Data Package Metadata View Summary

Interagency Ecological Program: Monitoring of water quality, phytoplankton, zooplankton, clams, and fish to support the Summer-Fall Suisun Marsh Salinity Control Gates Action 2018-2021

General Information

Data Package:

Local Identifier:

edi.980.1

Title:

Interagency Ecological Program: Monitoring of water quality, phytoplankton, zooplankton, clams, and fish to support the Summer-Fall Suisun Marsh Salinity Control Gates Action 2018-2021

Alternate Identifier:

DOI PLACE HOLDER

Abstract:

The Suisun Marsh Salinity Control Gates (SMSCG) have the potential to increase low-salinity-zone habitat for endangered Delta Smelt (Hypomesus transpacificus, California Endangered Species Act listed as Endangered, Federal Endangered Species Act listed as Threatened), and to allow them to more frequently occupy Suisun Marsh, especially Montezuma Slough, one of their most important rearing habitats. Operation of the SMSCG in summer and fall to improve Delta Smelt habitat are called for in the Biological Opinion and Incidental Take permit for the Central Valley Project and State Water Project. To support the adaptive management of the action, the California Department of Water Resources and collaborating agencies monitored water quality, phytoplankton, zooplankton, clams, and fishes during the SMSCG management action in 2018 and subsequent summer and fall months of non-action years (2019-2021). This data package includes data collected by the Interagency Ecological Program’s (IEP) long-term monitoring programs supplemented with targeted sample collection where existing surveys lacked spatial or temporal coverage. Monitoring during no-action years will be used as a baseline for comparison during action years. This data package will be updated annually during both action years and non-action years.

Publication Date:

2022-11-18

For more information:
Visit:	DOI PLACE HOLDER

Time Period

Begin:

2018-06-01

End:

2021-10-31

People and Organizations
Contact:	Hartman, Rosemary Kay (California department of water resources, Environmental Program Manager) [ email ]
Creator:	Hartman, Rosemary Kay (California Department of Water Resources, Environmental Program Manager)
Creator:	Rasmussen, Nick (California Department of Water Resources, Senior Environmental Scientist (Specialist))
Creator:	Wells, Elizabeth (California Department of Water Resources, Environmental Scientist)
Creator:	Stewart, Alan Jamel (California Department of Water Resources, Water Resources Engineer)
Creator:	Burdi, Christina E (California Department of Fish and Wildlife, Environmental Scientist)
Creator:	Breining-Aday , Spencer M (California Department of Fish and Wildlife)
Creator:	Sommer, Ted (California Department of Water Resources, Lead Scientist)

Data Entities
Data Table Name:	stations_SMSCG
Description:	Station locations used for water quality, phytoplankton, zooplankton, and clam sampling.
Data Table Name:	gatedailylog_1988-2021
Description:	Information on salinity control gate operations from 1988-2021
Data Table Name:	WQdata_smscg_2018-2021
Description:	Continuous water quality data from sondes in Suisun Marsh during 2018-2021
Data Table Name:	SMSCG_phytoplankton_formatted_2020-2021
Description:	Phytoplankton community composition data for 2020-2021
Data Table Name:	SMSCG_Zooplankton_CBNet_2018to2021
Description:	Mesozooplankton catch per unit effort
Data Table Name:	SMSCG_Zooplankton_Mysid_2018to2019
Description:	Catch per unit effort of macrozooplankton (mysids) during 2018 and 2019
Data Table Name:	FMWT_STN_ZoopTaxon_Lookup
Description:	Look up table for name codes used in the meso and macro zooplankton abundance data files
Data Table Name:	SMSCG_clam_EDI_2018_2021
Description:	Invasive bivalve abundance and distribution
Data Table Name:	EDSM_2018-2021_SummerFall_DSM
Description:	Catch of Delta Smelt during the summer and fall of 2018-2021 by the USFWS Enhanced Delta Smelt Monitoring Program.
Other Name:	ChangeLog
Description:	This file summarizes the high-level changes through subsequent versions of this data package.
Other Name:	SMSCG Related publications
Description:	Bibliography of peer-reviewed publications related to the summer SMSCG action of 2018
Other Name:	SMSCG_MonitoringPlan_2021
Description:	Study plan for the SMSCG summer-fall action, which was used to collect the data contained in this data package.

Detailed Metadata

Data Entities

Data Table


Data:	https://pasta-s.lternet.edu/package/data/eml/edi/980/1/877edca4c29ec491722e9d20a049a31c
Name:	stations_SMSCG
Description:	Station locations used for water quality, phytoplankton, zooplankton, and clam sampling.
Number of Records:	94
Number of Columns:	9

Table Structure

Object Name:

stations_SMSCG.csv

Size:

5071 byte

Authentication:

33e2fc1fedcf83144041fb946fb3dbb1 Calculated By MD5

Text Format:

Number of Header Lines:

Record Delimiter:

\r\n

Orientation:

column

Simple Delimited:

Field Delimiter:	,
Quote Character:	"

Table Column Descriptions

Project

StationCode

StationName

Longitude

Latitude

Zoops

Phyto

Clams

Column Name:

Project

StationCode

StationName

Longitude

Latitude

Zoops

Phyto

Clams

Definition:

Name of monitoring program that collects the samples

Shortened station name

Station Name

Longitude in decimal degrees, WGS 1984

Latitude decimal degrees of site sampled, WGS84

Was water quality data collected at this station?

Were zooplankton samples collected at this station?

Were phytoplankton samples collected at this station?

Were benthic clam samples collected at this station?

Storage Type:

string

float

string

Measurement Type:

nominal

ratio

nominal

Measurement Values Domain:

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	DWR
Definition	Department of Water Resources special studies
Source

Code Definition

Code	EMP
Definition	Environmental monitoring program
Source

Code Definition

Code	FMWT
Definition	Fall Midwater Trawl
Source

Code Definition

Code	FRP
Definition	Fish Restoration Program
Source

Code Definition

Code	STN
Definition	Summer Townet survey
Source

Definition

Shortened station name

Definition

Station Name

Unit	degree
Type	real

Unit	degree
Type	real

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	N
Definition	No
Source

Code Definition

Code	Y
Definition	Yes
Source

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	N
Definition	No
Source

Code Definition

Code	Y
Definition	Yes
Source

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	N
Definition	No
Source

Code Definition

Code	Y
Definition	Yes
Source

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	N
Definition	No
Source

Code Definition

Code	Y
Definition	Yes
Source

Missing Value Code:

Accuracy Report:

Accuracy Assessment:

Coverage:

Methods:

Data Table


Data:	https://pasta-s.lternet.edu/package/data/eml/edi/980/1/8585dd61b0a275f93492d36795cd8a53
Name:	gatedailylog_1988-2021
Description:	Information on salinity control gate operations from 1988-2021
Number of Records:	12117
Number of Columns:	7

Table Structure

Object Name:

SMSCG_GateDailyLog_1988-2021.csv

Size:

1256728 byte

Authentication:

a92a27d4997764836cfa8ca79dd3616e Calculated By MD5

Text Format:

Number of Header Lines:

Record Delimiter:

Orientation:

column

Simple Delimited:

Field Delimiter:	,
Quote Character:	"

Table Column Descriptions

Date

Flashboards

Gate1

Gate2

Gate3

Remark

Operating

Column Name:

Date

Flashboards

Gate1

Gate2

Gate3

Remark

Operating

Definition:

Date of operation

Whether flashboards are in (blocking the channel and allowing operation) or out.

Operational position of Gate 1

Operational position of Gate 2

Operational position of Gate 3

Notes on operation

Operational status of entire system

Storage Type:

dateTime

string

Measurement Type:

dateTime

nominal

Measurement Values Domain:

Format	YYYY-MM-DD
Precision

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	IN
Definition	Flashboards are in, allowing operation
Source

Code Definition

Code	IN-MOD
Definition	Modified flashboards are in
Source

Code Definition

Code	OUT
Definition	Flashboards are out.
Source

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	C
Definition	Gate is closed
Source

Code Definition

Code	M-OP
Definition	Manually operating
Source

Code Definition

Code	O
Definition	Gate is open
Source

Code Definition

Code	OP
Definition	Automatic tidal operation
Source

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	C
Definition	Gate is closed
Source

Code Definition

Code	M-OP
Definition	Manually operating
Source

Code Definition

Code	O
Definition	Gate is open
Source

Code Definition

Code	OP
Definition	Operating with the tides
Source

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	C
Definition	Gate is closed
Source

Code Definition

Code	M-OP
Definition	Manually operating
Source

Code Definition

Code	O
Definition	Gate is open
Source

Code Definition

Code	OP
Definition	Operating with the tides
Source

Definition

Notes on operation

Definition

Operational status of entire system

Missing Value Code:

Accuracy Report:

Accuracy Assessment:

Coverage:

Methods:

Data Table


Data:	https://pasta-s.lternet.edu/package/data/eml/edi/980/1/c73753ce273277cae690d14bba8270f0
Name:	WQdata_smscg_2018-2021
Description:	Continuous water quality data from sondes in Suisun Marsh during 2018-2021
Number of Records:	2082221
Number of Columns:	6

Table Structure

Object Name:

WQdata_smscg_2018-2021_FlaggedBadRemoved_clean.csv

Size:

108403291 byte

Authentication:

b65f48f934762cccd96f6a5dfb6daf62 Calculated By MD5

Text Format:

Number of Header Lines:

Record Delimiter:

Orientation:

column

Simple Delimited:

Field Delimiter:	,
Quote Character:	"

Table Column Descriptions

cdec_code

analyte_name

unit_name

time

value

qaqc_flag_id

Column Name:

cdec_code

analyte_name

unit_name

time

value

qaqc_flag_id

Definition:

Station Name (See Stations look up table)

Name of water quality parameter

unit of measurement

time at which data was recorded by sonde in Pacific Standard Time

Measured value of analyte

Flag assigning a quality category to each data point.

