Data Package Metadata   View Summary

The structural and nutrient chemistry of decomposing cacti in the Sonoran Desert

General Information
Data Package:
Local Identifier:knb-lter-cap.678.1
Title:The structural and nutrient chemistry of decomposing cacti in the Sonoran Desert
Alternate Identifier:DOI PLACE HOLDER
Abstract:
Cacti are an abundant taxa in the Sonoran Desert, but most research focuses on their population dynamics and physiology and relatively little is currently known regarding their role in desert biogeochemical cycles, particularly regarding their decomposition dynamics. A better understanding of cactus decomposition and their role in ecosystem processes is important, considering there are many threatened and endangered species within this group. In this study, we decomposed two common species of cacti, Opuntia chlorotica (pancake prickly pear) and Cylindropuntia acanthocarpa (buckhorn cholla), in the Sonoran Desert of Arizona, U.S.A. Mass loss, water loss, nutrient content, and structural and metabolic chemistry were measured at regular intervals over the course of one year of decomposition. Our results demonstrate the contribution of cactus decomposition to carbon and nutrient recycling, with dynamics that are overall comparable to those of woody and herbaceous leaf litter for most elements. We enumerate, however, a particularly important role in calcium dynamics in comparison to woody and herbaceous leaf litter. Despite different structural characteristics, both cactus species released nutrients at a statistically equivalent rate, though with altered timing of net immobilization and mineralization due to temporary mass gain and associated nutrient immobilization in cholla. The release of nutrients and water from decaying cacti have a modest influence on underlying soil CO2 flux, secondary to a more dominant influence of overall soil temperature and moisture. Thus, our data provide a baseline for understanding the decay dynamics of two common cactus species and suggest that, while there is still a lack of information pertaining to cactus decomposition, the similarities between leaf litter and cacti will aid our predictions of the consequences of future changes in cactus populations.
Publication Date:2021-11-01
Language:english
For more information:
Visit: https://sustainability.asu.edu/caplter/data/data-catalog/view/knb-lter-cap.678.1/xml/
Visit: DOI PLACE HOLDER

Time Period
Begin:
2017-02-01
End:
2019-12-01

People and Organizations
Contact:Information Manager (Central Arizona–Phoenix LTER) [  email ]
Creator:Ball, Becky (Arizona State University, West campus)
Creator:Vega, Miranda (Arizona State University)
Creator:Torres, Alexander (Arizona State University)

Data Entities
Data Table Name:
678_AmbrosiaPhotodegradation.csv
Description:
Mass loss and chemistry of Ambrosia deltoidea litter from the CAP LTER Desert Fertilization experiment sites decomposed with and without UV radiation for 40 weeks
Detailed Metadata

Data Entities


Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/knb-lter-cap/678/1/385b1bd49c17c5eaacfffd72061db64b
Name:678_AmbrosiaPhotodegradation.csv
Description:Mass loss and chemistry of Ambrosia deltoidea litter from the CAP LTER Desert Fertilization experiment sites decomposed with and without UV radiation for 40 weeks
Number of Records:85
Number of Columns:26

Table Structure
Object Name:678_AmbrosiaPhotodegradation.csv
Size:16181 bytes
Authentication:9918c7e09443b59864a858ee5872d0d1 Calculated By MD5
Text Format:
Number of Header Lines:1
Record Delimiter:\r\n
Orientation:column
Simple Delimited:
Field Delimiter:,
Quote Character:"

