Data Package Metadata   View Summary

Chamber measurements of carbon dioxide (CO2) and methane (CH4) in Everglades following Hurricane Irma: 2017 - 2019

General Information
Data Package:
Local Identifier:edi.919.1
Title:Chamber measurements of carbon dioxide (CO2) and methane (CH4) in Everglades following Hurricane Irma: 2017 - 2019
Alternate Identifier:DOI PLACE HOLDER
Abstract:
On September 9, 2017, highwinds from Hurricane Irma impacted the Florida Everglades. With 24 hours of heavy rain along with strong winds and storm surge, the storm caused higher than normal water levels, wind-induced defoliation, uprooting of plants and soil disturbance in Everglades short-stature freshwater wetlands. The hurricane redistributed short-stature vegetation into dead mats in Everglades National Park. The high post-storm water levels saturated many of these dead mats, slowing decomposition and increasing their persistence on the landscape. In this study, we measure carbon dioxide (CO2) and methane (CH4) fluxes at dead mats and compared them to the ridge and slough of freshwater marsh and to the marl prairie.
Publication Date:2022-06-22
For more information:
Visit: DOI PLACE HOLDER

Time Period
Begin:
2017
End:
2019

People and Organizations
Contact:Malone, Sparkle L (Florida International University) [  email ]
Creator:Malone, Sparkle L (Florida International University)
Creator:Oberbauer, Steve F (Florida International University)

Data Entities
Data Table Name:
IRMA_Chamber_Data
Description:
Chamber measurements following hurricane Irma in Everglades National Park.
Data Table Name:
IRMA_Incubation_Experiment
Description:
Incubation experiment measurements following hurricane Irma in Everglades National Park.
Detailed Metadata

Data Entities


Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/edi/919/1/e7ae358c36e5f5f90f277980c0377aa1
Name:IRMA_Chamber_Data
Description:Chamber measurements following hurricane Irma in Everglades National Park.
Number of Records:126
Number of Columns:15

Table Structure
Object Name:EDI_Chamber.csv
Size:11987 byte
Authentication:f5002f9cadb9d99526dc7b93eef580e2 Calculated By MD5
Text Format:
Number of Header Lines:1
Record Delimiter:\r\n
Orientation:column
Simple Delimited:
Field Delimiter:,
Quote Character:"

Table Column Descriptions
 DateSloughPlotTrtNEEGEERecoMethane_LMethane_DGCBPART_AirT_WaterWater_LevelTSE
Column Name:Date  
Slough  
Plot  
Trt  
NEE  
GEE  
Reco  
Methane_L  
Methane_D  
GCB  
PAR  
T_Air  
T_Water  
Water_Level  
TSE  
Definition:The date of the chamber measurementThe slough (TS or SRS)Name of the plot measuredLandscape componentNet Ecosystem Exchange (CO2_L (carbon dioxide production under ambient light conditions))Gross Ecosystem Exchange or the difference between NEE and Reco (CO2_L - CO2_D)Ecosystem Respiration (CO2_D (carbon dioxide production under dark cloth))Methane flux under ambient light conditionsMethane flux under dark clothGreenhouse Carbon Balance or the quotient of Methane_L divided by NEE (Methane_L / NEE)Photosynthetically Active RadiationAir temperatureWater temperatureWater levelTime since event
Storage Type:dateTime  
string  
string  
string  
float  
float  
float  
float  
float  
float  
float  
float  
float  
float  
float  
Measurement Type:dateTimenominalnominalnominalratioratioratioratioratioratioratioratioratioratioratio
Measurement Values Domain:
FormatYYYY-MM-DD
Precision
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeSRS
DefinitionShark River Slough
Source
Code Definition
CodeTS
DefinitionTaylor Slough
Source
DefinitionName of the plot measured
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeMarl Prairie
DefinitionMarl Prairie
Source
Code Definition
CodeRidge
DefinitionRidge
Source
Code Definition
CodeSlough
DefinitionSlough
Source
Code Definition
CodeWrack
DefinitionWrack
Source
UnitmicromolePerMeterSquaredPerSecond
Typereal
UnitmicromolePerMeterSquaredPerSecond
Typereal
UnitmicromolePerMeterSquaredPerSecond
Typereal
UnitmicromolePerMeterSquaredPerSecond
Typereal
UnitmicromolePerMeterSquaredPerSecond
Typereal
Unitdimensionless
Typereal
UnitmicromolePerMeterSquaredPerSecond
Typereal
Unitcelsius
Typereal
Unitcelsius
Typereal
Unitmeter
Typereal
Unitdays
Typeinteger
Missing Value Code:
CodeNA
Explmissing value
CodeNA
Explmissing value
CodeNA
Explmissing value
CodeNA
Explmissing value
CodeNA
Explmissing value
CodeNA
Explmissing value
CodeNA
Explmissing value
CodeNA
Explmissing value
CodeNA
Explmissing value
CodeNA
Explmissing value
CodeNA
Explmissing value
CodeNA
Explmissing value
CodeNA
Explmissing value
CodeNA
Explmissing value
 