Storage Type:

string

dateTime

float

string

Measurement Type:

nominal

dateTime

ratio

nominal

Measurement Values Domain:

Definition

Station Name (See Stations look up table)

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	Chlorophyll
Definition	Chlorophyll fluorescence as measured with a YSI total algae sensor
Source

Code Definition

Code	Specific Conductance
Definition	specific conductance as measured with a YSI sonde
Source

Code Definition

Code	Turbidity
Definition	turbidity as measured with a YSI sonde
Source

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	FNU
Definition	Formazin Nephelometric Unit
Source

Code Definition

Code	NTU
Definition	Nephelometric Turbidity Unit
Source

Code Definition

Code	ug/L
Definition	micrograms per liter
Source

Code Definition

Code	uS/cm
Definition	microsiemens per centimeter
Source

Format	YYYY-MM-DDThh:mm:ssZ
Precision

Unit	see Unit_Name column
Type	real

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	G
Definition	Good data
Source

Code Definition

Code	U
Definition	Unchecked data
Source

Missing Value Code:

Code	NA
Expl	data not collected

Code	NA
Expl	not recorded

Accuracy Report:

Accuracy Assessment:

Coverage:

Methods:

Data Table


Data:	https://pasta-s.lternet.edu/package/data/eml/edi/980/1/4c909be218caba4e63469c1126d17368
Name:	SMSCG_phytoplankton_formatted_2020-2021
Description:	Phytoplankton community composition data for 2020-2021
Number of Records:	1155
Number of Columns:	15

Table Structure

Object Name:

SMSCG_phytoplankton_formatted_2020-2021.csv

Size:

151213 byte

Authentication:

f508f43b4e15dd95e1dd919f4a5f5ce8 Calculated By MD5

Text Format:

Number of Header Lines:

Record Delimiter:

Orientation:

column

Simple Delimited:

Field Delimiter:	,
Quote Character:	"

Table Column Descriptions

station

station_comb

region

collected_by

date

time_pst

kingdom

phylum

class

genus

taxon

phyto_form

organisms_per_ml

cells_per_ml

biovolume_per_ml

Column Name:

station

station_comb

region

collected_by

date

time_pst

kingdom

phylum

class

genus

taxon

phyto_form

organisms_per_ml

cells_per_ml

biovolume_per_ml

Definition:

Name of the survey and station where the sample was collected

Simplified station name, which groups stations from different surveys that are spatially close together (e.g., EMP_D22, STN_706, and FMWT_706 all become simply 706)

Geographical region of study area

Survey that collected the sample

Date of sample collection

Time of sample collection in Pacific Standard Time

Taxonmic kingdom

Taxonomic phylum given to the focal species

taxonomic class

Taxonomic genus name

latinized species name

phytoplankton cell grouping

number of organisms per milliliter of water sampled (i.e., a colony or filament containing multiple cells counts as one organism)

cells per milliliter of water sampled (i.e., counts all cells in a filament or colony)

estimated photosynthetic biovolume per milliliter of water sampled

Storage Type:

string

dateTime

string

float

Measurement Type:

nominal

dateTime

nominal

ratio

Measurement Values Domain:

Definition

Name of the survey and station where the sample was collected

Definition

Simplified station name, which groups stations from different surveys that are spatially close together (e.g., EMP_D22, STN_706, and FMWT_706 all become simply 706)

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	BY
Definition	Suisun Bay
Source

Code Definition

Code	FT
Definition	Floating stations (i.e., stations that target specific salinities rather than fixed location)
Source

Code Definition

Code	ME
Definition	Eastern Suisun Marsh
Source

Code Definition

Code	MW
Definition	Western Suisun Marsh
Source

Code Definition

Code	RV
Definition	Confluence of Sacramento and San Joaquin Rivers
Source

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	EMP
Definition	Environmental Monitoring Program
Source

Code Definition

Code	FMWT
Definition	Fall Midwater Trawl
Source

Code Definition

Code	STN
Definition	Summer Tow Net
Source

Format	YYYY-MM-DD
Precision

Definition

Time of sample collection in Pacific Standard Time

Definition

Taxonmic kingdom

Definition

Taxonomic phylum given to the focal species

Definition

taxonomic class

Definition

Taxonomic genus name

Definition

latinized species name

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	c
Definition	colony
Source

Code Definition

Code	f
Definition	filament
Source

Code Definition

Code	i
Definition	individual
Source

Unit	numberPerMilliliter
Type	real

Unit	numberPerMilliliter
Type	real

Unit	CubicMicronPerMilliliter
Type	real

Missing Value Code:

Code	NA
Expl	not recorded

Accuracy Report:

Accuracy Assessment:

Coverage:

Methods:

Data Table


Data:	https://pasta-s.lternet.edu/package/data/eml/edi/980/1/98795b108d5c1b34ebce4d8567a962d1
Name:	SMSCG_Zooplankton_CBNet_2018to2021
Description:	Mesozooplankton catch per unit effort
Number of Records:	581
Number of Columns:	77

Table Structure

Object Name:

SMSCG_Zooplankton_CBNet_2018to2021.csv

Size:

162257 byte

Authentication:

c5666c6e6472ed6b2e7699ae5bf6509c Calculated By MD5

Text Format:

Number of Header Lines:

Record Delimiter:

Orientation:

column

Simple Delimited:

Field Delimiter:	,
Quote Character:	"

Table Column Descriptions

Project

Year

Survey

Month

Date

Station

Time

TowDuration

Region

TideCode

DepthBottom

CondSurf

PPTSurf

CondBott

PPTBott

TempSurf

TempBottom

Secchi

Turbidity

Microcystis

TotalMeter

MeterEstimate

Volume

ACARTELA

ACARTIA

DIAPTOM

EURYTEM

OTHCALAD

PDIAPFOR

PDIAPMAR

SINOCAL

TORTANUS

ALLCALADULTS

ACANTHO

LIMNOSPP

LIMNOSINE

LIMNOTET

OITHDAV

OITHSIM

OITHSPP

OTHCYCAD

ALLCYCADULTS

HARPACT

EURYJUV

OTHCALJUV

PDIAPJUV

SINOCALJUV

ASINEJUV

ACARJUV

DIAPTJUV

TORTJUV

ALLCALJUV

LIMNOJUV

OITHJUV

OTHCYCJUV

ALLCYCJUV

EURYNAUP

OTHCOPNAUP

PDIAPNAUP

SINONAUP

ALLCOPNAUP

BOSMINA

DAPHNIA

DIAPHAN

OTHCLADO

ALLCLADOCERA

ASPLANCH

KERATELA

OTHROT

POLYARTH

SYNCH

TRICHO

ALLROTIFERS

BARNNAUP

CRABZOEA

OSTRACOD

CUMAC

Column Name:

Project

Year

Survey

Month

Date

Station

Time

TowDuration

Region

TideCode

DepthBottom

CondSurf

PPTSurf

CondBott

PPTBott

TempSurf

TempBottom

Secchi

Turbidity

Microcystis

TotalMeter

MeterEstimate

Volume

ACARTELA

ACARTIA

DIAPTOM

EURYTEM

OTHCALAD

PDIAPFOR

PDIAPMAR

SINOCAL

TORTANUS

ALLCALADULTS

ACANTHO

LIMNOSPP

LIMNOSINE

LIMNOTET

OITHDAV

OITHSIM

OITHSPP

OTHCYCAD

ALLCYCADULTS

HARPACT

EURYJUV

OTHCALJUV

PDIAPJUV

SINOCALJUV

ASINEJUV

ACARJUV

DIAPTJUV

TORTJUV

ALLCALJUV

LIMNOJUV

OITHJUV

OTHCYCJUV

ALLCYCJUV

EURYNAUP

OTHCOPNAUP

PDIAPNAUP

SINONAUP

ALLCOPNAUP

BOSMINA

DAPHNIA

DIAPHAN

OTHCLADO

ALLCLADOCERA

ASPLANCH

KERATELA

OTHROT

POLYARTH

SYNCH

TRICHO

ALLROTIFERS

BARNNAUP

CRABZOEA

OSTRACOD

CUMAC

Definition:

The project which the station is associated with

Year sampling occurred

Survey number where sample collected

Month of the year in which sample collected

Date of sample collection

Station Name

Time at start of tow at each station (24:00) in Pacific Daylight Time

Number of minutes reported for the tow

General geographic region of station (see station table)

Tide code: 1 = high slack, 2 = ebb, 3 = low slack, 4 = flood.