Table Column Descriptions
 
Column Name:Species  
Rep  
IDNo  
Days  
PropFresh  
PropAfdm  
Ca  
K  
Mg  
Mn  
Na  
Phosph  
Water  
Hemicellulose  
Cellulose  
LigninSAD  
Carbon  
Nitrogen  
Aromatic  
Lignin  
LipidPy  
Polysac  
NBearing  
Protein  
Phenol  
Unknown  
Definition:Species of cactusReplicate block in which it was decomposedNumber uniquely identifies each individual cactus segment per speciesNumber of days cactus had been decomposing in the fieldProportion of initial fresh mass remainingProportion of initial ash-free dry mass remainingcalcium content of cactuspotassium content of cactusmagnesium content of cactusmanganese content of cactussodium content of cactusphosphorus content of cactuswater content of cactusHemicellulose content of litter in cactusCellulose content of litter in cactusLignin content of litter in cactus, determined by sequential acid digestionCarbon content of cactusNitrogen content of cactusAromatic compound content of cactusLignin content of cactus, determined by py-GCMSLignin content of cactus, determined by py-GCMSPolysaccharide content of cactusN-Bearing compound content of cactusProtein content of cactusPhenolic compound content of cactusContent of remaining compounds of unknown origin
Storage Type:string  
string  
string  
float  
float  
float  
float  
float  
float  
float  
float  
float  
float  
float  
float  
float  
float  
float  
float  
float  
float  
float  
float  
float  
float  
float  
Measurement Type:nominalnominalnominalratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratio
Measurement Values Domain:
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeCholla
DefinitionCylindropuntia acanthocarpa (buckhorn cholla)
Source
Code Definition
CodePricklyPear
DefinitionOpuntia chlorotica (pancake prickly pear)
Source
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeA
Definitionreplicate block A
Source
Code Definition
CodeB
Definitionreplicate block B
Source
Code Definition
CodeC
Definitionreplicate block C
Source
Code Definition
CodeD
Definitionreplicate block D
Source
DefinitionNumber uniquely identifies each individual cactus segment per species
UnitnominalDay
Typewhole
Min
Max354 
Unitdimensionless
Typereal
Min0.022283 
Max
Unitdimensionless
Typereal
Min0.0939698 
Max1.0342392 
Unitdimensionless
Typereal
Min2.0808778 
Max10.5337043 
Unitdimensionless
Typereal
Min0.0749411 
Max2.7270609 
Unitdimensionless
Typereal
Min0.4566598 
Max2.2864883 
Unitdimensionless
Typereal
Min0.0027101 
Max0.047681 
Unitdimensionless
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Min0.0102275 
Max0.2586475 
Unitdimensionless
Typereal
Min0.0189596 
Max0.181391 
Unitdimensionless
Typereal
Min
Max89.9237403 
Unitdimensionless
Typereal
Min
Max64.2857143 
Unitdimensionless
Typereal
Min
Max25 
Unitdimensionless
Typereal
Min
Max8.3333333 
Unitdimensionless
Typereal
Min28.51 
Max38.32 
Unitdimensionless
Typereal
Min0.86 
Max1.86 
Unitdimensionless
Typereal
Min1.9494041 
Max10.8318071 
Unitdimensionless
Typereal
Min5.1412007 
Max48.6743654 
Unitdimensionless
Typereal
Min0.5065098 
Max48.6138702 
Unitdimensionless
Typereal
Min9.0964287 
Max29.126222 
Unitdimensionless
Typereal
Min1.2433106 
Max9.8336885 
Unitdimensionless
Typereal
Min1.9476787 
Max15.688959 
Unitdimensionless
Typereal
Min3.4025781 
Max23.2250264 
Unitdimensionless
Typereal
Min2.3657409 
Max15.5433694 
Missing Value Code:                                                    
Accuracy Report:                                                    
Accuracy Assessment:                                                    
Coverage:                                                    
Methods:                                                    

Data Package Usage Rights

This data package is released to the "public domain" under Creative Commons CC0 1.0 "No Rights Reserved" (see: https://creativecommons.org/publicdomain/zero/1.0/). The consumer of these data ("Data User" herein) has an ethical obligation to cite it appropriately in any publication that results from its use. The Data User should realize that these data may be actively used by others for ongoing research and that coordination may be necessary to prevent duplicate publication. The Data User is urged to contact the authors of these data if any questions about methodology or results occur. Where appropriate, the Data User is encouraged to consider collaboration or coauthorship with the authors. The Data User should realize that misinterpretation of data may occur if used out of context of the original study. While substantial efforts are made to ensure the accuracy of data and associated documentation, complete accuracy of data sets cannot be guaranteed. All data are made available "as is". The Data User should be aware, however, that data are updated periodically and it is the responsibility of the Data User to check for new versions of the data. The data authors and the repository where these data were obtained shall not be liable for damages resulting from any use or misinterpretation of the data. Thank you.

