Data Package Metadata View Summary

Seasonal incubation experiment investigating effects of nutrients leached from mud from debris flows on phytoplankton bloom dynamics in the Santa Barbara Channel

General Information

Data Package:
Local Identifier:	edi.292.1
Title:	Seasonal incubation experiment investigating effects of nutrients leached from mud from debris flows on phytoplankton bloom dynamics in the Santa Barbara Channel
Abstract:	This project examined the impact of mud-dumping into the Goleta Pier following the Santa Barbara debris flow in January of 2018. Specifically, our experiment focused on how the nutrients leached from mud from recent debris flow altered concentrations of organic and inorganic nutrients in the coastal seawater. We also examined how these altered levels of nutrients affected local phytoplankton communities. The outdoor incubation experiments were conducted in both fall and winter over the span of one week with seasonal phytoplankton communities collected from Goleta Pier. Samples were taken four times throughout the seven days to determine how nutrient concentrations and phytoplankton community compositions changed in response to the mud leachate addition. Future work includes both spring and summer experiments. This study will for the first time allow us to develop an understanding for the consequences that the mud dumping, which followed to Thomas Fire and subsequent debris flow, had on the effected coastal ecosystem.
Publication Date:	2019-06-06

Time Period

Begin:

2018-05-24

End:

2019-12-31

People and Organizations
Contact:	Iglesias-Rodriguez, Maria Debora (University of California, Santa Barbara) [ email ]
Contact:	Kim, Sylvia M (University of California, Santa Barbara) [ email ]
Creator:	Kim, Sylvia M (University of California, Santa Barbara)
Associate:	Pullman, Avery (University of California, Santa Barbara, Investigator)

Data Entities
Data Table Name:	Mud data
Description:	Mud data

Detailed Metadata

Data Entities

Data Table


Data:	https://pasta-s.lternet.edu/package/data/eml/edi/292/1/039cdcf51aa175e1511037c0608da391
Name:	Mud data
Description:	Mud data
Number of Records:	24
Number of Columns:	26

Table Structure

Object Name:

mud.csv

Size:

2833 bytes

Authentication:

a2a994c36fa4f9f7d580088240fc2f4f Calculated By MD5

Text Format:

Number of Header Lines:

Record Delimiter:

\r\n

Orientation:

column

Simple Delimited:

Field Delimiter:

Table Column Descriptions

Column Name:

experiment

samplingday

date

mean_NO2NO3

sd_NO2NO3

mean_PO4

sd_PO4

mean_NH4

sd_NH4

mean_Si

sd_Si

mean_DON

sd_DON

mean_DOP

sd_DOP

mean_DOC

sd_DOC

mean_POC

sd_POC

mean_PON

sd_PON

CN Ratio

mean_fvfm

sd_fvfm

mean_fixedarea

sd_fixedarea

Definition:

Unique Identifier

Sampling time point

Format is mm/dd/yyyy

Mean of concentration of the sum of nitrate and nitrite

Standard deviation of concentration of the sum of nitrate and nitrite

Mean of concentration of phosphate

Standard deviation of concentration of phosphate

Mean of concentration of ammonium

Standard of concentration of ammonium

Mean of concentration of silicate

Standard deviation of concentration of silicate

Mean of concentration of dissolved organic nitrogen

Standard deviation of concentration of dissolved organic nitrogen

Mean of concentration of dissolved organic phosphorus

Standard deviation of concentration of dissolved organic phosphorus

Mean of concentration of dissolved organic carbon

Standard deviation of concentration of dissolved organic carbon

Mean of concentration of particulate organic carbon from CHN analysis

Standard deviation of concentration of particulate organic carbon from CHN analysis

Mean of concentration of particulate organic nitrogen from CHN anlaysis

Standard deviation of concentration of particulate organic nitrogen from CHN anlaysis

Ratio of POC/PON

Mean of measurement of ratio of variable fluorescence/ maximum fluorescence by Aquapen

Standard deviation of measurements of ratio of variable fluorescence/ maximum fluorescence by Aquapen

Mean of measurements of the area under the induction curve of fluorescence during a saturating light flash by Aquapen

