Data Package Metadata   View Summary

Diatom Species Abundance Data from LTER Caribbean Karstic Region (CKR) study (FCE) in Yucatan, Belize and Jamaica during 2006, 2007, 2008

General Information
Data Package:
Local Identifier:knb-lter-fce.1159.3
Title:Diatom Species Abundance Data from LTER Caribbean Karstic Region (CKR) study (FCE) in Yucatan, Belize and Jamaica during 2006, 2007, 2008
Alternate Identifier:ST_PP_Lahee_001
Alternate Identifier:DOI PLACE HOLDER
Abstract:

Several studies have shown that within the Florida Coastal Everglades, periphyton mat properties, (incuding biomass, nutrient and organic content, and community composition) vary predictably in response to water quality.The Florida Coastal Everglades (FCE) wetland system is very similar with respect to climate, geology, hydrology and vegetation, to wetlands found in Jamaica, the Yucatan region of Mexico and parts of Belize. This study was therefore conducted to ascertain (i) the level of similarity between the periphyton diatom communities from karstic wetland sites in Belize, Mexico, Jamaica and comparable sites within the FCE, (ii) the relationship between periphyton biomass, TP levels and diatom community composition at these sites, and (iii) the feasibility of employing diatoms as indicators of water quality at these sites, using models relating diatom community composition to water quality from comparable sites within the FCE. Multiple wetland sites in Jamaica, the Yucatan region of Mexico and parts of Belize were visited between 2006 and 2008, during wet and dry seasons. At each site physico-chemical data were collected along with periphyton samples. The periphyton samples were processed in accordance with standard methods to obtain biomass, organic content and TP measures, and to identify and enumerate diatom and soft algae species. Various aspects of the diatom communities were then compared to previously compiled data on diatom communities from various parts of the FCE. SIMI analysis was used to determine the level of similarity between the systems and Non-Metric Multidimensional Scaling was used to identify relationships between diatom communities and water quality.

Publication Date:2024-02-27
For more information:
Visit: DOI PLACE HOLDER

Time Period
Begin:
2006-12-09
End:
2008-03-28

People and Organizations
Contact:Gaiser, Evelyn (Southeast Environmental Research Center, Primary Investigator) [  email ]
Contact:Information Manager (Florida Coastal Everglades LTER) [  email ]
Creator:Gaiser, Evelyn (Florida Coastal Everglades LTER Program, Primary Investigator)
Associate:Gaiser, Evelyn (Southeast Environmental Research Center, Project Collaborator)
Associate:Trexler, Joel (Florida Coastal Everglades LTER Program, Investigator)
Associate:Loftus, William (U.S. Geological Survey - FL Integrated Science Center, Investigator)
Associate:Ruehl, Clifton (Florida Coastal Everglades LTER Program, Investigator)
Associate:Urgulles, Raul (Florida Coastal Everglades LTER Program, Investigator)
Associate:Zambrano, Luis (Universidad Nacional Autonoma de Mexico (UNAM), Investigator)
Associate:La Hee, Josette (Florida Coastal Everglades LTER Program, Investigator)

Data Entities
Data Table Name:
ST_PP_Lahee_001
Description:
Diatom Species Abundance Data from LTER Caribbean Karstic Region (CKR) study (FCE) in Yucatan, Belize and Jamaica
Data Table Name:
ST_PP_Lahee_001_site_coordinates
Description:
Sampling site coordinates
Detailed Metadata

Data Entities


Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/knb-lter-fce/1159/3/49e2252c4733af69cb92f6db4a98dbf3
Name:ST_PP_Lahee_001
Description:Diatom Species Abundance Data from LTER Caribbean Karstic Region (CKR) study (FCE) in Yucatan, Belize and Jamaica
Number of Records:45
Number of Columns:150

Table Structure
Object Name:ST_PP_Lahee_001.csv
Size:34910 byte
Authentication:c8a46a1ebf6dcdfe21bfe5204530fe76 Calculated By MD5
Text Format:
Number of Header Lines:1
Record Delimiter:\n
Orientation:column
Simple Delimited:
Field Delimiter:,
Quote Character:"

