Data Package Metadata   View Summary

Preparation of dissolved organic carbon (DOC) leachates from permafrost soils collected from the North Slope of Alaska in the summers of 2018 and 2022

General Information
Data Package:
Local Identifier:knb-lter-arc.20154.5
Title:Preparation of dissolved organic carbon (DOC) leachates from permafrost soils collected from the North Slope of Alaska in the summers of 2018 and 2022
Alternate Identifier:DOI PLACE HOLDER
Abstract:

Dissolved organic carbon (DOC) was leached from permafrost soils collected from the frozen permafrost layer at four sites underlying tussock tundra or wet sedge tundra vegetation and from both undisturbed soil and a thermokarst failure on the North Slope of Alaska during the summers of 2018 and 2022.

Publication Date:2023-12-05
For more information:
Visit: DOI PLACE HOLDER

Time Period
Begin:
2022-02-13
End:
2022-12-16

People and Organizations
Contact:Cory, Rose (University of Michigan) [  email ]
Contact:Rieb, Emma (University of Michigan) [  email ]
Contact:Polik, Catherine (University of Minnesota) [  email ]
Contact:Ward, Collin (Woods Hole Oceanographic Institution) [  email ]
Contact:Kling, George (University of Michigan) [  email ]
Contact:Information Manger (ARCTIC LTER) [  email ]
Creator:Cory, Rose (University of Michigan)
Creator:Rieb, Emma (University of Michigan)
Creator:Polik, Catherine (University of Minnesota)
Creator:Ward, Collin (Woods Hole Oceanographic Institution)
Creator:Kling, George (University of Michigan)

Data Entities
Data Table Name:
Permafrost_leachate_preparation_csv
Description:
Preparation of dissolved organic carbon (DOC) leachates from permafrost soils collected from the North Slope of Alaska in the summers of 2018 and 2022
Other Name:
Permafrost_leachate_preparation_xlsx
Description:
Excel file with metadata and data sheets: Preparation of dissolved organic carbon (DOC) leachates from permafrost soils collected from the North Slope of Alaska in the summers of 2018 and 2022
Detailed Metadata

Data Entities


Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/knb-lter-arc/20154/5/8d46233270299ca9ad361b009c48f203
Name:Permafrost_leachate_preparation_csv
Description:Preparation of dissolved organic carbon (DOC) leachates from permafrost soils collected from the North Slope of Alaska in the summers of 2018 and 2022
Number of Records:5
Number of Columns:19

Table Structure
Object Name:Permafrost_leachate_preparation.csv
Size:906 bytes
Authentication:757803084d592f991b23a7a29e3c32be Calculated By MD5
Text Format:
Number of Header Lines:1
Record Delimiter:\n
Orientation:column
Simple Delimited:
Field Delimiter:,
Quote Character:"

