, and every other month thereafter. On 27 January 2010, we reduced our sampling efforts collecting data from only 48 tubes. Monthly samples were taken in the middle of the month to allow for year-to-year comparisons. We completed our last round of sampling on 16 July 2018.

Although habitat types remained stable during the 19 years of the study, the time-since-fire and whether the point was in a shrub matrix or a gap changed. Tubes were replaced when dislodged by falling trees or partly melted in fires. Elevation data were acquired by lidar in 2006 and can be found (along with tube coordinates) in the elevation CSV file or zipped shapefile. Investigators analyzing this dataset are encouraged to test for spatial autocorrelation.

People and Organizations

Creators:
Individual: Carl W Weekley
Organization:Archbold Biological Station
Email Address:
na
Contacts:
Organization:Archbold Biological Station
Position:Data Manager
Email Address:
datamanager@archbold-station.org
Associated Parties:
Individual: Gabriel E Kamener
Organization:Archbold Biological Station
Email Address:
gkamener@gmail.com
Role:Data Archiver

Temporal, Geographic and Taxonomic Coverage

Temporal, Geographic and/or Taxonomic information that applies to all data in this dataset:

Time Period
Begin:
1998
End:
2018
Geographic Region:
Description:Archbold Biological Station, Highlands County, Florida, USA
Bounding Coordinates:
Northern:  27.21143Southern:  27.120002
Western:  -81.370065Eastern:  -81.332396

Project

Parent Project Information:

Title:No project title to report
Personnel:
Individual: Carl Weekley
Email Address:
na
Role:Principal Investigator
Funding: No funding to report
Related Project:
Title:No project title to report
Personnel:
Individual: Eric Menges
Email Address:
emenges@archbold-station.org
Role:Principal Investigator
Funding: No funding to report

Maintenance

Maintenance:
Description:completed
Frequency:

Additional Info

Additional Information:
 

Some months are missing from the dataset for various reasons. In some wet years, roads were too flooded to access sites. In later years, equipment failures resulted in missing months. Comments indicate when readings did not match what data recorders expected. Investigators analyzing this dataset are encouraged to test for spatial autocorrelation. Investigators are also encouraged to look for other published hydrology data from Archbold Biological Station through the EDI portal and cuahsi.org. All coordinates are in UTM Zone 17 N (NAD 83).

Publications: Weekley, C.W., D. Gagnon, E.S. Menges, P.F. Quintana-Ascencio, and S. Saha. 2007. Variation in soil moisture in relation to rainfall, vegetation, gaps, and time-since-fire in Florida scrub. Ecoscience 14(3): 377-386.

Other Metadata

EDI is a collaboration between the University of New Mexico and the University of Wisconsin – Madison, Center for Limnology:

UNM logo UW-M logo