Table Column Descriptions
 RegionSite_IDReplicate ID NumberSample datePercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom SpeciesPercent Abundance Diatom Species
Column Name:Region  
Site_ID  
Replicate  
Date  
ACEXSP  
ACJLS1  
ACMING  
ACMISA  
ACPEPE  
AMJLS1  
AMJLS3  
AMJLS6  
AMJLS7  
AMOVOV  
AMSULS  
ANJLS1  
ANSPHA  
ATPARA  
AUJLS1  
BRBREB  
BRJLS1  
BRNEON  
CACARI  
CAJLS1  
CMJLS1  
CNJLS1  
COPLAC  
CRJLS1  
CRJLS3  
CYJLS1  
CYMENM  
DIJLS2  
DIJLS3  
DIJLS4  
DIJLS6  
DIJLS7  
DIOBL2  
DIOBLO  
DIPARP  
ECJLSP1  
ECMICM  
ECSUMI  
ENEVEE  
ENFTSP  
ENSILE  
EPJLS2  
EUCAMC  
EUFLEF  
EUJLS2  
EUJLS5  
EUJLS6  
EUJLS9  
EUKARN  
EUMONM  
EUPIRL  
EURABE  
FANANN  
FASYNS  
FAULND  
FLCAGR  
FLCONS  
FLJLS1  
FLPYGM  
FRFASC  
FRJLS1  
FRRHOSP  
GOAFFA  
GOGRAG  
GOINTV  
GOJLS2  
GOMACL  
GOPARV  
GOVIBV  
HASPEC  
JLSP02  
JLSP05  
JLSP10  
JLSP11  
JLSP12  
MABRA1  
MABRA2  
MAELDA  
MAELEL  
MAJLS4  
MALANL  
MASMIL  
MASMIS  
NABRAS  
NACONS  
NACRYC  
NADENS  
NAHEIM  
NAJLS1  
NAJLS5  
NAJLS6  
NAJLS7  
NAJLS8  
NAPALI  
NAPSEU  
NAPUSI  
NARADR  
NASUBS  
NEDENS  
NEIMPL  
NEJLS1  
NIAMPA  
NIDENT  
NIJLS2  
NIJLS4  
NIJLS5  
NIJLS6  
NIJLS7  
NILACU  
NIMICR  
NINANN  
NIPALE  
NISCAL  
NISEMI  
NISERS  
NITUBI  
NIVIVA  
PAJLS1  
PGJLS1  
PIACRO  
PIJLS4  
PIJLS7  
PIJLS8  
PIJLS9  
PIMJL1  
PIMJL2  
PIMJL3  
PIMJL4  
PIMJL5  
PINEOM  
PISTOE  
PISTOS  
PLJLS1  
PRJLS1  
RHGIBG  
ROLINE  
SBCURV  
SEEULE  
SELALA  
SEPUAQ  
SEPUPP  
SLELEG  
SSPIPI  
STPHOP  
SUSMIN  
SYACAN  
Definition:Project DescriptorCollection Site ID Number1 to 7 replicate samples were collected from each siteSampling Collection DateAchnanthes exigua ,Author=Grun. in Cleve & Grun.,Year Described=1880Achnanthes jmlsp01 cf minutissimaAchnanthidium minutissimum,Author=Kutz.,Year Described=1833Achnanthidium minutissimum var saprophilaAchnanthes petersenii,Author=Hustedt,Year Described=1937Amphora jmlsp01Amphora jmlsp03Amphora jmlsp06Amphora jmlsp07Amphora ovalis,Author=(Kutz.) Kutz.,Year Described=1844Amphora sulcata,Author=Breb.,Year Described=1854Anomoeoneis jmlsp01 cf sphaerophoraAnomoeoneis sphaerophora,Author=(Ehrenb.) Pfitz.,Year Described=1871Actinella pararobusta,Author=Metzeltin and Lange-Bertalot,Year Described=1998Aulacoseira jmlsp01Brachysira brebissonii,Author=R. Ross in Hartley,Year Described=1986Brachysira jmlsp 01 SKMARN 4 MAR 208Brachysira neoexilisCaponea caribbeaCaloneis jmlsp01Cymbella jmlsp01Centric jmlsp01Cocconeis placentula,Author=Ehrenb.,Year Described=1838Craticula jmlsp01 cf cuspidataCraticula jmlsp03Cyclotella jmlsp01Cyclotella meneghiniana,Author=Kutz.,Year Described=1844Diploneis jmlsp02Diploneis jmlsp03Diploneis jmlsp04Diploneis jmlsp06Diploneis jmlsp07Diploneis oblongella_2Diploneis oblongella,Author=(Naegeli ex Kutz.) R. Ross,Year Described=1947Diploneis parma,Author=Cleve,Year Described=1891Encyonopsis jmlsp01Encyonopsis microcephalaEncyonopsis subminutaEncyonema evergladianumEncyonema ftspEncyonema silaciacum,Author=(Bleisch in Rabenhorst) Mann,Year Described=1990Epithemia jmlsp02Eunotia camelus_1Eunotia flexuosa,Author=Kutz,Year Described=1849Eunotia jmlsp02Eunotia jmlsp05Eunotia jmlsp06Eunotia jmlsp09Eunotia karenaeEunotia monodon_a,Author=Ehrenb.,Year Described=1843Eunotia pirla_b,Author=Carter et Flower,Year Described=1988Eunotia rabenhorstianaFragilaria nananaFragilaria syngrotescaFragilaria ulnaFragilaria capucina var gracilis,Author=Desm.,Year Described=1825Fragilaria construens,Author=(Ehrenb.) Grun.,Year Described=1862Frustulia jmlsp01Fallacia pygmaea,Author=(Kutz.) Stickle & Mann,Year Described=1990Fragilaria fascicula,Author=(Agardh) Lange-Bertalot sensu lato,Year Described=1980Fragilaria jmlsp01Frustulia rhomboides var. crassinerviaGomphonema affine,Author=Kutz.,Year Described=1844Gomphonema gracile,Author=Ehrenb.,Year Described=1838Gomphonema intricatum var. vibrio ,Author=(Ehrenb.) Cleve,Year Described=1894Gomphonema jmlsp02Gomphonema maclaughliniiGomphonema parvulum,Author=(Kutz.) Kutz.,Year Described=1849Gomphonema vibrioidesHantzschia spectabilis,Author=(Ehrenb.) Hust.,Year Described=1959Unknown sp02Unknown sp05Unknown sp10Unknown sp11Unknown sp12Mastogloia braunii,Author=Grun.,Year Described=1863Mastogloia cf braunii_2Mastogloia elliptica var danseii,Author=(Thwaites) Cleve,Year Described=1896Mastogloia elliptica,Author=(Ag.) Cleve ex A. Schmidt,Year Described=1893Mastogloia jmlsp04Mastogloia lanceolata,Author=Thwaites ex W. Sm.,Year Described=1856Mastogloia smithii var lacustris,Author=Grun.,Year Described=1878Mastogloia smithii,Author=Thwaites ex W. Sm.,Year Described=1856Navicula brasilianaNavicula constans,Author=Hust. in Lange-Bertalot,Year Described=1980Navicula cryptotenellaNavicula densilineolataNavicula heimansioidesNavicula jmlsp01Navicula jmlsp05Navicula jmlsp06Navicula jmlsp07Navicula jmlsp08Navicula palistinaeNavicula pseudocressirotrosNavicella pusillaNavicula radiosa,Author=Kutz.,Year Described=1844Navicula subtilissimaNeidium cf densestriatumNeidium cf impliatumNeidium jmlsp01 cf jubaNitzschia amphibia f amphibia,Author=Grunow,Year Described=1862Nitzschia denticula,Author=Grunow,Year Described=1880Nitzschia jmlsp02Nitzschia jmlsp04Nitzschia jmlsp05Nitzschia jmlsp06 thermaloidesNitzschia jmlsp07Nitzschia lacunarum,Author=Hust. in Lange-Bertalot,Year Described=1922Nitzschia cf microcephalaNitzschia nanaNitzschia palea,Author=(Kutz.) W. Sm.,Year Described=1856Nitzschia scalaris,Author=(Ehrenb.) W. Sm.,Year Described=1853Nitzschia semirobustaNitzschia serpentirapheNitzschia tubicolaNitzschia vivaciorParlibellus jmlsp01Plagiotropis jmlsp01Pinnularia acrosphaeria 02,Author=(Breb.) Rabenh.,Year Described=1853Pinnularia jmlsp04Pinnularia jmlsp07Pinnularia jmlsp08Pinnularia jmlsp09Pinnularia cf microstauron jmlsp01,Author=(Ehrenb.) Cleve,Year Described=1891Pinnularia cf microstauron jmlsp02,Author=(Ehrenb.) Cleve,Year Described=1891Pinnularia cf microstauron jmlsp03,Author=(Ehrenb.) Cleve,Year Described=1891Pinnularia cf microstauron jmlsp04,Author=(Ehrenb.) Cleve,Year Described=1891Pinnularia cf microstauron jmlsp05,Author=(Ehrenb.) Cleve,Year Described=1891Pinnularia cf neomajorPinnularia stoermeri_2Pinnularia streptoraphe morph 01,Author=Cleve,Year Described=1891Pleurosigma jmlsp01Proschkina jmlsp01Rhopalodia gibba,Author=(Ehrenb.) O. Mull.,Year Described=1895Rossithidium lineareStenopterobia curvulaSeminavis eulensteiniiSellophora laevissimaSellophora pupula var aquaeductaeSellophora pupila,Author=(Kutz.) Mereschkowsky,Year Described=1902Surrirella elegans,Author=Ehrenb.,Year Described=1843Staurosirella pinnata var pinnata,Author=(Ehrenb.) Williams & Round,Year Described=1987Stauroneis phoenicentron var jmlsp01,Author=(Nitzsch) Ehrenb.,Year Described=1943Stauroneis smithii var incisa,Author=Grun.,Year Described=1860Synedra acus var angustissima,Author=Kutz.,Year Described=1844
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Measurement Type:nominalnominalordinaldateTimeratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratioratio
Measurement Values Domain:
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeB
DefinitionBELIZE
Source
Code Definition
CodeY
DefinitionYUCATAN,MEXICO
Source
Code Definition
CodeJ
DefinitionJAMAICA
Source
Definitiontext
Definitiontext
FormatYYYY-MM-DD
Precision1
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Accuracy Report:                                                                                                                                                                                                                                                                                                            
Accuracy Assessment:                                                                                                                                                                                                                                                                                                            
Coverage:                                                                                                                                                                                                                                                                                                            
Methods:   Method Info                                                                                                                                                                                                                                                                                                        

Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/knb-lter-fce/1159/3/706848d7a911b2a0014bd9e3dbfa316c
Name:ST_PP_Lahee_001_site_coordinates
Description:Sampling site coordinates
Number of Records:37
Number of Columns:6

Table Structure
Object Name:ST_PP_Lahee_001_site_coordinates.csv
Size:2488 byte
Authentication:75eac93e3e531c2bfdf9db3539d9237f Calculated By MD5
Text Format:
Number of Header Lines:1
Record Delimiter:\r\n
Orientation:column
Simple Delimited:
Field Delimiter:,
Quote Character:"

Table Column Descriptions
 Full_site_nameRegionSite_IDDateLatitudeLongitude
Column Name:Full_site_name  
Region  
Site_ID  
Date  
Latitude  
Longitude  
Definition:Full site name with month and year visitedRegionSite IDSampling Collection DateLatitude in decimal degreesLongitude in decimal degrees
Storage Type:string  
string  
string  
dateTime  
float  
float  
Measurement Type:nominalnominalnominaldateTimeratioratio
Measurement Values Domain:
Definitiontext
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeB
DefinitionBelize
Source
Code Definition
CodeJ
DefinitionJamaica
Source
Code Definition
CodeY
DefinitionYucatan
Source
Definitiontext
FormatYYYY-MM-DD
Precision
Unitdegree
Typereal
Unitdegree
Typereal
Missing Value Code:            
Accuracy Report:            
Accuracy Assessment:            
Coverage:            
Methods:            

Data Package Usage Rights

This information is released under the Creative Commons license - Attribution - CC BY (https://creativecommons.org/licenses/by/4.0/). The consumer of these data ("Data User" herein) is required to cite it appropriately in any publication that results from its use. The Data User should realize that these data may be actively used by others for ongoing research and that coordination may be necessary to prevent duplicate publication. The Data User is urged to contact the authors of these data if any questions about methodology or results occur. Where appropriate, the Data User is encouraged to consider collaboration or co-authorship with the authors. The Data User should realize that misinterpretation of data may occur if used out of context of the original study. While substantial efforts are made to ensure the accuracy of data and associated documentation, complete accuracy of data sets cannot be guaranteed. All data are made available "as is." The Data User should be aware, however, that data are updated periodically and it is the responsibility of the Data User to check for new versions of the data. The data authors and the repository where these data were obtained shall not be liable for damages resulting from any use or misinterpretation of the data. Thank you.