Water column depth

The Specific Conductivity of the first foot of water from the surface

Surface salinity based from EC at 25C

The Specific Conductivity at the bottom of the water column

Bottom salinity based from EC at 25C

Water temperature at the surface of the water column

Water temperature at the bottom of the water column

Secchi depth

Turbidity measured per a Hach Turbidity Device

Qualitative description of level of microcystis. 1 = absent, 2 = low, 3 = medium, 4 = high, 5 = very high.

Total flow meter counts during tow

Indicates whether total flowmeter counts for the tow were estimated due to errors with the flowmeter (e.g., obstruction, failure, missing data)

Volume of water that passed through the zooplankton net

Catch per unit effort of adults of the calanoid copepod Acartiella sinensis

Catch per unit effort of adults of the calanoid copepod Acartia sp.

Catch per unit effort of adults of the calanoid copepod family Diaptomidae

Catch per unit effort of adults of the calanoid copepod Eurytemora affinis

Catch per unit effort of other calanoid copepod adults

Catch per unit effort of adults of the calanoid copepod Pseudodiaptomus forbesi

Catch per unit effort of adults of the calanoid copepod Pseudodiaptomus marinus

Catch per unit effort of adults of the calanoid copepod Sinocalanus doerrii

Catch per unit effort of adults of the calanoid copepod Tortanus spp.

Catch per unit effort of the sum of all calanoid adults

Catch per unit effort of adults of the cyclopoid copepod Acanthocyclops spp.

Catch per unit effort of adults of the cyclopoid copepod Limnoithona spp.

Catch per unit effort of adults of the cyclopoid copepod Limnoithona sinensis

Catch per unit effort of adults of the cyclopoid copepod Limnoithona tetraspina

Catch per unit effort of adults of the cyclopoid copepod Oithona davisae

Catch per unit effort of adults of the cyclopoid copepod Oithona similis

Catch per unit effort of adults of the cyclopoid copepod Oithona spp.

Catch per unit effort of other cyclopoid copepod adults

Catch per unit effort of adults of the adult cyclopoid copepods

Catch per unit effort of all life stages of harpactacoids

Catch per unit effort of copepodids of the calanoid copepod Eurytemora affinis

Catch per unit effort of other calanoid copepod copepodids

Catch per unit effort of copepodids of the calanoid copepod Pseudodiaptomus spp.

Catch per unit effort of copepodids of the calanoid copepod Sinocalanus doerrii

Catch per unit effort of copepodids of the calanoid copepod Acartiella sinensis

Catch per unit effort of copepodids of the calanoid copepod Acartia spp.

Catch per unit effort of copepodids of calanoid copepods in the Diaptomidae family

Catch per unit effort of copepodids of the calanoid copepod Tortanus spp.

Catch per unit effort of the sum of all calanoid copepod copepodids

Catch per unit effort of copepodids of the cyclopoid copepod Limnoithona spp.

Catch per unit effort of copepodids of the cyclopoid copepod Oithona spp.

Catch per unit effort of copepodids of other cyclopoid copepodids

Catch per unit effort of the sum of all cyclopoid copepodids

Catch per unit effort of nauplii of the calanoid copepod Eurytemora affinis

Catch per unit effort of other copepod nauplii

Catch per unit effort of nauplii of the calanoid copepod Pseudodiaptomus spp.

Catch per unit effort of nauplii of the calanoid copepod Sinocalanus doerrii

Catch per unit effort of the sum of all copepod nauplii

Catch per unit effort of the cladoceran Bosmina longirostris

Catch per unit effort of the cladoceran Daphnia spp.

Catch per unit effort of the cladoceran Diaphanosoma spp.

Catch per unit effort of other cladocerans

Catch per unit effort of the sum of all cladocerans

Catch per unit effort of the rotifer Asplanchna spp.

Catch per unit effort of the rotifer Keratella spp.

Catch per unit effort of other rotifers

Catch per unit effort of the rotifer Polyarthra spp.

Catch per unit effort of the rotifer Synchaeta spp.

Catch per unit effort of the rotifer Trichocerca spp.

Catch per unit effort of the sum of all rotifers

Catch per unit effort of barnacle nauplii

Catcher per unit effort of crab zoea

Catch per unit effort of ostracods

Catch per unit effort of cumaceans

Storage Type:

string

float

string

dateTime

string

float

string

float

string

float

string

float

string

float

string

float

Measurement Type:

nominal

ratio

nominal

dateTime

nominal

ratio

nominal

ratio

nominal

ratio

nominal

ratio

Measurement Values Domain:

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	EMP
Definition	Environmental monitoring program
Source

Code Definition

Code	FMWT
Definition	Fall Midwater Trawl
Source

Code Definition

Code	FRP
Definition	Fish Restoration Program
Source

Code Definition

Code	STN
Definition	Summer Townet survey
Source

Definition

Year sampling occurred

Unit	dimensionless
Type	real

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	7
Definition	July
Source

Code Definition

Code	8
Definition	August
Source

Code Definition

Code	9
Definition	September
Source

Code Definition

Code	10
Definition	October
Source

Format	YYYY-MM-DD
Precision

Definition

Station Name

Definition

Time at start of tow at each station (24:00) in Pacific Daylight Time

Unit	minute
Type	real

Definition

General geographic region of station (see station table)

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	1
Definition	High slack
Source

Code Definition

Code	2
Definition	ebb
Source

Code Definition

Code	3
Definition	low slack
Source

Code Definition

Code	4
Definition	flood
Source

Unit	meter
Type	real

Unit	microSiemensperCentimeter
Type	real

Unit	permil
Type	real

Unit	microSiemensperCentimeter
Type	real

Unit	permil
Type	real

Unit	celsius
Type	real

Unit	celsius
Type	real

Unit	centimeter
Type	real

Unit	NephelometricTurbidityUnits
Type	real

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	1
Definition	Microcystsis not visible
Source

Code Definition

Code	2
Definition	Low level of microcystis present
Source

Code Definition

Code	3
Definition	Medium level of microcystis
Source

Code Definition

Code	4
Definition	High microcystis
Source

Unit	number
Type	integer

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	N
Definition	No
Source

Code Definition

Code	Y
Definition	Yes
Source

Unit	meterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Missing Value Code:

Code	NA
Expl	data not collected

Code	NA
Expl	data not collected

Code	NA
Expl	data not collected

Code	NA
Expl	data not collected

Code	NA
Expl	data not collected

Code	NA
Expl	data not collected

Code	NA
Expl	data not collected

Code	NA
Expl	data not collected

Code	NA
Expl	data not collected

Code	NA
Expl	data not collected

Code	NA
Expl	missing data

Accuracy Report:

Accuracy Assessment:

Coverage:

Methods:

Data Table


Data:	https://pasta-s.lternet.edu/package/data/eml/edi/980/1/bd763cbc95cd3bf4e82bc13af0ff8fbc
Name:	SMSCG_Zooplankton_Mysid_2018to2019
Description:	Catch per unit effort of macrozooplankton (mysids) during 2018 and 2019
Number of Records:	153
Number of Columns:	42

Table Structure

Object Name:

SMSCG_Zooplankton_Mysid_2018to2019.csv

Size:

25865 byte

Authentication:

e7c8f2032b27e9f06fd1584549b7f601 Calculated By MD5

Text Format:

Number of Header Lines:

Record Delimiter:

Orientation:

column

Simple Delimited:

Field Delimiter:	,
Quote Character:	"

Table Column Descriptions

Project

Year

Survey

Month

Date

Station

Time

TowDuration

Region

TideCode

DepthBottom

CondSurf

PPTSurf

CondBott

PPTBott

TempSurf

TempBottom

Secchi

Turbidity

Microcystis

TotalMeter

MeterEstimated

Volume

Acanthomysis_aspera

Hyperacanthomysis_longirostris

Acanthomysis_hwanhaiensis

Alienacanthomysis_macropsis

Deltamysis_holmquistae

Neomysis_kadiakensis

Neomysis_mercedis

Unidentified_Mysid

Americorophium_spinicorne

Americorophium_stimpsoni

Ampelisca_abdita

Corophium_alienense

Crangonyx_sp

Gammarus_daiberi

Grandidierella_japonica

Hyalella_sp

Unidentified_Amphipod

Unidentified_Corophium

Unidentified_Gammarus

Column Name:

Project

Year

Survey

Month

Date

Station

Time

TowDuration

Region

TideCode

DepthBottom

CondSurf

PPTSurf

CondBott

PPTBott

TempSurf

TempBottom

Secchi

Turbidity

Microcystis

TotalMeter

MeterEstimated

Volume

Acanthomysis_aspera

Hyperacanthomysis_longirostris

Acanthomysis_hwanhaiensis

Alienacanthomysis_macropsis

Deltamysis_holmquistae

Neomysis_kadiakensis

Neomysis_mercedis

Unidentified_Mysid

Americorophium_spinicorne

Americorophium_stimpsoni

Ampelisca_abdita

Corophium_alienense

Crangonyx_sp

Gammarus_daiberi

Grandidierella_japonica

Hyalella_sp

Unidentified_Amphipod

Unidentified_Corophium

Unidentified_Gammarus

Definition:

The project which the station is associated with

Year sample was collected

Survey number when sample collected

Month sample was collected

Date sample was collected

Station number where sample collected (see stations table)

Time at start of tow at each station in PDT (24:00)

Number of minutes reported for tow

General geographic region of station (see station table)

Tidal stage when sample collected

Depth of water

The Specific Conductivity of the first foot of water from the surface

Surface salinity based from EC at 25C

The Specific Conductivity at the bottom of the water column

Bottom salinity based from EC at 25C

Water temperature at the surface of the water column

Water temperature at the bottom of the water column

Secchi depth

Turbidity measured per a Hach Turbidity Device

Qualitative description of level of microcystis

Total flow meter counts during tow

Indicates whether total flowmeter counts for the tow were estimated due to errors with the flowmeter (e.g., obstruction, failure, missing data)

Volume of water that passed through the zooplankton net

Catch per unit effort of Acanthomysis aspera

Catch per unit effort of Hyperacanthomysis longirostris

Catch per unit effort of Acanthomysis hwanhaiensis

Catch per unit effort of Alienacanthomysis macropsis

Catch per unit effort of Deltamysis holmquistae

Catch per unit effort of Neomysis kadiakensis

Catch per unit effort of Neomysis mercedis

Catch per unit effort of Unidentified Mysid

Catch per unit effort of Americorophium spinicorne

Catch per unit effort of Americorophium stimpsoni

Catch per unit effort of Ampelisca abdita

Catch per unit effort of Corophium alienense

Catch per unit effort of Crangonyx sp

Catch per unit effort of Gammarus daiberi

Catch per unit effort of Grandidierella japonica

Catch per unit effort of Hyalella sp

Catch per unit effort of Unidentified Amphipod

Catch per unit effort of Unidentified Corophium

Catch per unit effort of Unidentified Gammarus

Storage Type:

string

float

string

dateTime

string

float

string

float

string

float

string

float

Measurement Type:

nominal

ratio

nominal

dateTime

nominal

ratio

nominal

ratio

nominal

ratio

nominal

ratio

Measurement Values Domain:

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	FMWT
Definition	Fall Midwater Trawl
Source

Code Definition

Code	STN
Definition	Summer Tow Net
Source

Definition

Year sample was collected

Unit	number
Type	real

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	7
Definition	July
Source

Code Definition

Code	8
Definition	August
Source

Code Definition

Code	9
Definition	September
Source

Code Definition

Code	10
Definition	October
Source

Format	YYYY-MM-DD
Precision

Definition

Station number where sample collected (see stations table)

Definition

Time at start of tow at each station in PDT (24:00)

Unit	minute
Type	real

Definition

General geographic region of station (see station table)

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	1
Definition	high slack
Source

Code Definition

Code	2
Definition	ebb
Source

Code Definition

Code	3
Definition	low slack
Source

Code Definition

Code	4
Definition	flood
Source

Unit	meter
Type	real

Unit	microSiemensPerCentimeter
Type	real

Unit	partsPerThousand
Type	real

Unit	microSiemensPerCentimeter
Type	real

Unit	partsPerThousand
Type	real

Unit	celsius
Type	real

Unit	celsius
Type	real

Unit	centimeter
Type	real

Unit	nephelometricTurbidityUnits
Type	real

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	1
Definition	absent
Source

Code Definition

Code	2
Definition	low
Source

Unit	meter
Type	integer

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	N
Definition	No
Source

Code Definition

Code	Y
Definition	Yes
Source

Unit	meterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Unit	numberPerMeterCubed
Type	real

Missing Value Code:

Code	NA
Expl	time not recorded

Code	NA
Expl	not recorded

Code	NA
Expl	not recorded

Code	NA
Expl	not recorded

Code	NA
Expl	not recorded

Code	NA
Expl	not recorded

Code	NA
Expl	not recorded

Code	NA
Expl	not recorded

Code	NA
Expl	not recorded

Code	NA
Expl	not recorded

Code	NA
Expl	not recorded

Code	NA
Expl	not recorded

Accuracy Report:

Accuracy Assessment:

Coverage:

Methods:

Data Table


Data:	https://pasta-s.lternet.edu/package/data/eml/edi/980/1/2247db24327c7c6d562d67a8fde0e937
Name:	FMWT_STN_ZoopTaxon_Lookup
Description:	Look up table for name codes used in the meso and macro zooplankton abundance data files
Number of Records:	73
Number of Columns:	11

Table Structure

Object Name:

FMWT_STN_ZoopTaxon_Lookup.csv

Size:

7603 byte

Authentication:

5d7af0b0a960536fae61bf20c07d8489 Calculated By MD5

Text Format:

Number of Header Lines:

Record Delimiter:

\r\n

Orientation:

column

Simple Delimited:

Field Delimiter:	,
Quote Character:	"

Table Column Descriptions

ZooCode

LifeStage

TaxonName

Phylum

Class

Order

Family

Genus

Species

Start Year

Notes

Column Name:

ZooCode

LifeStage

TaxonName

Phylum

Class

Order

Family

Genus

Species

Start Year

Notes

Definition:

names or name codes for zooplankton taxa

Life stage(s) of zooplankton includes in taxon

Latinized name of zooplankton taxon

Taxonomic phylum of taxon

Taxonomic class of taxon

Taxonomic order of taxon

Taxonomic family of taxon

Taxonomic genus of taxon

Specific epithet of taxon

when species started being recorded

Notes about when taxon was first recorded

Storage Type:

string

dateTime

string

Measurement Type:

nominal

dateTime

nominal

Measurement Values Domain:

Definition

names or name codes for zooplankton taxa

Definition

Life stage(s) of zooplankton includes in taxon

Definition

Latinized name of zooplankton taxon

Definition

Taxonomic phylum of taxon

Definition

Taxonomic class of taxon

Definition

Taxonomic order of taxon

Definition

Taxonomic family of taxon

Definition

Taxonomic genus of taxon

Definition

Specific epithet of taxon

Format	YYYY
Precision

Definition

Notes about when taxon was first recorded

Missing Value Code:

Code	NA
Expl	not applicable

Code	NA
Expl	not applicable

Code	NA
Expl	not applicable

Code	NA
Expl	not applicable

Accuracy Report:

Accuracy Assessment:

Coverage:

Methods:

Data Table


Data:	https://pasta-s.lternet.edu/package/data/eml/edi/980/1/c169596f76bde5357fb3ad94734383b0
Name:	SMSCG_clam_EDI_2018_2021
Description:	Invasive bivalve abundance and distribution
Number of Records:	258
Number of Columns:	42

Table Structure

Object Name:

SMSCG_clam_EDI_2018_2021_corr.csv

Size:

101089 byte

Authentication:

c0e3356ce1540bbf5cf1bd4bade663e0 Calculated By MD5

Text Format:

Number of Header Lines:

Record Delimiter:

\r\n

Orientation:

column

Simple Delimited:

Field Delimiter:	,
Quote Character:	"

Table Column Descriptions

Year

Month

Station

Station_alias

Date and time in Pacific Standard Time

North_decimal_degrees

West_decimal_degrees

Corbicula_AFDM_g_per_m2

Corbicula_density_per_m2

Corbicula_filtration_rate_m3_per_m2_per_day

Corbicula_grazing_rate_m3_per_m2_per_day

Potamocorbula_AFDM_g_per_m2

Potamocorbula_density_per_m2

Potamocorbula_filtration_rate_m3_per_m2_per_day

Potamocorbula_grazing_rate_m3_per_m2_per_day

Total_AFDM_g_per_m2

Total_density_per_m2

Total_filtration_rate_m3_per_m2_per_day

Total_grazing_rate_m3_per_m2_per_day

Corbicula_grazing_turnover_per_day

Potamocorbula_grazing_turnover_per_day

Total_grazing_turnover_per_day

Depth_ft

Depth_m

Percent_Organic_Matter

Percent_Clay

Percent_Silt

Percent_Mica

Percent_Fine_Sand

Percent_Coarse_Sand

Percent_Gravel

Percent_Fines

Water_temperature_C

Specific_conductivity_uS_per_cm

Chlorophyll_a_ug_per_L

Turbidity_NTU

Dissolved_oxygen_mg_per_L

Sediment

Habitat

Habitat_type

Done_all_years

Column Name:

Year

Month

Station

Station_alias

Date

North_decimal_degrees

West_decimal_degrees

Corbicula_AFDM_g_per_m2

Corbicula_density_per_m2

Corbicula_filtration_rate_m3_per_m2_per_day

Corbicula_grazing_rate_m3_per_m2_per_day

Potamocorbula_AFDM_g_per_m2

Potamocorbula_density_per_m2

Potamocorbula_filtration_rate_m3_per_m2_per_day

Potamocorbula_grazing_rate_m3_per_m2_per_day

Total_AFDM_g_per_m2

Total_density_per_m2

Total_filtration_rate_m3_per_m2_per_day

Total_grazing_rate_m3_per_m2_per_day

Corbicula_grazing_turnover_per_day

Potamocorbula_grazing_turnover_per_day

Total_grazing_turnover_per_day

Depth_ft

Depth_m

Percent_Organic_Matter

Percent_Clay

Percent_Silt

Percent_Mica

Percent_Fine_Sand

Percent_Coarse_Sand

Percent_Gravel

Percent_Fines

Water_temperature_C

Specific_conductivity_uS_per_cm

Chlorophyll_a_ug_per_L

Turbidity_NTU

Dissolved_oxygen_mg_per_L

Sediment

Habitat

Habitat_type

Done_all_years

Definition:

Year sampling occured

Month of sampling, either July or September

Station number

Station Name

Date of sample collection

Latitude decimal degrees of site sampled, WGS84

Degrees of west longitude, WGS 84

Ash-free dry biomass of Corbicula fluminea. A shell-length:ash free dry mass (AFDM) log-log regression was constructed for each species and each sampling event at a reference site (California Department of Water Resources

Number of individuals of Corbicula fluminea. Total individuals in a 0.052 m2 sample were converted to total per square meter.