Keywords

By Thesaurus:
LTER controlled vocabularydecomposition, biogeochemistry, soil respiration, mineralization, nutrients, deserts
LTER core areasmovement of organic matter, movement of inorganic matter, water and fluxes
Creator Defined Keyword Setcactus, Cylindropuntia acanthocarpa, Opuntia chlorotica, sonoran desert
CAPLTER Keyword Set Listcap lter, cap, caplter, central arizona phoenix long term ecological research, arizona, az, arid land

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

Methods and protocols used in the collection of this data package
Description:
Cacti segments were clipped from two different species of cactus: Opuntia chlorotica (pancake prickly pear) and Cylindropuntia acanthocarpa (buckhorn cholla). The 48 clipped segments were taken to the laboratory in plastic clam shell containers, where initial weights of the entire cactus segments were recorded. Three 1.3-cm diameter cores, totaling approx. 2.5-5 g total wet weight, were taken from each segment for measurement of initial water content and chemistry. The core weight was subtracted from the overall segment weight to represent the initial wet weight of each segment for the onset of the experiment. Three days after collection, the cactus segments were then placed in the field on February 20, 2017. Litter cages (23 × 23 cm) were constructed with 10-cm tall sides made out of 2-mm carbon fiber window mesh, zip-tied around four nails in the ground to make a square perimeter, with an extra 2.5 cm flap nailed flush with the ground to avoid the sides lifting. Cages were topped with a nylon 4.5×5 cm mesh lid; the larger mesh was to prevent shading that could decrease natural amounts of photodegradation. Each cage contained one cactus segment from either species, placed directly in the center of the cage, and the area around the cactus weeded to avoid shading. The cages were arranged in four replicate blocks, with each block containing 12 cages: 6 cages with O. chlorotica and 6 with C. acanthocarpa. The cages were placed approximately 30 cm apart from each other on bare soil. Throughout the first month of the experiment, the cages were checked regularly, and any attempts at root generation were removed from the segments to ensure they died and decomposed. Germinating plants were removed from the cages as necessary. Decomposing cactus segments were collected on 5 different dates spanning 1 year: 39 d, 65 d, 119 d, 221 d, and 354 d. At each collection date, one segment of each species was randomly chosen from each replicate block, totaling 8 samples per collection date (four of each species). During the summer drought periods, some of the prickly pear segments were partially consumed by very persistent herbivores (presumably jackrabbits, Lepus californicus) who chewed through the cages, and if the randomly selected cactus had large portions missing with characteristic bite marks, we chose the nearest neighbor that was not. However, at 119-354 d, partially eaten segments were unavoidable for some replicate blocks. These replicates were not used in analyses of mass remaining but were included for plant chemistry. Segments were returned to the lab in their same plastic clam shell from original collection. In the lab, the entire fresh mass of each cactus segment was recorded. Cores of 1.3-cm diameter, totaling approx. 2.5 g, were taken from each segment. The cores and the remainder of the cactus segments were dried at 60 degrees C for 72 h and reweighed (the sum of which was the total dry weight of the entire segment). Cactus water content was calculated as the % of the fresh core mass that was lost during drying. The dried cactus cores were ground to a fine powder using a ball-mill grinder (SPEX Sample Prep Mixer/Mill 8000D). Total P, Na, Mn, Mg, K, and Ca were measured on the cactus samples using the dry ash acid method digestion, by which the cacti samples were ashed in a muffle oven that was gradually brought to 475 degrees C over 1.5 hours, held at 475 degrees C for 4 hours, then dropped to 105 degrees C. Then the cactus ash was weighed for calculation of ash-free dry mass (AFDM), then digested in 5 mL of 35% HNO3. The samples were then centrifuged for 10 minutes, and the supernatant diluted to 5% HNO3 for measurement via inductively coupled plasma optical emissions spectroscopy (ICP-OES; Thermo iCAP6300, Hudson NH). Total C and N were measured using an elemental analyzer (Perkin Elmer PE2400, Wattham MA). Other metabolic and structural compounds were analyzed using pyrolysis-gas chromatography and mass spectrometry (py-GCMS). Samples were first pyrolysed on a CDS Pyroprobe 5150 pyrolyzer at 600 degrees C for 20 s (CDS Analytical, Inc., Oxford, PA, USA). Pyrolysis products were then transferred automatically to a Thermo Trace GC Ultra gas chromatograph (Thermo Fisher Scientific, Austin, TX, USA) and Polaris Q ion trap mass spectrometer (Thermo Fisher Scientific). Mass spectra were analysed using Automated Mass Spectral Deconvolution and Identification System, (AMDIS, V 2.65) and the National Institute of Standards and Technology (NIST) compound library. Compound relative abundances calculated relative to the total ion signal from all detected and identified peaks. Individual compounds were analyzed separately and also arranged into the following functional groups: lignin, aromatic, phenols, polysaccharides, proteins, other nitrogen-bearing compounds, lipids, and compounds of unknown functional origin. Given the time and labor expenses of py-GCMS, samples were only run at specific sampling periods (days 0, 39, and 119) representing 100%, 75%, and 50% mass remaining.