Keywords

By Thesaurus:
LTER Core Research Areaspopulations, primary production
LTER Keyword ThesaurusFCE, Florida Coastal Everglades LTER, ecological research, long-term monitoring, productivity, periphyton, biomass, total phosphorus, TP, water quality, organic content, Belize, Jamaica, Yucatan, Karstic wetlands, diatoms, species, abundance, communities, pH, water

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

Methods and protocols used in the collection of this data package
Description:

Eleocharis wetland areas were located within the region of interest and before sampling was conducted, water chemistry measurements, including pH, conductivity, salinity and temperature, were taken. At each Eleocharis wetland site, seven 1m2 areas were sampled using 1m2 throw traps. At each plot, a photograph was taken to record the surface view of the quadrat and the cover of periphyton on dominant substrates estimated. Periphyton was then cleared from plot, placed onto a seine net and sorted to remove animals, plants and marl. Periphyton only samples were then measured using perforated 2000 ml graduated cylinder which excluded water, and the periphyton biovolume was recorded. Submersed plants were then measured in the graduated cylinder to produce a total biovolume (Periphyton plus submersed plant) biovolume. A subsample of 120 ml (volume of urine cup) of periphyton only material was removed and placed in a sterile sample bag and placed in a cooler with ice for transport to the lab. When no observable periphyton mat was present, flocculent detritus was sampled non-quantitatively from the benthos and/or epiphytic fils were scraped from any macrophytes present. In the laboratory, each periphyton sample (in its sample bag) was weighed and a wet weight plus bag value recorded. The sample was then transferred to clean beaker, homogenized in a few ml distilled water (enough to fully moisten). The total volume of the homogenized sample was then measured in a graduated cylinder and this volume recorded as the Total Volume. The dried sample bag was then weighed and a bag weight recorded. From the homogenized Total volume, a 50 ml subsample was poured into a pre-weighed aluminum pan, dried in an oven for 24 hours and later removed and weighed to produce a Periphyton dry mass (DW). This sample was then placed in a muffle furnace for 3 hours and again weighed to produce an ash weight (AW). A 50 ml subsample was removed, placed in a labeled 120 ml cup and placed in an oven until dry. The dried contents were then ground and analyzed for nutrients (total phosphorus, total nitrogen, total carbon). A 1 ml subsample was removed and placed in a microvial for soft algae analysis. A 10 ml subsample was removed, put in vial and frozen until oxidized and analyzed for diatom analysis. A 1 ml subsample was removed and filtered through a GFF filter which was then analyzed for chlorophyll a.

References:

Hasle, G R , G A Fryxell. 25842. Diatoms: Cleaning and mounting for light and electron microscopy. Transactions of the American Microscopical Society, 89(4): 469-474.

Solaranzo, L , J H Sharp. 29280. Determination of total dissolved phosphorus and particulate phosphorus in natural waters.. Limnology and Oceanography, 25: 754-758.

Welschmeyer, N A 34501. Fluorometric analysis of chlorophyll a in the presence of chlorophyll b and pheopigments. Limnology and Oceanography, 39(8): 1985-1992.

Instrument(s):Portable pH/Conductivity/Temperature meter, Waterproof digital camera, Portable GPS, Periphyton methods: Biohomogenizer, Hand held blender, Fume hood Hot plate, oven, muffle furnace, Gilman, fluorometer, Spectrophotometer, Carbon and Nitrogen analyzer (TC/TN, Perkin Elmer 2400 CHNSO)
Sampling Area and Study Extent
Sampling Description:

Eleocharis wetland areas were located within the region of interest and before sampling was conducted, water chemistry measurements, including pH, conductivity, salinity and temperature, were taken. At each Eleocharis wetland site, seven 1m2 areas were sampled using 1m2 throw traps. At each plot, a photograph was taken to record the surface view of the quadrat and the cover of periphyton on dominant substrates estimated. Periphyton was then cleared from plot, placed onto a seine net and sorted to remove animals, plants and marl. Periphyton only samples were then measured using perforated 2000 ml graduated cylinder which excluded water, and the periphyton biovolume was recorded. Submersed plants were then measured in the graduated cylinder to produce a total biovolume (Periphyton plus submersed plant) biovolume. A subsample of 120 ml (volume of urine cup) of periphyton only material was removed and placed in a sterile sample bag and placed in a cooler with ice for transport to the lab. When no observable periphyton mat was present, flocculent detritus was sampled non-quantitatively from the benthos and/or epiphytic fils were scraped from any macrophytes present. In the laboratory, each periphyton sample (in its sample bag) was weighed and a wet weight plus bag value recorded. The sample was then transferred to clean beaker, homogenized in a few ml distilled water (enough to fully moisten). The total volume of the homogenized sample was then measured in a graduated cylinder and this volume recorded as the Total Volume. The dried sample bag was then weighed and a bag weight recorded. From the homogenized Total volume, a 50 ml subsample was poured into a pre-weighed aluminum pan, dried in an oven for 24 hours and later removed and weighed to produce a Periphyton dry mass (DW). This sample was then placed in a muffle furnace for 3 hours and again weighed to produce an ash weight (AW). A 50 ml subsample was removed, placed in a labeled 120 ml cup and placed in an oven until dry. The dried contents were then ground and analyzed for nutrients (total phosphorus, total nitrogen, total carbon). A 1 ml subsample was removed and placed in a microvial for soft algae analysis. A 10 ml subsample was removed, put in vial and frozen until oxidized and analyzed for diatom analysis. A 1 ml subsample was removed and filtered through a GFF filter which was then analyzed for chlorophyll a.

Sampling Area And Frequency:

This study was conducted within multiple calcareous, shallow, short-hydroperiod, Eleocharis-dominated wetlands displaying similar characteristics in three countries. The areas visited included the New River Lagoon in Lamanai Outpost, Indian Church, Belize, the Slip River, Black River Morass, St. Elizabeth, Jamaica and the Sian Ka'an national Park, Quintana Roo, Mexico. Each wetland area was visited on two occasions intended to represent wet and dry seasons. The Mexico sites were visited in December 2006 ( which is typically a dry period but experienced high rainfall during 2006 and so served as a wet season sampling session) and March 2008 (which is typically a wet period but experienced low rainfall during 2008 and so served as a dry season sampling session). The Belize sites were visited in May 2007 (which served as a dry season sampling session and November 2007 (which served as a wet season sampling session). The Jamaica sites were visited in December 2007 (which served as a dry season sampling session) and March 2008 (which served as a wet season sampling session).