Standard deviation of measurements of the area under the induction curve of fluorescence during a saturating light flash by Aquapen

Storage Type:

string

date

float

Measurement Type:

nominal

dateTime

ratio

Measurement Values Domain:

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	FC
Definition	fallcontrol
Source

Code Definition

Code	FM
Definition	fallmud
Source

Code Definition

Code	WC
Definition	wintercontrol
Source

Code Definition

Code	WM
Definition	wintermud
Source

Code Definition

Code	SPC
Definition	springcontrol
Source

Code Definition

Code	SPM
Definition	springmud
Source

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	day0
Definition	samplingday0
Source

Code Definition

Code	day2
Definition	samplingday2
Source

Code Definition

Code	day4
Definition	samplingday4
Source

Code Definition

Code	day7
Definition	samplingday7
Source

Format	YYYY-MM-DD
Precision

Unit	micromolePerLiter
Type	real
Min	0.02
Max	1.96

Unit	micromolePerLiter
Type	real
Min	0
Max	0.07

Unit	micromolePerLiter
Type	real
Min	0.02
Max	0.41

Unit	micromolePerLiter
Type	real
Min	0
Max	0.04

Unit	micromolePerLiter
Type	real
Min	0.01
Max	4.86

Unit	micromolePerLiter
Type	real
Min	0
Max	0.5

Unit	micromolePerLiter
Type	real
Min	0.46
Max	4.64

Unit	micromolePerLiter
Type	real
Min	0
Max	0.27

Unit	micromolePerLiter
Type	real
Min	5.28
Max	8.04

Unit	micromolePerLiter
Type	real
Min	0.05
Max	0.92

Unit	micromolePerLiter
Type	real
Min	0.33
Max	0.5

Unit	micromolePerLiter
Type	real
Min	0.01
Max	0.1

Unit	micromolePerLiter
Type	real
Min	76.7
Max	114.38

Unit	micromolePerLiter
Type	real
Min	0.27
Max	2.73

Unit	microgramPerLiter
Type	real
Min	123
Max	837

Unit	microgramPerLiter
Type	real
Min	8.1
Max	137.8

Unit	microgramPerLiter
Type	real
Min	19.4
Max	69.6

Unit	microgramPerLiter
Type	real
Min	0.84
Max	7.94

Unit	dimensionless
Type	real
Min	5.4
Max	13.2

Unit	dimensionless
Type	real
Min	0.32
Max	0.58

Unit	dimensionless
Type	real
Min	0
Max	0.03

Unit	Relative chlorophyll fluorescence (RFU)
Type	natural
Min	517867
Max	2360083

Unit	Relative chlorophyll fluorescence (RFU)
Type	real
Min	12644.8
Max	234718.4

Missing Value Code:

Code	-99999
Expl	Missing Value

Code	-99999
Expl	Missing Value

Code	-99999
Expl	Missing Value

Code	-99999
Expl	Missing Value

Code	-99999
Expl	Missing Value

Code	-99999
Expl	Missing Value

Code	-99999
Expl	Missing Value

Code	-99999
Expl	Missing Value

Code	-99999
Expl	Missing Value

Code	-99999
Expl	Missing Value

Code	-99999
Expl	Missing Value

Code	-99999
Expl	Missing Value

Code	-99999
Expl	Missing Value

Code	-99999
Expl	Missing Value

Code	-99999
Expl	Missing Value

Code	-99999
Expl	Missing Value

Code	-99999
Expl	Missing Value

Code	-99999
Expl	Missing Value

Code	-99999
Expl	Missing Value

Code	-99999
Expl	Missing Value

Code	-99999
Expl	Missing Value

Code	-99999
Expl	Missing Value

Code	-99999
Expl	Missing Value

Code	-99999
Expl	Missing Value

Code	-99999
Expl	Missing Value

Code	-99999
Expl	Missing Value

Accuracy Report:

Accuracy Assessment:

Coverage:

Methods:

Data Package Usage Rights

This data package is released to the “public domain” under Creative Commons CC0 1.0 “No Rights Reserved” (see: https://creativecommons.org/publicdomain/zero/1.0/). It is considered professional etiquette to provide attribution of the original work if this data package is shared in whole or by individual components. A generic citation is provided for this data package on the website https://portal.edirepository.org (herein “website”) in the summary metadata page. Communication (and collaboration) with the creators of this data package is recommended to prevent duplicate research or publication. This data package (and its components) is made available “as is” and with no warranty of accuracy or fitness for use. The creators of this data package and the website shall not be liable for any damages resulting from misinterpretation or misuse of the data package or its components. Periodic updates of this data package may be available from the website. Thank you.