People and Organizations

Publishers:
Organization:Environmental Data Initiative
Email Address:
info@environmentaldatainitiative.org
Web Address:
https://environmentaldatainitiative.org
Id:https://ror.org/0330j0z60
Creators:
Individual: Becky Ball
Organization:Arizona State University, West campus
Email Address:
Becky.Ball@asu.edu
Id:https://orcid.org/orcid.org/0000-0001-8592-1316
Individual: Miranda Vega
Organization:Arizona State University
Individual: Alexander Torres
Organization:Arizona State University
Contacts:
Organization:Central Arizona–Phoenix LTER
Position:Information Manager
Address:
Arizona State University,
Global Institute of Sustainability and Innovation,
Tempe, AZ 85287-5402 USA
Email Address:
caplter.data@asu.edu
Web Address:
https://sustainability-innovation.asu.edu/caplter/
Metadata Providers:
Individual: Becky Ball
Organization:Arizona State University, West campus
Email Address:
Becky.Ball@asu.edu
Id:https://orcid.org/orcid.org/0000-0001-8592-1316

Temporal, Geographic and Taxonomic Coverage

Temporal, Geographic and/or Taxonomic information that applies to all data in this dataset:

Time Period
Begin:
2017-02-01
End:
2019-12-01
Geographic Region:
Description:White Tank Mountains Regional Park within the CAP LTER study area of central Arizona, USA
Bounding Coordinates:
Northern:  33.73Southern:  33.34
Western:  -112.08Eastern:  -111.49
Taxonomic Range:
Classification:
Rank Name:kingdom
Rank Value:Plantae
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: 202422 (Plantae)
Classification:
Rank Name:subkingdom
Rank Value:Viridiplantae
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: 954898 (Viridiplantae)
Classification:
Rank Name:infrakingdom
Rank Value:Streptophyta
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: 846494 (Streptophyta)
Classification:
Rank Name:superdivision
Rank Value:Embryophyta
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: 954900 (Embryophyta)
Classification:
Rank Name:division
Rank Value:Tracheophyta
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: 846496 (Tracheophyta)
Classification:
Rank Name:subdivision
Rank Value:Spermatophytina
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: 846504 (Spermatophytina)
Classification:
Rank Name:class
Rank Value:Magnoliopsida
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: 18063 (Magnoliopsida)
Classification:
Rank Name:superorder
Rank Value:Caryophyllanae
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: 846539 (Caryophyllanae)
Classification:
Rank Name:order
Rank Value:Caryophyllales
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: 19520 (Caryophyllales)
Classification:
Rank Name:family
Rank Value:Cactaceae
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: 19685 (Cactaceae)
Classification:
Rank Name:genus
Rank Value:Cylindropuntia
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: 906970 (Cylindropuntia)
Classification:
Rank Name:species
Rank Value:Cylindropuntia acanthocarpa
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: 907736 (Cylindropuntia acanthocarpa)
Classification:
Rank Name:kingdom
Rank Value:Plantae
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: 202422 (Plantae)
Classification:
Rank Name:subkingdom
Rank Value:Viridiplantae
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: 954898 (Viridiplantae)
Classification:
Rank Name:infrakingdom
Rank Value:Streptophyta
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: 846494 (Streptophyta)
Classification:
Rank Name:superdivision
Rank Value:Embryophyta
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: 954900 (Embryophyta)
Classification:
Rank Name:division
Rank Value:Tracheophyta
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: 846496 (Tracheophyta)
Classification:
Rank Name:subdivision
Rank Value:Spermatophytina
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: 846504 (Spermatophytina)
Classification:
Rank Name:class
Rank Value:Magnoliopsida
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: 18063 (Magnoliopsida)
Classification:
Rank Name:superorder
Rank Value:Caryophyllanae
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: 846539 (Caryophyllanae)
Classification:
Rank Name:order
Rank Value:Caryophyllales
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: 19520 (Caryophyllales)
Classification:
Rank Name:family
Rank Value:Cactaceae
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: 19685 (Cactaceae)
Classification:
Rank Name:genus
Rank Value:Opuntia
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: 19686 (Opuntia)
Classification:
Rank Name:species
Rank Value:Opuntia chlorotica
Identifer:Integrated Taxonomic Information Service (ITIS)
Info for ID: 19697 (Opuntia chlorotica)