Filtration rate of Corbicula fluminea in sample. Calculated as FR = AFDM * FRb, where: AFDM = Ash-free dry mass of Corbicula in sample, in g/m2; and FRb = species-specific and temperature-adjusted filtration rate per unit of biomass, in (m3 water)/(g AFDM)/day. Species specific filtration rates and calculations taken from Kimmerer and Thompson 2014 (Estuaries and Coasts).

Grazing rate of Corbicula fluminea in sample. Calculated following the method outlined in Kimmerer and Thompson 2014 (Estuaries and Coasts), which incorporates biomass, filtration rates, and an estimated refiltration proportion to account for boundary layers of water that are-re-grazed. Grazing rate (GR) = AFDM * FRb * 1-nmax, where: AFDM = ash-free dry mass in g/m2; FRb = temperature and species-specific grazing rate per unit of biomass, in m3 water/g AFDM/day; nmax = refiltration proportion = 3.0/((100/square root of density in individuals/m2) /mean clam siphon diameter, estimated from mean clam shell size, in mm)

Ash-free dry biomass of Potamocorbula amurensis. A shell-length:ash free dry mass (AFDM) log-log regression was constructed for each species and each sampling event at a reference site (California Department of Water Resources' Environmental Monitoring Program sites D7-C for Potamocorbula amurensis). Total ash-free dry mass for each 0.052m2 sample was estimated using the appropriate shell length:AFDM regression and converted to AFDM/m2

Number of individuals of Potamocorbula amurensis. Total individuals in a 0.052 m2 sample were converted to total per square meter.

Filtration rate of Potamocorbula amurensis in sample. Calculated as FR = AFDM * FRb, where: AFDM = Ash-free dry mass of Corbicula in sample, in g/m2; and FRb = species-specific and temperature-adjusted filtration rate per unit of biomass, in (m3 water)/(g AFDM)/day. Species specific filtration rates and calculations taken from Kimmerer and Thompson 2014 (Estuaries and Coasts).

Grazing rate of Potamocorbula amurensis in sample. Calculated following the method outlined in Kimmerer and Thompson 2014 (Estuaries and Coasts), which incorporates biomass, filtration rates, and an estimated refiltration proportion to account for boundary layers of water that are-re-grazed. Grazing rate (GR) = AFDM * FRb * 1-nmax, where: AFDM = ash-free dry mass in g/m2; FRb = temperature and species-specific grazing rate per unit of biomass, in m3 water/g AFDM/day; nmax = refiltration proportion = 3.0/((100/square root of density in individuals/m2) /mean clam siphon diameter, estimated from mean clam shell size, in mm)

Sum of Corbicula fluminea and Potamocorbula amurensis ash-free dry mass.

Sum of Corbicula fluminea and Potamocorbula amurensis individuals per meter squared

Sum of Corbicula fluminea and Potamocorbula amurensis individuals' water filtration rate in a sample.

Sum of Corbicula fluminea and Potamocorbula amurensis individuals' grazing rate in a sample.

Estimate of number of times Corbicula fluminea grazes the water column in a day. Calculated as turnover = grazing rate (m3/m2/day)/water depth (m)

Estimate of number of times Potamocorbula amurensis grazes the water column in a day. Calculated as turnover = grazing rate (m3/m3/day)/water depth (m)

Estimate of number of times a day water column is grazed by both clam species. Calculated as turnover = (Corbicula grazing +Potamocorbula grazing (m3/m2/day))/water depth (m)

Water column depth

Visually estimated percent of sediment volume that is organic matter

Visually estimated percent of sediment volume that is clay

Visually estimated percent of sediment volume that is silt

Visually estimated percent of sediment volume that is mica

Visually estimated percent of sediment volume that is silt

Visually estimated percent of sediment volume that is coarse matter (>0.5mm)

Visually estimated percent of sediment volume that is gravel

Visually estimated percent of sediment volume that is fine sediment; calculated as sum of Percent_Clay and Percent_Silt

Water temperature in Celsius at surface; measured using either YSI 6600 or YSI EXO sonde.

Specific conductivity of water, as proxy for salinity, in microSiemens per cm; measured using either YSI 6600 or YSI EXO sonde.

Chlorophyll a concentration in water, as proxy for phytoplankton biomass; as calculated from fluorescence either YSI 6600 or YSI EXO sonde.

Turbidity in water; measured using either YSI 6600 or YSI EXO sonde.

Dissolved oxygen in water; measured using either YSI 6600 or YSI EXO sonde.

Classification of sediment into a category, based on visual estimates of percent composition

Classification of site into a category, based on decreasing stream order

Differentiates between sites sampled in all years from those only sampled in 2018 as part of pilot project.

Storage Type:

string

dateTime

float

string

float

string

Measurement Type:

nominal

dateTime

ratio

nominal

Measurement Values Domain:

Definition

Year sampling occured

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	July
Definition	July
Source

Code Definition

Code	September
Definition	September
Source

Definition

Station number

Definition

Station Name

Format	YYYY-MM-DDThh:mm:ssZ
Precision

Unit	degree
Type	real

Unit	degree
Type	real

Unit	gramPerMeterSquared
Type	real

Unit	numberPerMeterSquared
Type	real

Unit	CubicMeterperSquareMeterperDay
Type	real

Unit	CubicMeterperSquareMeterperDay
Type	real

Unit	gramPerMeterSquared
Type	real

Unit	numberPerMeterSquared
Type	real

Unit	CubicMeterperSquareMeterperDay
Type	real

Unit	CubicMeterperSquareMeterperDay
Type	real

Unit	gramPerMeterSquared
Type	real

Unit	numberPerMeterSquared
Type	real

Unit	CubicMeterperSquareMeterperDay
Type	real

Unit	CubicMeterperSquareMeterperDay
Type	real

Unit	number
Type	real

Unit	number
Type	real

Unit	number
Type	real

Unit	foot
Type	real

Unit	meter
Type	real

Unit	percent
Type	integer

Unit	percent
Type	integer

Unit	percent
Type	integer

Unit	percent
Type	real

Unit	percent
Type	integer

Unit	percent
Type	real

Unit	percent
Type	integer

Unit	percent
Type	integer

Unit	celsius
Type	real

Unit	microSiemensPerCentimeter
Type	integer

Unit	dimensionless
Type	real

Unit	microgramPerLiter
Type	real

Unit	NephelometricTurbidityUnits
Type	real

Unit	milligramPerLiter
Type	real

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	Fines
Definition	Greater than 50 silt or clay
Source

Code Definition

Code	Gravel
Definition	Greater than 50% course particles
Source

Code Definition

Code	Organic
Definition	Greater than 50% vegetation or other organic material
Source

Code Definition

Code	Sand
Definition	Less than 50% organics
Source

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	River
Definition	Largest waterway
Source

Code Definition

Code	Channel
Definition	Larger waterway than slough
Source

Code Definition

Code	Slough
Definition	Smallest waterway
Source

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	Marsh
Definition	Sample location is in Suisun marsh
Source

Code Definition

Code	River
Definition	Sample location in the Sacramento River
Source

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	no
Definition	only sampled in 2018
Source

Code Definition

Code	yes
Definition	sampled in 2018, 2019, and 2020
Source

Missing Value Code:

Code	NA
Expl	data not collected

Accuracy Report:

Accuracy Assessment:

Coverage:

Methods:

Data Table


Data:	https://pasta-s.lternet.edu/package/data/eml/edi/980/1/2908b7b77d7ddc8727cdf3905d636d00
Name:	EDSM_2018-2021_SummerFall_DSM
Description:	Catch of Delta Smelt during the summer and fall of 2018-2021 by the USFWS Enhanced Delta Smelt Monitoring Program.
Number of Records:	406
Number of Columns:	8

Table Structure

Object Name:

EDSM_2018-2021_SummerFall_DSM.csv

Size:

15344 byte

Authentication:

5d0a1b27895872178bcec630ca7e3998 Calculated By MD5

Text Format:

Number of Header Lines:

Record Delimiter:

Orientation:

column

Simple Delimited:

Field Delimiter:	,
Quote Character:	"

Table Column Descriptions

Stratum

Week

Month

Year

tows

Stations

DSM

DSMcpue

Column Name:

Stratum

Week

Month

Year

Tows

Stations

DSM

DSMcpue

Definition:

Region of the estuary

week of the year that sampling occurred

Month of the year that sampling occurred

Year sampling occured

Total number of kodiak trawls collected in stratum for this week

Number of stations sampled in stratum per week. 2-6 tows per station.