Keywords

By Thesaurus:
https://vocab.lternet.edu/vocab/vocab/index.php?_search_expresion=OCEANOGRAPHY	Oceanography
(No thesaurus)	Coastal ecosystem, Santa Barbara Channel, DIR, UCSB
https://vocab.lternet.edu/vocab/vocab/index.php?_search_expresion=MUD	Mud
https://vocab.lternet.edu/vocab/vocab/index.php?_search_expresion=debris+flow	Debris flow
https://vocab.lternet.edu/vocab/vocab/index.php?_search_expresion=phytoplankton	Phytoplankton
https://vocab.lternet.edu/vocab/vocab/index.php?_search_expresion=community+composition	Community composition
https://vocab.lternet.edu/vocab/vocab/index.php?tema=384&/nutrients	Nutrients

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

Methods and protocols used in the collection of this data package

Description:

Used triplicates of 8 liter vessels for experimental (filtered mud leachate added for 1:20 dilution) and control (filtered seawater added for 1:20 dilution). Vessels were stored in a constant local seawater flowing outdoor incubation tank over the course of 7 days. Sampling was conducted on days 0, 2, 4 and 7, and consisted of: Temperature (collected by HOBO Temperature logger (U12-015), dissolved organic carbon (DOC), dissolved inorganic nutrients (nitrite+nitrate (NO2+ NO3), phosphate (PO4), ammonium (NH4), silicate (SiO2)), total dissolved nitrogen (TDN) and phosphorus (TDP), particulate organic carbon (POC) and nitrogen (PON), Microscope samples, flow cytometry sample, aquapen sample, and 18S community data samples. Dissolved organic nitrogen (DON) and phosphorous (DOP) was calculated by subtracting dissolved inorganic nitrogen (NO2+ NO3 + NH4) from TDN and by subtracting dissolved inorganic phosphorous (PO4 ) from TDN, respectively. OJIP method was used for aquapen measurements in three replicates. Only fv/fm and fixedarea values were extracted from daily aquapen measurements.

People and Organizations

Creators:

Individual:

Sylvia M Kim

Organization:

University of California, Santa Barbara

Email Address:

sylvia_m_kim@ucsb.edu

Contacts:

Individual:

Maria Debora Iglesias-Rodriguez

Organization:

University of California, Santa Barbara

Email Address:

iglesias@ucsb.edu

Individual:

Sylvia M Kim

Organization:

University of California, Santa Barbara

Email Address:

sylvia_m_kim@ucsb.edu

Associated Parties:

Individual:

Avery Pullman

Organization:

University of California, Santa Barbara

Email Address:

apullman@ucsb.edu

Role:

Investigator

Temporal, Geographic and Taxonomic Coverage

Temporal, Geographic and/or Taxonomic information that applies to all data in this dataset:

Time Period

Begin:

2018-05-24

End:

2019-12-31

Sampling Site:

Description:

Outdoor Incubation experiment using Goleta Pier seawater

Site Coordinates:

Longitude (degree):

119.8322

Latitude (degree):

34.4168

Project

Parent Project Information:

Title:

Effect of nutrients leached from mud from recent mudflows on phytoplankton bloom dynamics in the Santa Barbara Channel

Personnel:

Individual:

Maria Debora Iglesias-Rodriguez

Organization:

University of California, Santa Barbara

Email Address:

iglesias@ucsb.edu

Role:

Principal Investigator

Funding:

Coastal Fund UC Santa Barbara: SPR 18-13

Maintenance

Maintenance:

Description:	ongoiong
Frequency:

Other Metadata

Additional Metadata

additionalMetadata
        |___text '\n    '
        |___element 'metadata'
        |     |___text '\n      '
        |     |___element 'unitList'
        |     |     |___text '\n        '
        |     |     |___element 'unit'
        |     |     |     |  \___attribute 'id' = 'micromolePerLiter'
        |     |     |     |  \___attribute 'multiplierToSI' = '0.001'
        |     |     |     |  \___attribute 'name' = 'micromolePerLiter'
        |     |     |     |  \___attribute 'parentSI' = 'molePerCubicMeter'
        |     |     |     |  \___attribute 'unitType' = 'amountOfSubstanceConcentration'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description'
        |     |     |     |     |___text 'micromole per liter'
        |     |     |     |___text '\n        '
        |     |     |___text '\n        '
        |     |     |___element 'unit'
        |     |     |     |  \___attribute 'id' = 'microgramPerLiter'
        |     |     |     |  \___attribute 'multiplierToSI' = '0.000000001'
        |     |     |     |  \___attribute 'name' = 'microgramPerLiter'
        |     |     |     |  \___attribute 'parentSI' = 'kilogramPerCubicMeter'
        |     |     |     |  \___attribute 'unitType' = 'massDensity'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description'
        |     |     |     |     |___text 'microgram per liter'
        |     |     |     |___text '\n        '
        |     |     |___text '\n        '
        |     |     |___element 'unit'
        |     |     |     |  \___attribute 'id' = 'Relative chlorophyll fluorescence (RFU)'
        |     |     |     |  \___attribute 'multiplierToSI' = ''
        |     |     |     |  \___attribute 'name' = 'Relative chlorophyll fluorescence (RFU)'
        |     |     |     |  \___attribute 'parentSI' = ''
        |     |     |     |  \___attribute 'unitType' = 'relative chlorophyll flourescence'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description'
        |     |     |     |     |___text ' unit of measurement of fluorescence detection.'
        |     |     |     |___text '\n        '
        |     |     |___text '\n        '
        |     |     |___element 'unit'
        |     |     |     |  \___attribute 'id' = 'dimensionless'
        |     |     |     |  \___attribute 'multiplierToSI' = ''
        |     |     |     |  \___attribute 'name' = 'dimensionless'
        |     |     |     |  \___attribute 'parentSI' = ''
        |     |     |     |  \___attribute 'unitType' = 'ratio'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description'
        |     |     |     |     |___text 'dimensionless'
        |     |     |     |___text '\n        '
        |     |     |___text '\n      '
        |     |___text '\n    '
        |___text '\n  '

Copyright 2024 Environmental Data Initiative. This material is based upon work supported by the National Science Foundation under grants #2223103 and #2223104. Any opinions, findings, conclusions, or recommendations expressed in the material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation. Please contact us with questions, comments, or for technical assistance regarding this web site or the Environmental Data Initiative. Please read our privacy policy to know what information we collect about you and to understand your privacy rights.

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Data Package Metadata View Summary

Seasonal incubation experiment investigating effects of nutrients leached from mud from debris flows on phytoplankton bloom dynamics in the Santa Barbara Channel

Data Entities

Data Table

Data Package Usage Rights

Keywords

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

People and Organizations

Temporal, Geographic and Taxonomic Coverage

Project

Parent Project Information:

Maintenance

Additional Metadata

Recently Added

Recently Updated

Data Package Metadata View Summary

Seasonal incubation experiment investigating effects of nutrients leached from mud from debris flows on phytoplankton bloom dynamics in the Santa Barbara Channel

+/- Data Entities

Data Table

+/- Data Package Usage Rights

+/- Keywords

+/- Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

+/- People and Organizations

+/- Temporal, Geographic and Taxonomic Coverage

+/- Project

Parent Project Information:

+/- Maintenance

+/- Additional Metadata

Data Entities

Data Package Usage Rights

Keywords

Methods and Protocols

People and Organizations

Temporal, Geographic and Taxonomic Coverage

Project

Maintenance

Additional Metadata