Project

Parent Project Information:

Title:Central Arizona–Phoenix Long-Term Ecological Research Project
Personnel:
Individual: Daniel Childers
Organization:Arizona State University
Email Address:
dan.childers@asu.edu
Id:https://orcid.org/0000-0003-3904-0803
Role:Principal Investigator
Individual: Nancy Grimm
Organization:Arizona State University
Email Address:
nbgrimm@asu.edu
Id:https://orcid.org/0000-0001-9374-660X
Role:Co-principal Investigator
Individual: Sharon Hall
Organization:Arizona State University
Email Address:
sharonjhall@asu.edu
Id:https://orcid.org/0000-0002-8859-6691
Role:Co-principal Investigator
Individual: Billie Turner II
Organization:Arizona State University
Email Address:
Billie.L.Turner@asu.edu
Id:https://orcid.org/0000-0002-6507-521X
Role:Co-principal Investigator
Individual: Abigail York
Organization:Arizona State University
Email Address:
Abigail.York@asu.edu
Id:https://orcid.org/0000-0002-2313-9262
Role:Co-principal Investigator
Abstract:Phase IV of the Central Arizona-Phoenix LTER (CAP) continues to focus on the question: How do the ecosystem services provided by urban ecological infrastructure (UEI) affect human outcomes and behavior, and how do human actions affect patterns of urban ecosystem structure and function and, ultimately, urban sustainability and resilience? The overarching goal is to foster social-ecological urban research aimed at understanding these complex systems using a holistic, ecology of cities perspective while contributing to an ecology for cities that enhances urban sustainability and resilience. This goal is being met through four broad programmatic objectives: (1) use long-term observations and datasets to articulate and answer new questions requiring a long-term perspective; (2) develop and use predictive models and future-looking scenarios to help answer research questions; (3) employ existing urban ecological theory while articulating new theory; and (4) build transdisciplinary partnerships to foster resilience and enhance sustainability in urban ecosystems while educating urban dwellers of all ages and experiences. CAP IV research is organized around eight interdisciplinary questions and ten long-term datasets and experiments, and researchers are organized into eight Interdisciplinary Research Themes to pursue these long-term research questions.
Funding: NSF Awards: CAP I: DEB-9714833, CAP II: DEB-0423704, CAP III: DEB-1026865, CAP IV: DEB-1832016
Additional Award Information:
Funder:National Science Foundation
Funder ID:https://ror.org/021nxhr62
Number:1832016
Title:LTER: CAP IV - Investigating urban ecology and sustainability through the lens of Urban Ecological Infrastructure
URL:https://nsf.gov/awardsearch/showAward?AWD_ID=1832016&HistoricalAwards=false
Other Metadata

EDI is a collaboration between the University of New Mexico and the University of Wisconsin – Madison, Center for Limnology:

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