Table Column Descriptions
 
Column Name:Sortchem  
Site  
Latitude  
Longitude  
Depth_m  
Date_soil  
Date_leachate  
Frozen_soil_weight  
MilliQ_volume  
Thaw_time  
DOC_leaching_rate  
Temp_C  
Cond_uS  
pH  
DOC_uM  
a305  
SUVA_254  
Slope_ratio  
Fluorescence_index  
Definition:A unique number assigned to each sample collected at a specific site at a specific date and time. The year that the sample was collected is followed by a dash and then a sequential number. For example, if 600 samples were collected in 2002, then the first sample collected is 2002-0001 and the last sample is 2002-0600.Site Name. If a soil site, the site is described in the name by general location then specific feature (e.g., watertrack) then specific sampling point (1,2,3,...). If multiple subsamples of an initial soil sample taken from the same specific sampling point are used, they are designated as by letter (A, B, C,...). Lake and stream sites use common names (e.g., Toolik) or LTER number codes. Exceptions in naming procedure are provided in the Code Information and in the AK-LTER_Site_Info.xls file.Latitude of the sampling site in decimal degreesLongitude of the sampling site in decimal degreesDepth from surface of lake, stream, or soil, or a description of location such as meta for metalimnionSoil sampling dateDate of soil leachate preparationWeight of frozen soil in gramsVolume of MilliQ water mixed with frozen soil in litersTime soils were leached in MilliQ water prior to filtrationRate of DOC leached from soil into water in micromolePerGramPerDaySample water temperature, deg CElectrical conductivity of the water samplepH (opposite of the log of the molar hydrogen ion concentration)Dissolved organic carbon in micromolePerLiterAbsorption coefficient of chomophoric dissolved organic matter at 305 nanometers in PerMeterSpecific ultraviolet absorbance at 254 nanometers in Liter PermgCPerMeterSpectral slope ratioFluorescence Index
Storage Type:string  
string  
float  
float  
string  
date  
date  
float  
float  
float  
float  
float  
float  
float  
float  
float  
float  
float  
float  
Measurement Type:nominalnominalratiorationominaldateTimedateTimeratioratioratioratioratioratioratioratioratioratioratioratio
Measurement Values Domain:
DefinitionA unique number assigned to each sample collected at a specific site at a specific date and time. The year that the sample was collected is followed by a dash and then a sequential number. For example, if 600 samples were collected in 2002, then the first sample collected is 2002-0001 and the last sample is 2002-0600.
DefinitionSite Name. If a soil site, the site is described in the name by general location then specific feature (e.g., watertrack) then specific sampling point (1,2,3,...). If multiple subsamples of an initial soil sample taken from the same specific sampling point are used, they are designated as by letter (A, B, C,...). Lake and stream sites use common names (e.g., Toolik) or LTER number codes. Exceptions in naming procedure are provided in the Code Information and in the AK-LTER_Site_Info.xls file.
Unitdegree
Typereal
Min68.527 
Max68.621161 
Unitdegree
Typereal
Min-149.615047 
Max-149.313306 
DefinitionDepth from surface of lake, stream, or soil, or a description of location such as meta for metalimnion
FormatYYYY-MM-DD
Precision
FormatYYYY-MM-DD
Precision
Unitgram
Typenatural
Min782 
Max6378 
Unitliter
Typereal
Min3.26 
Max11.5 
Unithour
Typenatural
Min29 
Max97 
UnitmicromolePerGramPerDay
Typereal
Min0.6 
Max5.3 
Unitcelsius
Typenatural
Min20 
Max20 
UnitmicrosiemenPerCentimeter
Typenatural
Min
Max24 
Unitnumber
Typereal
Min5.5 
Max6.8 
UnitmicromolePerLiter
Typenatural
Min609 
Max1726 
UnitnumberPerMeter
Typereal
Min18.5 
Max31.2 
UnitliterPerMilligramPerMeterSquared
Typereal
Min1.02 
Max3.42 
Unitnumber
Typereal
Min0.69 
Max1.19 
Unitnumber
Typereal
Min1.55 
Max1.69 
Missing Value Code:
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Accuracy Report:                                      
Accuracy Assessment:                                      
Coverage:                                      
Methods:                                      

Non-Categorized Data Resource

Name:Permafrost_leachate_preparation_xlsx
Entity Type:unknown
Description:Excel file with metadata and data sheets: Preparation of dissolved organic carbon (DOC) leachates from permafrost soils collected from the North Slope of Alaska in the summers of 2018 and 2022
Physical Structure Description:
Object Name:Permafrost_leachate_preparation.xlsx
Size:127658 bytes
Authentication:9646a35f806592dd45b132d10ff83eeb Calculated By MD5
Externally Defined Format:
Format Name:application/vnd.openxmlformats-officedocument.spreadsheetml.sheet
Data:https://pasta-s.lternet.edu/package/data/eml/knb-lter-arc/20154/5/32acc38105fe3b50a2f70cfc54ffeb98

Data Package Usage Rights

This information is released under the Creative Commons license - Attribution - CC BY (https://creativecommons.org/licenses/by/4.0/). The consumer of these data ("Data User" herein) is required to cite it appropriately in any publication that results from its use. The Data User should realize that these data may be actively used by others for ongoing research and that coordination may be necessary to prevent duplicate publication. The Data User is urged to contact the authors of these data if any questions about methodology or results occur. Where appropriate, the Data User is encouraged to consider collaboration or co-authorship with the authors. The Data User should realize that misinterpretation of data may occur if used out of context of the original study. While substantial efforts are made to ensure the accuracy of data and associated documentation, complete accuracy of data sets cannot be guaranteed. All data are made available "as is." The Data User should be aware, however, that data are updated periodically and it is the responsibility of the Data User to check for new versions of the data. The data authors and the repository where these data were obtained shall not be liable for damages resulting from any use or misinterpretation of the data. Thank you.

Keywords

By Thesaurus:
https://vocab.lternet.edu/carbon, dissolved organic carbon, permafrost, organic matter, pH, conductivity, soil
Arctic LTERarctic, organic nutrients