Accuracy Report:                              
Accuracy Assessment:                              
Coverage:                              
Methods:                              

Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/edi/919/1/28b022f5ebcc7189699497e5a11b03c9
Name:IRMA_Incubation_Experiment
Description:Incubation experiment measurements following hurricane Irma in Everglades National Park.
Number of Records:240
Number of Columns:8

Table Structure
Object Name:IRMA_EDI_Incubation.csv
Size:18123 byte
Authentication:fe6b549e56167aa31fda6fa869168bfe Calculated By MD5
Text Format:
Number of Header Lines:1
Record Delimiter:\r\n
Orientation:column
Simple Delimited:
Field Delimiter:,
Quote Character:"

Table Column Descriptions
 DateSubstrateTreatmentDry_MassFresh_MassF_MethaneF_carbonDioxideWater
Column Name:Date  
Substrate  
Treatment  
Dry_Mass  
Fresh_Mass  
F_Methane  
F_carbonDioxide  
Water  
Definition:The date of the chamber measurementIndicator to distinguish peat samples from intact peat, peat from wrack, and dislodged wrackIndicator for saturated and inundated samplesWeight of the sample after dryingWeight of the sample upon harvestingMethane flux rateCarbon dioxide flux rateThe difference between Dry_Mass and Fresh_Mass
Storage Type:string  
string  
string  
float  
float  
float  
float  
float  
Measurement Type:nominalnominalnominalratioratioratioratioratio
Measurement Values Domain:
Allowed Values and Definitions
Enumerated Domain 
Code Definition
Code2018-05-03
DefinitionA date in which a chamber measurement was taken.
Source
Code Definition
Code2018-05-18
DefinitionA date in which a chamber measurement was taken.
Source
Code Definition
Code2018-06-05
DefinitionA date in which a chamber measurement was taken.
Source
Code Definition
Code2018-06-27
DefinitionA date in which a chamber measurement was taken.
Source
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeDislodged Wrack
DefinitionDislodged Wrack
Source
Code Definition
CodePeat Control
DefinitionPeat Control
Source
Code Definition
CodePeat Wrack
DefinitionPeat Wrack
Source
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeInundated
DefinitionInundated
Source
Code Definition
CodeSaturated
DefinitionSaturated
Source
Unitgram
Typereal
Unitgram
Typereal
UnitmicromolePerMeterSquaredPerSecond
Typereal
UnitmicromolePerMeterSquaredPerSecond
Typereal
Unitgram
Typereal
Missing Value Code:
CodeNA
Explmissing value
CodeNA
Explmissing value
CodeNA
Explmissing value
CodeNA
Explmissing value
CodeNA
Explmissing value
CodeNA
Explmissing value
CodeNA
Explmissing value
CodeNA
Explmissing value
Accuracy Report:                
Accuracy Assessment:                
Coverage:                
Methods:                