Total number of Delta Smelt collected in stratum for that week

Catch per unit effort (number per trawl) of Delta Smelt in stratum for that week.

Storage Type:

string

float

string

float

Measurement Type:

nominal

ratio

nominal

ratio

Measurement Values Domain:

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	Cache Slough LI
Definition	Cache Slough and Liberty Island
Source

Code Definition

Code	Lower Sacramento
Definition	Lower Sacramento River
Source

Code Definition

Code	Lower San Joaquin
Definition	Lower San Joaquin River
Source

Code Definition

Code	Sac DW Ship Channel
Definition	Sacramento Deep Water Ship Channel
Source

Code Definition

Code	Suisun Bay
Definition	Suisun and Grizzly Bay
Source

Code Definition

Code	Suisun Marsh
Definition	Suisun Marsh
Source

Unit	dimensionless
Type	integer

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	7
Definition	July
Source

Code Definition

Code	8
Definition	August
Source

Code Definition

Code	9
Definition	September
Source

Code Definition

Code	10
Definition	October
Source

Definition

Year sampling occured

Unit	number
Type	integer

Unit	number
Type	integer

Unit	number
Type	integer

Unit	CatchperTrawl
Type	real

Missing Value Code:

Accuracy Report:

Accuracy Assessment:

Coverage:

Methods:

Non-Categorized Data Resource

Name:

ChangeLog

Entity Type:

docx

Description:

This file summarizes the high-level changes through subsequent versions of this data package.

Physical Structure Description:

Object Name:

ChangeLog.docx

Size:

21927 byte

Authentication:

e452abcd024f1bbd4a3044be816705cc Calculated By MD5

Externally Defined Format:

Format Name:

docx

Data:

https://pasta-s.lternet.edu/package/data/eml/edi/980/1/02f0b547c2779d25cff89672135f20e3

Non-Categorized Data Resource

Name:

SMSCG Related publications

Entity Type:

pdf

Description:

Bibliography of peer-reviewed publications related to the summer SMSCG action of 2018

Physical Structure Description:

Object Name:

SMSCG Related publications.pdf

Size:

102857 byte

Authentication:

f112826d4c0923879640811f02097039 Calculated By MD5

Externally Defined Format:

Format Name:

pdf

Data:

https://pasta-s.lternet.edu/package/data/eml/edi/980/1/b888c18ddd38e064007f95a684b4854c

Non-Categorized Data Resource

Name:

SMSCG_MonitoringPlan_2021

Entity Type:

pdf

Description:

Study plan for the SMSCG summer-fall action, which was used to collect the data contained in this data package.

Physical Structure Description:

Object Name:

SMSCG_MonitoringPlan_2021.pdf

Size:

3425043 byte

Authentication:

8ea269deb436b27b0b474433cb939116 Calculated By MD5

Externally Defined Format:

Format Name:

pdf

Data:

https://pasta-s.lternet.edu/package/data/eml/edi/980/1/d50a322c91d09598edc240e75f16c816

Data Package Usage Rights

This information is released under the Creative Commons license - Attribution - CC BY (https://creativecommons.org/licenses/by/4.0/). The consumer of these data ("Data User" herein) is required to cite it appropriately in any publication that results from its use. The Data User should realize that these data may be actively used by others for ongoing research and that coordination may be necessary to prevent duplicate publication. The Data User is urged to contact the authors of these data if any questions about methodology or results occur. Where appropriate, the Data User is encouraged to consider collaboration or co-authorship with the authors. The Data User should realize that misinterpretation of data may occur if used out of context of the original study. While substantial efforts are made to ensure the accuracy of data and associated documentation, complete accuracy of data sets cannot be guaranteed. All data are made available "as is." The Data User should be aware, however, that data are updated periodically and it is the responsibility of the Data User to check for new versions of the data. The data authors and the repository where these data were obtained shall not be liable for damages resulting from any use or misinterpretation of the data. Thank you.

Keywords

By Thesaurus:
LTER Controlled Vocabulary	estuaries, fishes, zooplankton, phytoplankton, water quality, algae, benthos
(No thesaurus)	Suisun Marsh, Interagency Ecological Program, IEP, clams

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

Methods and protocols used in the collection of this data package

Description:

Methods to derive ‘WQdata_smscg_2018-2021_FlaggedBadRemoved_clean.csv’ Water Quality data were collected by the Department of Water Resources (DWR) Suisun Marsh Branch and Environmental Monitoring Program via stationary water quality probes deployed at Collinsville, Montezuma Slough at Roaring River, National Steel, Hunter Cut, Tule Red Breach, Grizzly Bay, and Grizzly Bay Buoy. Continuous water quality measurements were taken using Yellow Springs International (YSI) EXO2 multi-parameter water quality probes. The probes were used to measure temperature, turbidity, specific conductivity, and chlorophyll fluorescence at 15-minute intervals from January 1, 2018 – December 31, 2021, in accordance with DWR’s QAQC protocols. These data are telemetered to DWR’s California Data Exchange Center (CDEC). To derive the dataset, we downloaded the data from CDEC (https://cdec.water.ca.gov/) and performed outlier detections.

Instrument(s):

YSI EXO2 or YSI 6600 sonde

Description:

Methods to derive SMSCG_phytoplankton_formatted_2020-2021.csv

NOTE: In February 2022, an error in the original biovolume calculation was discovered and a corrected version was uploaded. This error affected the first two versions of the data package (edi.876.1-edi.876.2).

Phytoplankton community composition was monitored every two weeks from mid-July to late October at 11 locations in the Lower Sacramento River, Suisun Bay, and Suisun Marsh. Samples were collected via boat from the top one meter of the water column of large channels. The 60-mL samples were fixed on site with Lugol’s solution and stored in amber glass bottles until analyzed. BSA Environmental Services, Inc. (https://www.bsaenv.com/) conducted identification and enumeration using the Utermöhl microscopic method (Utermöhl 1958) and modified Standard Methods (American Public Health Association 2012). In brief, an aliquot (10-20 mL) was placed into a counting chamber and allowed to settle for a minimum of 12 h. Within an aliquot, phytoplankton were enumerated in randomly chosen transects at a magnification of 800x using a Leica DMIL inverted microscope. A minimum of 400 total phytoplankton units were counted, and a minimum of 100 units of the dominant taxon were counted. For taxa that were in filaments or colonies, number of cells per filament or colony was recorded. Phytoplankton were identified to the lowest taxonomic level possible (usually genus). Photosynthetic biovolume was estimated for up to ten individuals per taxon per sample. All samples were analyzed in less than a year from time of collection. Counts were converted to organisms per mL and cells per mL and estimated photosynthetic biovolumes were used to estimate biovolume per mL.

American Public Health Association. 2012. Standard Methods for the Examination of Water and Wastewater. 22nd ed. American Public Health Association, Washington, D.C.

Utermöhl H. 1958. Zur Vervollkommnung der quantitativen Phytoplankton Methodik. Mitt Int Ver Theor Angew Limnol 9:1–38.

Description:

Methods to derive SMSCG_CBNet_2018to2021CPUE_7April2022.csv Mesozooplankton and Microcystis sampling relied on data from several long-term boat-based sampling programs, all of which are available as in integrated data set on EDI (Bashevkin, 2022) (Bashevkin et al. 2022). The Interagency Ecological Program’s Environmental Monitoring Program (EMP) (https://wildlife.ca.gov/Conservation/Delta/Zooplankton-Study), which collects zooplankton samples on a monthly basis at fixed sites throughout the upper SFE (Hennessy 2019); California Department of Fish and Wildlife’s Summer Townet Survey (STN) (https://www.wildlife.ca.gov/Conservation/Delta/Townet-Survey), which collects zooplankton and fish samples at fixed sites on a biweekly basis in July and August; and the Fall Midwater Trawl (FMWT) (https://www.wildlife.ca.gov/Conservation/Delta/Fall-Midwater-Trawl), which operates on a monthly basis in September-December and also collects zooplankton samples in addition to fish sampling at fixed sites in the study area. Additional sampling was conducted by STN and FMWT in September and October as part of this monitoring. Sampling methods were similar between surveys. For each mesozooplankton sample, an 85 cm long, 12.5 cm diameter zooplankton net made of 0.16 mm nylon mesh was attached to a steel sampling sled and towed through the water in a stepwise oblique manner for ten minutes to sample the entire water column. A General Oceanics model 2030 flowmeter was fixed in the mouth of the net to calculate water volume sampled. Samples were preserved in 10% formalin and subsamples were identified by taxonomists at CDFW’s laboratory in Stockton, CA. Catch per cubic meter of water sampled (CPUE) was calculated based on volume of water passing through the net as measured by the flowmeter. ==================== Data Sources ========================= Title: Interagency Ecological Program: Zooplankton abundance in the Upper San Francisco Estuary from 1972-2020, an integration of 5 long-term monitoring programs DOI: https://doi.org/10.6073/pasta/89dbadd9d9dbdfc804b160c81633db0d Creator: Bashevkin, S.M. Contact: Bashevkin, S.M. ===========================================================