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

Methods and protocols used in the collection of this data package
Description:
Permafrost soil cores were collected on the North Slope of Alaska during the ice-free summer months of June-August 2018 near the Toolik Field Station. Soil cores were collected from within the permafrost layer (at 85 cm below the surface) of Imnavait Creek wet sedge tundra and Toolik Lake tussock tundra soils. In June 2022, soil was sampled from a thermokarst failure on the shore of Lake LTER 395 on the North Slope of Alaska, where an abrupt collapse of thawing soil exposed deeper permafrost soil. Soil was sampled from the permafrost layer exposed in the headwall of the thermokarst failure (> 80 cm below the surface) using MilliQ-rinsed pickaxes. The permafrost and thermokarst soil samples were collected as previously described in detail (Bowen et al., 2020). All soils were stored in freezers at the Toolik Field Station until overnight shipment to Woods Hole Oceanographic Institution (WHOI). All samples were frozen upon arrival at WHOI and immediately placed into freezers until leachate preparation. DOC was leached from the permafrost and thermokarst soils as previously described (Bowen et al., 2020). Briefly, frozen soil and MilliQ water were mixed in 5-gallon, MilliQ-rinsed HDPE buckets and allowed to leach in the dark for up to 48 hours at 4 °C. Both the soil-to-water ratio of soil leachates and the leaching time were adjusted to achieve a final concentration of ~1500 μM DOC in the leachates, as estimated from the absorbance of chromophoric dissolved organic matter at 305 nm (a<sub>305</sub>). All leachates were passed through MilliQ-rinsed 60 μm mesh screens to remove the largest particulates, then through MilliQ-rinsed 5 μm high-capacity Whatman cartridge filters, and finally through 0.2 μm high-capacity Whatman cartridge filters. Soil leachates were stored at 4 °C until further use. Supporting soil leachate chemistry analyses (pH, specific conductivity, DOC, and chromophoric and fluorescent dissolved organic matter) were performed as previously described (Cory et al., 2013, 2014; Kling et al., 2000). Two separate soil leachates were prepared from the thermokarst soil on different dates (20-Oct-2022 and 9-Nov-2022), using the same soil and leaching conditions. Two separate soil leachates (tussock tundra A and tussock tundra B) were prepared from the tussock tundra soil on different dates (19-Feb-2022 and 18-Oct-2022), using the same soil and leaching conditions. Water chemistry analyses (pH, specific conductivity, DOC, and chromophoric and fluorescent dissolved organic matter) were performed on each of the permafrost leachates, as previously described (Kling et al., 2000; Cory et al., 2013). DOC concentrations were measured using a Shimadzu TOC-V analyzer (CV < 5% on duplicate analyses; Kling et al., 2000). Chromophoric and fluorescent dissolved organic matter (CDOM and FDOM, respectively) were measured for each permafrost leachate (Cory et al., 2014), and then the spectral slope ratio (S<sub>R</sub>), specific UV absorbance at 254 nm (SUVA<sub>254</sub>), and fluorescence index were calculated as previously described (Cory et al., 2014). References: Bowen, J. C., Ward, C. P., Kling, G. W., & Cory, R. M. (2020). Arctic amplification of global warming strengthened by sunlight oxidation of permafrost carbon to CO2. Geophysical Research Letters, 47(12), 0–3. https://doi.org/10.1029/2020GL087085 Cory, R. M., Crump, B. C., Dobkowski, J. A., & Kling, G. W. (2013). Surface exposure to sunlight stimulates CO2 release from permafrost soil carbon in the Arctic. Proceedings of the National Academy of Sciences USA, 110(9), 3429–3434. https://doi.org/10.1073/pnas.1214104110 Cory, R. M., Ward, C. P., Crump, B. C., & Kling, G. W. (2014). Sunlight controls water column processing of carbon in arctic fresh waters. Science, 345(6199), 925–928. https://doi.org/10.1126/science.1253119 Rieb, E. C., Polik, C. A., Ward, C. P., Kling, G. W., & Cory, R. M. Controls on the respiration of ancient permafrost carbon in sunlit arctic surface waters. In review. Kling, G. W., Kipphut, G. W., Miller, M. M., & O’Brien, W. J. (2000). Integration of lakes and streams in a landscape perspective: The importance of material processing on spatial patterns and temporal coherence. Freshwater Biology, 43(4), 477–497. https://doi.org/10.1046/j.1365-2427.2000.00515.x