Data Package Usage Rights

This information is released under the Creative Commons license - Attribution - CC BY (https://creativecommons.org/licenses/by/4.0/). The consumer of these data ("Data User" herein) is required to cite it appropriately in any publication that results from its use. The Data User should realize that these data may be actively used by others for ongoing research and that coordination may be necessary to prevent duplicate publication. The Data User is urged to contact the authors of these data if any questions about methodology or results occur. Where appropriate, the Data User is encouraged to consider collaboration or co-authorship with the authors. The Data User should realize that misinterpretation of data may occur if used out of context of the original study. While substantial efforts are made to ensure the accuracy of data and associated documentation, complete accuracy of data sets cannot be guaranteed. All data are made available "as is." The Data User should be aware, however, that data are updated periodically and it is the responsibility of the Data User to check for new versions of the data. The data authors and the repository where these data were obtained shall not be liable for damages resulting from any use or misinterpretation of the data. Thank you.

Keywords

By Thesaurus:
LTER Controlled Vocabularynet ecosystem exchange, ecosystem respiration
(No thesaurus)methane emissions, greenhouse carbon balance, gross ecosystem exchange

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

Methods and protocols used in the collection of this data package
Description:
Measurements were made in the Florida Everglades which are classified as subtropical, with a year-long growing season and distinct wet and dry seasons. Water enters the Everglades through local precipitation events (1380 mm y-1) and regional runoff. The majority of rainfall (70%) occurs during the wet season, which begins in May or early June with convective events and tropical depressions, e.g., thunderstorms and cyclones. Generally, surface water levels increase throughout the wet season and are highest in October, and decline to their lowest levels by the end of the dry season in May. Presently, the South Florida Water Management District uses a complex system of canals, levees, and pumping stations to control the system's hydrology. There are two major drainage systems in ENP, Shark River Slough (SRS) and Taylor Slough (TS). Shark River Slough is the largest freshwater flow system in ENP (991 km2). It serves as an important area for water storage and recharge to the Biscayne aquifer, provides critical habitat for a diverse assemblage of marsh dwelling fauna and flora, and acts as a major source of freshwater input into the estuarine areas of ENP. Wetland ecosystems in Shark River Slough are generally inundated throughout the year, including long-hydroperiod freshwater marshes that are characterized by peat soils (~1 m thick) overlying limestone bedrock with ridge and slough microtopography. Taylor Slough is the second largest flow-way (409 km2) for surface water. TS originates along the eastern boundary of ENP and extends approximately 30 km to Florida Bay. Freshwater ecosystems in Taylor Slough include short-hydroperiod marl prairies that are inundated for 4 to 6 months each year (June to November) and are characterized by shallow (~0.15 m) marl soils overlying limestone bedrock. Static chamber measurements of ecosystem carbon dioxide (CO2) and methane (CH4) fluxes were made at multiple locations throughout short-statured freshwater wetlands in Shark River Slough (n=83) and Taylor Slough (n=45) from 2017- 2019. In Shark River Slough, measurements were made at locations between the FCE-LTER research sites SRS-1 and SRS-2, on ridges and adjacent dead floating mats that were accessible by airboat (n=41). We included chamber measurement of ridge and slough from the FCE-LTER SRS-2 research site (n=42). In Taylor Slough, all measurement locations were at established sampling locations for FCE-LTER site TS/Ph-1 and representative of short-hydroperiod freshwater marl prairie communities (n=45). Dead floating mats were not present in Taylor Slough. All flux measurements (CO2 and CH4) were conducted using a closed-path chamber system which was composed of a Los Gatos Ultraportable Greenhouse Gas Analyzer (ABB, Los Gatos Research, San Jose, CA) that measured at 1 Hz and vented polycarbonate chambers (1.2×0.5×0.5 or 0.8×0.5×0.5 m, depending on the vegetation height). At Shark River Slough, the chambers were placed on a floating foam-backed plywood platform with an opening matching that of the chamber (0.5 x 0.5 m, Table S1). At TS/Ph-1, the chamber was positioned on aluminum-reinforced polyethylene bases (0.5 x 0.5 x 0.2 m) permanently mounted in the soil that provided a seal between the chamber and the soil when water level was at or below the upper edge of the base. The chamber was allowed to equilibrate to a steady rate of change (~1-2 min) followed by a 3 min measurement period under ambient light to determine NEE. After the ambient light measurements, a custom fit black cover was placed over the chamber for a dark measurement to determine ecosystem respiration (Reco). During the measurements, temperatures inside of the chamber and in the water were recorded with a shaded thermocouple temperature probe. Photosynthetically active radiation (PAR) was recorded using a LI-COR LI-190S-1 quantum sensor with a LI-250Q sensor reader. Water level was measured with a meter ruler at each sample location. At TS/Ph-1, chamber volumes for flux calculation were adjusted by water volume in the chamber when water levels were above the soil surface. Measurements were taken between 10:00 am and 3:00 pm at ambient light. To calculate flux rates of CO2 and CH4, we used the R package FluxCalR Gross ecosystem exchange (GEE) was calculated as: GEE = NEE - Reco Eq. 1 The net CH4 flux was measured at the same time as the CO2 measurements (both in light and dark). The gas fluxes are presented using atmospheric convention, where negative numbers denote uptake by the ecosystem and positive numbers indicate emissions from the ecosystem. We calculated the ratio of ambient light CH4 emissions to NEE (mol mol-1) or CH4:CO2. Values of CH4:CO2 greater than the greenhouse carbon compensation point for a 100-year time frame (-0.03) indicate that CH4 emissions were not offset by ecosystem productivity over a 100-year period, resulting in a warming effect to the climate. We examined changes in CH4:CO2 over the study period.