Description:

Methods to derive SMSCG_MysidNet_CPUE_2018to2019_24Jan2022.csv Macrozooplankton (i.e., mysid) sampling relied on data from two long-term boat-based sampling programs. The California Department of Fish and Wildlife’s Summer Townet Survey (STN) (https://www.wildlife.ca.gov/Conservation/Delta/Townet-Survey), which collects zooplankton and fish samples at fixed sites on a biweekly basis in July and August and Fall Midwater Trawl (FMWT) (https://www.wildlife.ca.gov/Conservation/Delta/Fall-Midwater-Trawl), which operates on a monthly basis in September-December and also collects zooplankton samples in addition to fish sampling at fixed sites in the study area. Additional sampling was conducted by STN and FMWT as part of this monitoring. Sampling methods were similar between surveys. For each macrozooplankton sample, a net made of 0.505-mm nylon mesh (1.4 m long, 30 cm diameter) was attached to a steel sampling sled and towed through the water in a stepwise oblique manner for ten minutes to sample the entire water column. A General Oceanics model 2030 flowmeter was fixed in the mouth of the net to calculate water volume sampled. Samples were preserved in 10% formalin and subsamples were identified by taxonomists at CDFW’s laboratory in Stockton, CA. Catch per cubic meter of water sampled (CPUE) was calculated based on volume of water passing through the net as measured by the flowmeter.

Description:

Methods to derive SMSCG_clam_EDI_2018_2021.csv

NOTE1: In September 2022, an error was found in the calculations of mass, which resulted in slightly inaccurate values for ash free dry mass (AFDM), filtration rate, and grazing rate. Error affected the first three versions of the data package (edi.876.1-edi.876.3). Values have been corrected for all years.

NOTE2: In November 2022, an error was found in the calculation of grazing rates for both clam species caused by the inclusion of a unit conversion twice, resulting in units of kilo-cubic meters squared per day instead of cubic meters squared per day. Error only affected one version of the data package (edi.876.4). All values have been corrected.

Clam data were collected at 28 sites in and near Suisun Marsh between 2018 and 2021, visited in July and September each year. The sites we used extended from Grizzly Bay, up into Suisun and Montezuma Sloughs and the smaller sloughs that branch off of them, and eastward into Suisun Bay at Sherman Lake. Fourteen of the 28 sites were either part of the Interagency Ecological Program’s (IEP) long-term Ecological Monitoring Program (EMP), had been visited as part of an EMP benthic special study, or had previously hosted water quality sondes as part of other Department of Water Resources (DWR) monitoring efforts (see stations_SMSCG.csv). The remaining 14 sites were chosen to expand the sampling up into the smaller and shallower sloughs, and to fill in geographic gaps along the length of Suisun and Montezuma Sloughs.

Sites were sorted by decreasing stream order into three categories: River, Channel, and Slough. Environmental data was taken during the sampling runs at each of the sites, including water temperature (C), electrical conductivity as a proxy for salinity (uS/cm), turbidity (Nephelometric Turbidity Unit, or NTU), fluorescence as a proxy for chlorophyll-a (milligrams/liter), and dissolved oxygen (milligrams/liter) were measured using a YSI 6600 V2 or YSI EXO multi-parameter sonde. Water depth (meters) at each site visit was also recorded. Sediment composition at each site visit was described by visually estimating the percentage volume of silt/clay, sand, gravel, and organic material in each grab. Sediment was categorized as "Fines", "Sand", "Gravel", or "Organic", depending on majority composition. Any missing sediment category data points were filled post-hoc in with the predominant sediment type for that site from other visits.

All samples were collected using a Ponar dredge with a sample area of 0.052 m2, to a depth that varied from 4-10 cm with sediment type. Four Ponar grabs were taken at each of the two long-term monitoring sites and one grab sample was taken at the other 26 sites. Each sample was sieved on 595 µm mesh and preserved with 70% ethyl alcohol for subsequent identification, enumeration, and measuring to the nearest millimeter.

Density was calculated as the number of individual clams per square meter. A shell-length:ash free dry mass (AFDM) log-log regression was constructed for each species and each sampling event at a reference site (EMP monitoring sites D4-L for Corbicula fluminea and D7-C for Potamocorbula amurensis). Total ash-free dry mass for each sample was estimated using the appropriate shell length:AFDM regression and converted to AFDM/m2. Grazing rates (GR) for each sample were calculated following the method outlined in Kimmerer and Thompson 2014, which incorporates biomass, filtration rates, and an estimated refiltration proportion (see Equation 1) to account for boundary layers of water that are re-grazed. Grazing rate turnover (GRTO) is the grazing rate divided by the depth of the water at the sample site, and is in units of m3/day. For EMP monitoring sites, where more than one replicate sample was taken at each sampling event, replicate samples were averaged.

Equation 1:

GR = AFDM * FR * 1 - nmax

where:

GR = grazing rate, in (m3 water)/(m2 benthic surface)/day

AFDM = ash-free dry mass, in g/m2 benthic surface

FR = filtration rate, temperature-corrected and species-specific, in (m3 water)/(g AFDM)/day

nmax = refiltration proportion = 3.0/(s/do)

s = clam spacing factor, calculated as 100/√(density in individuals/m2)

do = mean clam siphon diameter, estimated from mean clam shell size, in mm

Description:

Methods to derive ‘EDSM_2018-2021_SummerFall_DSM.csv”:

Since 2016, the US Fish and Wildlife Service’s Enhanced Delta Smelt Monitoring Program (EDSM), has conducted Kodiak trawls to monitor Delta Smelt throughout the upper San Francisco Estuary (United States Fish and Wildlife Service et al. 2022). The Kodiak trawl had maximum mouth dimensions of 1.83 m x 7.62 m, with a body consisting of five panels of mesh starting with 5.1-cm stretch near the net mouth and decreasing to 0.3 cm stretch before the cod end, which was attached to a live box. Over the course of a week, field crews sample between 18 and 37 random sites, stratified by region of the estuary. During each weekly survey period a Kodiak trawl crew sampled 3-4 sites per day with a minimum of 2 tows per site. If no Delta Smelt were captured in the first two tows, up to four additional samples were taken. For each tow, the total number of Delta Smelt was counted, measured, and individuals were saved for future research. The results for each weekly sampling period and region were summarized based on catch per tow (CPUE) for each sampling region. Fish that could not be assigned to a particular tow (gilled in the net), and tows which were not completed (GearCondition Codes 4 and 9) were not included.

==================== Data Sources =========================

Title: Interagency Ecological Program and US Fish and Wildlife Service: San Francisco Estuary Enhanced Delta Smelt Monitoring Program data, 2016-2021

DOI: https://doi.org/10.6073/pasta/e1a540c161b7be56b941df50fd7b44c5

Creator: United States Fish and Wildlife Service

===========================================================

Description:

Formatting of data sets for publication on EDI was often completed using R scripts. The input data files and scripts are located in a GitHub repository: https://github.com/InteragencyEcologicalProgram/SMSCG/tree/master/EDI

People and Organizations

Publishers:

Organization:

Environmental Data Initiative

Email Address:

info@edirepository.org

Web Address:

https://edirepository.org

Id:

https://ror.org/0330j0z60

Creators:

Individual:

Dr. Rosemary Kay Hartman

Organization:

California Department of Water Resources

Position:

Environmental Program Manager

Email Address:

rosemary.hartman@water.ca.gov

Id:

https://orcid.org/0000-0002-0642-183X

Individual:

Dr. Nick Rasmussen

Organization:

California Department of Water Resources

Position:

Senior Environmental Scientist (Specialist)

Email Address:

Nicholas.Rasmussen@water.ca.gov

Id:

https://orcid.org/0000-0002-5106-9038

Individual:

Dr. Elizabeth Wells

Organization:

California Department of Water Resources

Position:

Environmental Scientist

Email Address:

Elizabeth.Wells@water.ca.gov

Id:

https://orcid.org/0000-0001-9822-2901

Individual:

Alan Jamel Stewart

Organization:

California Department of Water Resources

Position:

Water Resources Engineer

Email Address:

Alan.Stewart@water.ca.gov

Individual:

Christina E Burdi

Organization:

California Department of Fish and Wildlife

Position:

Environmental Scientist

Email Address:

Christina.Burdi@wildlife.ca.gov

Id:

https://orcid.org/0000-0002-1565-4475

Individual:

Spencer M Breining-Aday

Organization:

California Department of Fish and Wildlife

Email Address:

Spencer.breining-aday@wildlife.ca.gov

Id:

https://orcid.org/0000-0001-7212-8239

Individual:	Dr. Ted Sommer
Organization:	California Department of Water Resources
Position:	Lead Scientist

Contacts:

Individual:

Dr. Rosemary Kay Hartman

Organization:

California department of water resources

Position:

Environmental Program Manager

Address:

West Sacramento, CA United States

Email Address:

Rosemary.Hartman@water.ca.gov

Id:

https://orcid.org/0000-0002-0642-183X

Temporal, Geographic and Taxonomic Coverage

Temporal, Geographic and/or Taxonomic information that applies to all data in this dataset:

Time Period

Begin:

2018-06-01

End:

2021-10-31

Geographic Region:

Description:

Suisun Bay, Suisun Marsh, and the lower Sacramento River in California, USA

Bounding Coordinates:

Northern:	38.225	Southern:	38.033
Western:	-122.151	Eastern:	-121.684

Project

Parent Project Information:

Title:

Delta Smelt Summer-Fall Habitat Action

Personnel:

Individual:

Dr. Rosemary Kay Hartman

Organization:

California department of water resources

Position:

Environmental Program Manager

Email Address:

rosemary.hartman@water.ca.gov

Id:

https://orcid.org/0000-0002-0642-183X

Role:

Project Manager

Abstract:

The Delta Smelt Summer-Fall Habitat Action provides for operational and food enhancement actions. Potential operational actions that could be included are additional implementation of Suisun Marsh Salinity Control Gates (SMSCG) operations (this data set) and Delta outflow augmentation, while food enhancement actions could include the Sacramento Deep Water Ship Channel Food Web Study, North Delta Food Subsidies-Colusa Basin Drain Study and the Suisun Marsh and Roaring River Distribution System Food Subsidies Study.

Most Delta Smelt complete their entire life cycle within or immediately upstream of the estuary’s low salinity zone. Scientific research has generally shown that reducing salinity in Suisun Marsh and other areas within the Sacramento-San Joaquin Delta is beneficial for the Delta Smelt population due to increased distribution, foraging opportunities, and habitat complexity. The highest quality habitat in this large geographical region includes areas with complex bathymetry, in deep channels close to shoals and shallows, and in proximity to extensive tidal or freshwater marshlands and other wetlands. Therefore, the Record of Decision (ROD) signed by the Bureau of Reclamation (Reclamation) for the Reinitiation of Consultation (ROC) on the Coordinated Long-Term Operations (LTO) of the CVP and SWP included a Delta Smelt Summer-Fall Habitat Action intended to improve Delta Smelt access to food supply and habitat, thereby contributing to the recruitment, growth, and survival of Delta Smelt. The Delta Smelt Summer-Fall Habitat Action will investigate summer-fall habitat to better quantify and integrate information on how food, turbidity, salinity, velocity, and temperature interact with the species and contribute to the overall recruitment, growth, and survival of Delta Smelt. The ROD also provided a backstop commitment to maintain X2 no more eastward than 80 km in above normal and wet years during September and October. Overall, the Delta Smelt Summer-Fall Habitat Action is intended to increase the spatial overlap of Delta Smelt habitat attributes with a focus on Suisun Marsh and experimental enhancements of prey supply from the Cache Slough Complex.

Maintenance

Maintenance:

Description:	<para>This dataset will be updated annually after the summer-fall habitat action report is produced.</para>
Frequency:	annually

Other Metadata

Additional Metadata

additionalMetadata
        |___text '\n    '
        |___element 'metadata'
        |     |___text '\n      '
        |     |___element 'unitList'
        |     |     |___text '\n        '
        |     |     |___element 'unit'
        |     |     |     |  \___attribute 'id' = 'CubicMeterperSquareMeterperDay'
        |     |     |     |  \___attribute 'name' = 'CubicMeterperSquareMeterperDay'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description'
        |     |     |     |     |___text 'Volume of water filtered by clams in one square meter of sediment per day.'
        |     |     |     |___text '\n        '
        |     |     |___text '\n        '
        |     |     |___element 'unit'
        |     |     |     |  \___attribute 'id' = 'microSiemensperCentimeter'
        |     |     |     |  \___attribute 'name' = 'microSiemensperCentimeter'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description'
        |     |     |     |___text '\n        '
        |     |     |___text '\n        '
        |     |     |___element 'unit'
        |     |     |     |  \___attribute 'id' = 'NephelometricTurbidityUnits'
        |     |     |     |  \___attribute 'name' = 'NephelometricTurbidityUnits'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description'
        |     |     |     |___text '\n        '
        |     |     |___text '\n        '
        |     |     |___element 'unit'
        |     |     |     |  \___attribute 'id' = 'CatchperTrawl'
        |     |     |     |  \___attribute 'name' = 'CatchperTrawl'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description'
        |     |     |     |     |___text 'Number of smelt caught per trawl.'
        |     |     |     |___text '\n        '
        |     |     |___text '\n        '
        |     |     |___element 'unit'
        |     |     |     |  \___attribute 'id' = 'microSiemensPerCentimeter'
        |     |     |     |  \___attribute 'name' = 'microSiemensPerCentimeter'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description'
        |     |     |     |___text '\n        '
        |     |     |___text '\n        '
        |     |     |___element 'unit'
        |     |     |     |  \___attribute 'id' = 'partsPerThousand'
        |     |     |     |  \___attribute 'name' = 'partsPerThousand'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description'
        |     |     |     |___text '\n        '
        |     |     |___text '\n        '
        |     |     |___element 'unit'
        |     |     |     |  \___attribute 'id' = 'nephelometricTurbidityUnits '
        |     |     |     |  \___attribute 'name' = 'nephelometricTurbidityUnits '
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description'
        |     |     |     |___text '\n        '
        |     |     |___text '\n        '
        |     |     |___element 'unit'
        |     |     |     |  \___attribute 'id' = 'numberPerMeterCubed'
        |     |     |     |  \___attribute 'name' = 'numberPerMeterCubed'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description'
        |     |     |     |___text '\n        '
        |     |     |___text '\n        '
        |     |     |___element 'unit'
        |     |     |     |  \___attribute 'id' = 'CubicMicronPerMilliliter'
        |     |     |     |  \___attribute 'name' = 'CubicMicronPerMilliliter'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description'
        |     |     |     |___text '\n        '
        |     |     |___text '\n        '
        |     |     |___element 'unit'
        |     |     |     |  \___attribute 'id' = 'see Unit_Name column'
        |     |     |     |  \___attribute 'name' = 'see Unit_Name column'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description'
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        |     |___text '\n    '
        |___text '\n  '

Additional Metadata

additionalMetadata
        |___text '\n    '
        |___element 'metadata'
        |     |___text '\n      '
        |     |___element 'emlEditor'
        |     |        \___attribute 'app' = 'ezEML'
        |     |        \___attribute 'release' = '2022.11.16'
        |     |___text '\n    '
        |___text '\n  '

Copyright 2024 Environmental Data Initiative. This material is based upon work supported by the National Science Foundation under grants #2223103 and #2223104. Any opinions, findings, conclusions, or recommendations expressed in the material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation. Please contact us with questions, comments, or for technical assistance regarding this web site or the Environmental Data Initiative. Please read our privacy policy to know what information we collect about you and to understand your privacy rights.

EDI is a collaboration between the University of New Mexico and the University of Wisconsin – Madison, Center for Limnology:

Data Package Metadata View Summary

Interagency Ecological Program: Monitoring of water quality, phytoplankton, zooplankton, clams, and fish to support the Summer-Fall Suisun Marsh Salinity Control Gates Action 2018-2021

Data Entities

Data Table

Data Table

Data Table

Data Table

Data Table

Data Table

Data Table

Data Table

Data Table

Non-Categorized Data Resource

Non-Categorized Data Resource

Non-Categorized Data Resource

Data Package Usage Rights

Keywords

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

People and Organizations

Temporal, Geographic and Taxonomic Coverage

Project

Parent Project Information:

Maintenance

Additional Metadata

Additional Metadata

Recently Added

Recently Updated

Data Package Metadata View Summary

Interagency Ecological Program: Monitoring of water quality, phytoplankton, zooplankton, clams, and fish to support the Summer-Fall Suisun Marsh Salinity Control Gates Action 2018-2021

+/- Data Entities

Data Table

Data Table

Data Table

Data Table

Data Table

Data Table

Data Table

Data Table

Data Table

Non-Categorized Data Resource

Non-Categorized Data Resource

Non-Categorized Data Resource

+/- Data Package Usage Rights

+/- Keywords

+/- Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

+/- People and Organizations

+/- Temporal, Geographic and Taxonomic Coverage

+/- Project

Parent Project Information:

+/- Maintenance

+/- Additional Metadata

+/- Additional Metadata

Data Entities

Data Package Usage Rights

Keywords

Methods and Protocols

People and Organizations

Temporal, Geographic and Taxonomic Coverage

Project

Maintenance

Additional Metadata

Additional Metadata