Quality Control
Quality Control Step 1: 
Description:

These methods, instrumentation, and/or protocols apply to the data table ST_PP_Lahee_001:

These methods, instrumentation and/or protocols apply to the data table column: Site_ID (Site_ID)
Methods and protocols used in the collection of this data package
Description:

Calculations: Each location may have more than one sample site and these are designated by numbers (e.g. EL1, EL2, EL3, represent three sites sampled Eddie's Lagoon)

People and Organizations

Publishers:
Organization:Environmental Data Initiative
Email Address:
info@edirepository.org
Web Address:
https://edirepository.org
Id:https://ror.org/0330j0z60
Creators:
Individual:Dr. Evelyn Gaiser
Organization:Florida Coastal Everglades LTER Program
Position:Primary Investigator
Address:
11200 S.W. 8th Street,
Miami, Florida 33199 USA
Phone:
305-348-6145 (voice)
Phone:
305-348-4096 (facsimile)
Email Address:
gaisere@fiu.edu
Web Address:
http://serc.fiu.edu/periphyton/
Id:https://orcid.org/0000-0003-2065-4821
Contacts:
Individual: Evelyn Gaiser
Organization:Southeast Environmental Research Center
Position:Primary Investigator
Address:
Florida International University,
University Park,
Miami, FL 33199 USA
Phone:
305-348-6145 (voice)
Phone:
305-348-4096 (facsimile)
Email Address:
gaisere@fiu.edu
Web Address:
http://serc.fiu.edu/periphyton/
Id:https://orcid.org/0000-0003-2065-4821
Organization:Florida Coastal Everglades LTER
Position:Information Manager
Address:
Florida International University,
11200 SW 8th Street, OE 148,
Miami, FL 33199 USA
Email Address:
fcelter@fiu.edu
Web Address:
https://fcelter.fiu.edu
Associated Parties:
Individual: Evelyn Gaiser
Organization:Southeast Environmental Research Center
Address:
Florida International University,
University Park,
OE 148,
Miami, FL 33199 USA
Phone:
305-348-6145 (voice)
Phone:
305-348-4096 (fax)
Email Address:
gaisere@fiu.edu
Web Address:
http://serc.fiu.edu/periphyton/
Role:Project Collaborator
Individual: Joel Trexler
Organization:Florida Coastal Everglades LTER Program
Address:
Florida International University,
University Park,
OE 217,
Miami, FL 33199 USA
Phone:
(305) 348-1966 (voice)
Phone:
(305) 348-1986 (fax)
Email Address:
trexlerj@fiu.edu
Role:Investigator
Individual: William Loftus
Organization:U.S. Geological Survey - FL Integrated Science Center
Address:
Everglades National Park Field Station, 40001 State Road 9336,
Homestead, FL 33034-6733 USA
Phone:
(305) 242-7835 (voice)
Phone:
(305) 242-7836 (fax)
Email Address:
bill_loftus@usgs.gov
Role:Investigator
Individual: Clifton Ruehl
Organization:Florida Coastal Everglades LTER Program
Address:
Florida International University,
University Park,
OE 167,
Miami, FL 33199 USA
Email Address:
clifton.ruehl@fiu.edu
Role:Investigator
Individual: Raul Urgulles
Organization:Florida Coastal Everglades LTER Program
Address:
Florida International University,
University Park,
OE 167,
Miami, FL 33199 USA
Role:Investigator
Individual: Luis Zambrano
Organization:Universidad Nacional Autonoma de Mexico (UNAM)
Address:
Apartado Postal 70-153, 04510,
Mexico, D.F., Mexico
Email Address:
zambrano@ibiologia.unam.mx
Role:Investigator
Individual: Josette La Hee
Organization:Florida Coastal Everglades LTER Program
Address:
Florida International University,
University Park,
OE 167,
Miami, FL 33199 USA
Email Address:
jlahe001@fiu.edu
Role:Investigator
Metadata Providers:
Organization:Florida Coastal Everglades LTER
Address:
Florida International University,
11200 SW 8th Street, OE 148,
Miami, FL 33199 USA
Phone:
305-348-6054 (voice)
Email Address:
fcelter@fiu.edu
Web Address:
https://fcelter.fiu.edu
Id:https://ror.org/03davk141

Temporal, Geographic and Taxonomic Coverage

Temporal, Geographic and/or Taxonomic information that applies to all data in this dataset:

Time Period
Begin:
2006-12-09
End:
2008-03-28
Sampling Site: 
Description:BEL2-Eddie's Lagoon2-May 2007
Site Coordinates:
Longitude (degree): -88.639Latitude (degree): 17.78
Sampling Site: 
Description:BEL3-Eddie's Lagoon3-May 2007
Site Coordinates:
Longitude (degree): -88.633Latitude (degree): 17.785
Sampling Site: 
Description:BNC2-Nico's Creek2-May 2007
Site Coordinates:
Longitude (degree): -88.646Latitude (degree): 17.735
Sampling Site: 
Description:BNRL1-New River Lagoon1-May 2007
Site Coordinates:
Longitude (degree): -88.654Latitude (degree): 17.738
Sampling Site: 
Description:BNRL2-New River Lagoon2-May 2007
Site Coordinates:
Longitude (degree): -88.641Latitude (degree): 17.755
Sampling Site: 
Description:BDC3-Dawson's Creek3-November 2007
Site Coordinates:
Longitude (degree): -88.641Latitude (degree): 17.759
Sampling Site: 
Description:BDC4-Dawson's Creek4-November 2007
Site Coordinates:
Longitude (degree): -88.641Latitude (degree): 17.751
Sampling Site: 
Description:BNC3-Nico's Creek3-November 2007
Site Coordinates:
Longitude (degree): -88.641Latitude (degree): 17.733
Sampling Site: 
Description:BNC4-Nico's Creek4-November 2007
Site Coordinates:
Longitude (degree): -88.626Latitude (degree): 17.73
Sampling Site: 
Description:BBC1-Bomb Crater1-November 2007
Site Coordinates:
Longitude (degree): -88.627Latitude (degree): 17.719
Sampling Site: 
Description:BBC2-Bomb Crater2-November 2007
Site Coordinates:
Longitude (degree): -88.627Latitude (degree): 17.715
Sampling Site: 
Description:BEL4-Eddie's Lagoon4-November 2007
Site Coordinates:
Longitude (degree): -88.634Latitude (degree): 17.784
Sampling Site: 
Description:BEL5-Eddie's Lagoon5-November 2007
Site Coordinates:
Longitude (degree): -88.633Latitude (degree): 17.779
Sampling Site: 
Description:BCC1-Crab Catcher1-November 2007
Site Coordinates:
Longitude (degree): -88.641Latitude (degree): 17.664
Sampling Site: 
Description:BCC2-Crab Catcher2-November 2007
Site Coordinates:
Longitude (degree): -88.643Latitude (degree): 17.661
Sampling Site: 
Description:BCC3-Crab Catcher3-November 2007
Site Coordinates:
Longitude (degree): -88.634Latitude (degree): 17.663
Sampling Site: 
Description:BLM1-Limonal1-November 2007
Site Coordinates:
Longitude (degree): -88.642Latitude (degree): 17.619
Sampling Site: 
Description:JDIGI-1-Digicel Tower Marsh1-May 2008
Site Coordinates:
Longitude (degree): -77.786Latitude (degree): 18.06
Sampling Site: 
Description:JSL1-Slipe River1-May 2008
Site Coordinates:
Longitude (degree): -77.783Latitude (degree): 18.064
Sampling Site: 
Description:JSL10-Slipe River10-December 2007
Site Coordinates:
Longitude (degree): -77.814Latitude (degree): 18.024
Sampling Site: 
Description:JSL2-Slipe River2-May 2008
Site Coordinates:
Longitude (degree): -77.814Latitude (degree): 18.026
Sampling Site: 
Description:JSL3-Slipe River3-May 2008
Site Coordinates:
Longitude (degree): -77.815Latitude (degree): 18.025
Sampling Site: 
Description:JSL4-Slipe River4-May 2008
Site Coordinates:
Longitude (degree): -77.81Latitude (degree): 18.026
Sampling Site: 
Description:JSL5-Slipe River5-December 2007
Site Coordinates:
Longitude (degree): -77.796Latitude (degree): 18.032
Sampling Site: 
Description:JSL6-Slipe River6-December 2007
Site Coordinates:
Longitude (degree): -77.796Latitude (degree): 18.032
Sampling Site: 
Description:JSL7-Slipe River7-December 2007
Site Coordinates:
Longitude (degree): -77.796Latitude (degree): 18.032
Sampling Site: 
Description:JSL8-Slipe River8-December 2007
Site Coordinates:
Longitude (degree): -77.813Latitude (degree): 18.025
Sampling Site: 
Description:JSL9-Slipe River9-December 2007
Site Coordinates:
Longitude (degree): -77.813Latitude (degree): 18.025
Sampling Site: 
Description:YPETN-Peten North-December 2006
Site Coordinates:
Longitude (degree): -87.692Latitude (degree): 19.801
Sampling Site: 
Description:YPETS-Peten South-December 2006
Site Coordinates:
Longitude (degree): -87.692Latitude (degree): 19.8
Sampling Site: 
Description:YMARN-Marisma North Side-December 2006
Site Coordinates:
Longitude (degree): -87.51Latitude (degree): 19.827
Sampling Site: 
Description:YMARN-Marisma North Side-March 2008
Site Coordinates:
Longitude (degree): -87.51Latitude (degree): 19.827
Sampling Site: 
Description:YDAHS-Dahlbergia South-December 2006
Site Coordinates:
Longitude (degree): -87.714Latitude (degree): 19.872
Sampling Site: 
Description:YMAH17-Mahahual 17-December 2006
Site Coordinates:
Longitude (degree): -87.96Latitude (degree): 18.972
Sampling Site: 
Description:YMAH17-Mahahual 17-March 2008
Site Coordinates:
Longitude (degree): -87.96Latitude (degree): 18.972
Sampling Site: 
Description:YMAH47-Mahahual 47-December 2006
Site Coordinates:
Longitude (degree): -87.75Latitude (degree): 18.787
Sampling Site: 
Description:YMAH47-Mahahual 47-March 2008
Site Coordinates:
Longitude (degree): -87.75Latitude (degree): 18.787
Taxonomic Range:
Classification:
Rank Name:Species
Rank Value:Achnanthes exigua Author=Grun. in Cleve & Grun.Year Described=1880
Classification:
Rank Name:Species
Rank Value:Achnanthes jmlsp01 cf minutissima
Classification:
Rank Name:Species