People and Organizations

Publishers:
Organization:Environmental Data Initiative
Email Address:
info@edirepository.org
Web Address:
https://edirepository.org
Id:https://ror.org/0330j0z60
Creators:
Individual: Sparkle L Malone
Organization:Florida International University
Email Address:
smalone@fiu.edu
Id:https://orcid.org/00000-0001-9034-1076
Individual: Steve F Oberbauer
Organization:Florida International University
Email Address:
oberbaue@fiu.edu
Contacts:
Individual: Sparkle L Malone
Organization:Florida International University
Email Address:
smalone@fiu.edu
Id:https://orcid.org/00000-0001-9034-1076

Temporal, Geographic and Taxonomic Coverage

Temporal, Geographic and/or Taxonomic information that applies to all data in this dataset:

Time Period
Begin:
2017
End:
2019
Geographic Region:
Description:Everglades National Park
Bounding Coordinates:
Northern:  25.88957Southern:  24.84956
Western:  -81.5185Eastern:  -80.38891

Project

Parent Project Information:

Title:Chamber measurements of carbon dioxide (CO2) and methane (CH4) in Everglades following Hurricane Irma: 2017 - 2019
Personnel:
Individual: Sparkle L Malone
Organization:Florida International University
Email Address:
smalone@fiu.edu
Id:https://orcid.org/0000-0001-9034-1076
Role:Co-Principal Investigator
Additional Award Information:
Funder:Sparkle L. Malone
Funder ID:The National Science Foundation
Number:1807533
Title:RAPID: Tipping the Greenhouse C Balance: Hurricane Irma's Role in Increasing the Global Warming Potential in Everglades Ecosystems

Maintenance

Maintenance:
Description:Completed
Frequency:
Other Metadata

Additional Metadata

additionalMetadata
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        |     |     |___text '\n        '
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        |     |     |     |  \___attribute 'name' = 'days'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description'
        |     |     |     |     |___text 'The number of days since hurricane Irma.'
        |     |     |     |___text '\n        '
        |     |     |___text '\n      '
        |     |___text '\n    '
        |___text '\n  '

Additional Metadata

additionalMetadata
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        |     |___element 'emlEditor'
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