People and Organizations

Publishers:
Organization:Environmental Data Initiative
Email Address:
info@edirepository.org
Web Address:
https://edirepository.org
Id:https://ror.org/0330j0z60
Creators:
Individual: Rose Cory
Organization:University of Michigan
Email Address:
rmcory@umich.edu
Id:https://orcid.org/0000-0001-9867-7084
Individual: Emma Rieb
Organization:University of Michigan
Email Address:
erieb@umich.edu
Id:https://orcid.org/0000-0002-0276-8238
Individual: Catherine Polik
Organization:University of Minnesota
Email Address:
polik020@umn.edu
Id:https://orcid.org/0000-0003-0440-1162
Individual: Collin Ward
Organization:Woods Hole Oceanographic Institution
Email Address:
cward@whoi.edu
Id:https://orcid.org/0000-0003-2979-0280
Individual: George Kling
Organization:University of Michigan
Email Address:
gwk@umich.edu
Id:https://orcid.org/0000-0002-6349-8227
Contacts:
Individual: Rose Cory
Organization:University of Michigan
Email Address:
rmcory@umich.edu
Id:https://orcid.org/0000-0001-9867-7084
Individual: Emma Rieb
Organization:University of Michigan
Email Address:
erieb@umich.edu
Id:https://orcid.org/0000-0002-0276-8238
Individual: Catherine Polik
Organization:University of Minnesota
Email Address:
polik020@umn.edu
Id:https://orcid.org/0000-0003-0440-1162
Individual: Collin Ward
Organization:Woods Hole Oceanographic Institution
Email Address:
cward@whoi.edu
Id:https://orcid.org/0000-0003-2979-0280
Individual: George Kling
Organization:University of Michigan
Email Address:
gwk@umich.edu
Id:https://orcid.org/0000-0002-6349-8227
Organization:ARCTIC LTER
Position:Information Manger
Email Address:
arc_im@mbl.edu

Temporal, Geographic and Taxonomic Coverage

Temporal, Geographic and/or Taxonomic information that applies to all data in this dataset:

Time Period
Begin:
2022-02-13
End:
2022-12-16
Sampling Site: 
Description:Toolik tussock tundra soil pit 2018 Soil pits south of Toolik Lake, North Slope of Alaska. Handheld Garmin GPS
Site Coordinates:
Longitude (degree): -149.615047Latitude (degree): 68.621161000000001
Sampling Site: 
Description:Imnavait wet sedge tundra soil pit 2018 Soil pits in Imnavait Creek basin, North Slope of Alaska. Handheld Garmin GPS
Site Coordinates:
Longitude (degree): -149.313306Latitude (degree): 68.608861000000005
Sampling Site: 
Description:LTER 395 thermokarst failure headwall soil 2022 Headwall of thermokarst failure on the shore of Lake LTER 395, North Slope of Alaska. Handheld Garmin GPS
Site Coordinates:
Longitude (degree): -149.548811Latitude (degree): 68.527000000000001

Project

Parent Project Information:

Title:Collaborative proposal: Coupled biological and photochemical degradation of dissolved organic carbon in the Arctic
Personnel:
Individual: Byron Crump
Role:Principal Investigator
Funding: National Science Foundation 1754835
Related Project:
Title:Doctoral Dissertation Research: Sunlight stimulates a spectrum of microbial CO2 production from permafrost carbon
Personnel:
Individual: Rose Cory
Role:Principal Investigator
Funding: National Science Foundation 2228992
Related Project:
Title:LTER: The Role of Climate Variability in Controlling Arctic Ecosystem Function
Personnel:
Individual: Kevin Griffin
Role:Principal Investigator
Funding: National Science Foundation 2224743
Related Project:
Title:LTER: The Role of Biogeochemical and Community Openness in Governing Ecological Change in Arctic Ecosystems
Personnel:
Individual: Edward Rastetter
Role:Principal Investigator
Funding: National Science Foundation 1637459
Related Project:
Title:Collaborative Research: Tracking Carbon, Water, and Energy Balance of the Arctic Landscape at Flagship Observatories in Alaska and Siberia
Personnel:
Individual: George Kling
Role:Principal Investigator
Funding: National Science Foundation 1936769
Related Project:
Title:Development of a High-throughput, Temperature-controlled LED-based Instrument to Characterize the Wavelength Dependence of Photochemical Reactions in Aquatic Ecosystems
Personnel:
Individual: Collin Ward
Role:Principal Investigator
Funding: National Science Foundation 2219660
Related Project:
Title:LTER: The Role of Biogeochemical and Community Openness in Governing Ecological Change in Arctic Ecosystems
Personnel:
Individual: Edward Rastetter
Role:Principal Investigator
Funding: NSF 1637459
Related Project:
Title:Arctic LTER: Climate Change and Changing Disturbance Regimes in Arctic Landscapes
Personnel:
Individual: Gaius Shaver
Role:Principal Investigator
Funding: NSF 1026843
Related Project:
Title:LTER: The Arctic LTER Project: The Future Characteristics of Arctic Communities, Ecosystems, and Landscapes
Personnel:
Individual: John Hobbie
Role:Principal Investigator
Funding: NSF 9810222
Related Project:
Title:The Arctic LTER Project: Terrestrial and Freshwater Researchon Ecological Controls
Personnel:
Individual: John Hobbie
Role:Principal Investigator
Funding: NSF 9211775
Related Project:
Title:An LTER Program for the Alaskan Arctic
Personnel:
Individual: Gaius Shaver
Role:Principal Investigator
Funding: NSF 8702328

Maintenance

Maintenance:
Description:
Frequency:
Other Metadata

Additional Metadata

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