Rank Value:Achnanthidium minutissimumAuthor=Kutz.Year Described=1833
Classification:
Rank Name:Species
Rank Value:Achnanthidium minutissimum var saprophila
Classification:
Rank Name:Species
Rank Value:Achnanthes peterseniiAuthor=HustedtYear Described=1937
Classification:
Rank Name:Species
Rank Value:Amphora jmlsp01
Classification:
Rank Name:Species
Rank Value:Amphora jmlsp03
Classification:
Rank Name:Species
Rank Value:Amphora jmlsp06
Classification:
Rank Name:Species
Rank Value:Amphora jmlsp07
Classification:
Rank Name:Species
Rank Value:Amphora ovalisAuthor=(Kutz.) Kutz.Year Described=1844
Classification:
Rank Name:Species
Rank Value:Amphora sulcataAuthor=Breb.Year Described=1854
Classification:
Rank Name:Species
Rank Value:Anomoeoneis jmlsp01 cf sphaerophora
Classification:
Rank Name:Species
Rank Value:Anomoeoneis sphaerophoraAuthor=(Ehrenb.) Pfitz.Year Described=1871
Classification:
Rank Name:Species
Rank Value:Actinella pararobustaAuthor=Metzeltin and Lange-BertalotYear Described=1998
Classification:
Rank Name:Species
Rank Value:Aulacoseira jmlsp01
Classification:
Rank Name:Species
Rank Value:Brachysira brebissoniiAuthor=R. Ross in HartleyYear Described=1986
Classification:
Rank Name:Species
Rank Value:Brachysira jmlsp 01 SKMARN 4 MAR 208
Classification:
Rank Name:Species
Rank Value:Brachysira neoexilis
Classification:
Rank Name:Species
Rank Value:Caponea caribbea
Classification:
Rank Name:Species
Rank Value:Caloneis jmlsp01
Classification:
Rank Name:Species
Rank Value:Cymbella jmlsp01
Classification:
Rank Name:Species
Rank Value:Centric jmlsp01
Classification:
Rank Name:Species
Rank Value:Cocconeis placentulaAuthor=Ehrenb.Year Described=1838
Classification:
Rank Name:Species
Rank Value:Craticula jmlsp01 cf cuspidata
Classification:
Rank Name:Species
Rank Value:Craticula jmlsp03
Classification:
Rank Name:Species
Rank Value:Cyclotella jmlsp01
Classification:
Rank Name:Species
Rank Value:Cyclotella meneghinianaAuthor=Kutz.Year Described=1844
Classification:
Rank Name:Species
Rank Value:Diploneis jmlsp02
Classification:
Rank Name:Species
Rank Value:Diploneis jmlsp03
Classification:
Rank Name:Species
Rank Value:Diploneis jmlsp04
Classification:
Rank Name:Species
Rank Value:Diploneis jmlsp06
Classification:
Rank Name:Species
Rank Value:Diploneis jmlsp07
Classification:
Rank Name:Species
Rank Value:Diploneis oblongella_2
Classification:
Rank Name:Species
Rank Value:Diploneis oblongellaAuthor=(Naegeli ex Kutz.) R. RossYear Described=1947
Classification:
Rank Name:Species
Rank Value:Diploneis parmaAuthor=CleveYear Described=1891
Classification:
Rank Name:Species
Rank Value:Encyonopsis jmlsp01
Classification:
Rank Name:Species
Rank Value:Encyonopsis microcephala
Classification:
Rank Name:Species
Rank Value:Encyonopsis subminuta
Classification:
Rank Name:Species
Rank Value:Encyonema evergladianum
Classification:
Rank Name:Species
Rank Value:Encyonema ftsp
Classification:
Rank Name:Species
Rank Value:Encyonema silaciacumAuthor=(Bleisch in Rabenhorst) MannYear Described=1990
Classification:
Rank Name:Species
Rank Value:Epithemia jmlsp02
Classification:
Rank Name:Species
Rank Value:Eunotia camelus_1
Classification:
Rank Name:Species
Rank Value:Eunotia flexuosaAuthor=KutzYear Described=1849
Classification:
Rank Name:Species
Rank Value:Eunotia jmlsp02
Classification:
Rank Name:Species
Rank Value:Eunotia jmlsp05
Classification:
Rank Name:Species
Rank Value:Eunotia jmlsp06
Classification:
Rank Name:Species
Rank Value:Eunotia jmlsp09
Classification:
Rank Name:Species
Rank Value:Eunotia karenae
Classification:
Rank Name:Species
Rank Value:Eunotia monodon_aAuthor=Ehrenb.Year Described=1843
Classification:
Rank Name:Species
Rank Value:Eunotia pirla_bAuthor=Carter et FlowerYear Described=1988
Classification:
Rank Name:Species
Rank Value:Eunotia rabenhorstiana
Classification:
Rank Name:Species
Rank Value:Fragilaria nanana
Classification:
Rank Name:Species
Rank Value:Fragilaria syngrotesca
Classification:
Rank Name:Species
Rank Value:Fragilaria ulna
Classification:
Rank Name:Species
Rank Value:Fragilaria capucina var gracilisAuthor=Desm.Year Described=1825
Classification:
Rank Name:Species
Rank Value:Fragilaria construensAuthor=(Ehrenb.) Grun.Year Described=1862
Classification:
Rank Name:Species
Rank Value:Frustulia jmlsp01
Classification:
Rank Name:Species
Rank Value:Fallacia pygmaeaAuthor=(Kutz.) Stickle & MannYear Described=1990
Classification:
Rank Name:Species
Rank Value:Fragilaria fasciculaAuthor=(Agardh) Lange-Bertalot sensu latoYear Described=1980
Classification:
Rank Name:Species
Rank Value:Fragilaria jmlsp01
Classification:
Rank Name:Species
Rank Value:Frustulia rhomboides var. crassinervia
Classification:
Rank Name:Species
Rank Value:Gomphonema affineAuthor=Kutz.Year Described=1844
Classification:
Rank Name:Species
Rank Value:Gomphonema gracileAuthor=Ehrenb.Year Described=1838
Classification:
Rank Name:Species
Rank Value:Gomphonema intricatum var. vibrio Author=(Ehrenb.) CleveYear Described=1894
Classification:
Rank Name:Species
Rank Value:Gomphonema jmlsp02
Classification:
Rank Name:Species
Rank Value:Gomphonema maclaughlinii
Classification:
Rank Name:Species
Rank Value:Gomphonema parvulumAuthor=(Kutz.) Kutz.Year Described=1849
Classification:
Rank Name:Species
Rank Value:Gomphonema vibrioides
Classification:
Rank Name:Species
Rank Value:Hantzschia spectabilisAuthor=(Ehrenb.) Hust.Year Described=1959
Classification:
Rank Name:Species
Rank Value:Unknown sp02
Classification:
Rank Name:Species
Rank Value:Unknown sp05
Classification:
Rank Name:Species
Rank Value:Unknown sp10
Classification:
Rank Name:Species
Rank Value:Unknown sp11
Classification:
Rank Name:Species
Rank Value:Unknown sp12
Classification:
Rank Name:Species
Rank Value:Mastogloia brauniiAuthor=Grun.Year Described=1863
Classification:
Rank Name:Species
Rank Value:Mastogloia cf braunii_2
Classification:
Rank Name:Species
Rank Value:Mastogloia elliptica var danseiiAuthor=(Thwaites) CleveYear Described=1896
Classification:
Rank Name:Species
Rank Value:Mastogloia ellipticaAuthor=(Ag.) Cleve ex A. SchmidtYear Described=1893
Classification:
Rank Name:Species
Rank Value:Mastogloia jmlsp04
Classification:
Rank Name:Species
Rank Value:Mastogloia lanceolataAuthor=Thwaites ex W. Sm.Year Described=1856
Classification:
Rank Name:Species
Rank Value:Mastogloia smithii var lacustrisAuthor=Grun.Year Described=1878
Classification:
Rank Name:Species
Rank Value:Mastogloia smithiiAuthor=Thwaites ex W. Sm.Year Described=1856
Classification:
Rank Name:Species
Rank Value:Navicula brasiliana
Classification:
Rank Name:Species
Rank Value:Navicula constansAuthor=Hust. in Lange-BertalotYear Described=1980
Classification:
Rank Name:Species
Rank Value:Navicula cryptotenella
Classification:
Rank Name:Species
Rank Value:Navicula densilineolata
Classification:
Rank Name:Species
Rank Value:Navicula heimansioides
Classification:
Rank Name:Species
Rank Value:Navicula jmlsp01
Classification:
Rank Name:Species
Rank Value:Navicula jmlsp05
Classification:
Rank Name:Species
Rank Value:Navicula jmlsp06
Classification:
Rank Name:Species
Rank Value:Navicula jmlsp07
Classification:
Rank Name:Species
Rank Value:Navicula jmlsp08
Classification:
Rank Name:Species
Rank Value:Navicula palistinae
Classification:
Rank Name:Species
Rank Value:Navicula pseudocressirotros
Classification:
Rank Name:Species
Rank Value:Navicella pusilla
Classification:
Rank Name:Species
Rank Value:Navicula radiosaAuthor=Kutz.Year Described=1844
Classification:
Rank Name:Species
Rank Value:Navicula subtilissima
Classification:
Rank Name:Species
Rank Value:Neidium cf densestriatum
Classification:
Rank Name:Species
Rank Value:Neidium cf impliatum
Classification:
Rank Name:Species
Rank Value:Neidium jmlsp01 cf juba
Classification:
Rank Name:Species
Rank Value:Nitzschia amphibia f amphibiaAuthor=GrunowYear Described=1862
Classification:
Rank Name:Species
Rank Value:Nitzschia denticulaAuthor=GrunowYear Described=1880
Classification:
Rank Name:Species
Rank Value:Nitzschia jmlsp02
Classification:
Rank Name:Species
Rank Value:Nitzschia jmlsp04
Classification:
Rank Name:Species
Rank Value:Nitzschia jmlsp05
Classification:
Rank Name:Species
Rank Value:Nitzschia jmlsp06 thermaloides
Classification:
Rank Name:Species
Rank Value:Nitzschia jmlsp07
Classification:
Rank Name:Species
Rank Value:Nitzschia lacunarumAuthor=Hust. in Lange-BertalotYear Described=1922
Classification:
Rank Name:Species
Rank Value:Nitzschia cf microcephala
Classification:
Rank Name:Species
Rank Value:Nitzschia nana
Classification:
Rank Name:Species
Rank Value:Nitzschia paleaAuthor=(Kutz.) W. Sm.Year Described=1856
Classification:
Rank Name:Species
Rank Value:Nitzschia scalarisAuthor=(Ehrenb.) W. Sm.Year Described=1853
Classification:
Rank Name:Species
Rank Value:Nitzschia semirobusta
Classification:
Rank Name:Species
Rank Value:Nitzschia serpentiraphe
Classification:
Rank Name:Species
Rank Value:Nitzschia tubicola
Classification:
Rank Name:Species
Rank Value:Nitzschia vivacior
Classification:
Rank Name:Species
Rank Value:Parlibellus jmlsp01
Classification:
Rank Name:Species
Rank Value:Plagiotropis jmlsp01
Classification:
Rank Name:Species
Rank Value:Pinnularia acrosphaeria 02Author=(Breb.) Rabenh.Year Described=1853
Classification:
Rank Name:Species
Rank Value:Pinnularia jmlsp04
Classification:
Rank Name:Species
Rank Value:Pinnularia jmlsp07
Classification:
Rank Name:Species
Rank Value:Pinnularia jmlsp08
Classification:
Rank Name:Species
Rank Value:Pinnularia jmlsp09
Classification:
Rank Name:Species
Rank Value:Pinnularia cf microstauron jmlsp01Author=(Ehrenb.) CleveYear Described=1891
Classification:
Rank Name:Species
Rank Value:Pinnularia cf microstauron jmlsp02Author=(Ehrenb.) CleveYear Described=1891
Classification:
Rank Name:Species
Rank Value:Pinnularia cf microstauron jmlsp03Author=(Ehrenb.) CleveYear Described=1891
Classification:
Rank Name:Species
Rank Value:Pinnularia cf microstauron jmlsp04Author=(Ehrenb.) CleveYear Described=1891
Classification:
Rank Name:Species
Rank Value:Pinnularia cf microstauron jmlsp05Author=(Ehrenb.) CleveYear Described=1891
Classification:
Rank Name:Species
Rank Value:Pinnularia cf neomajor
Classification:
Rank Name:Species
Rank Value:Pinnularia stoermeri_2
Classification:
Rank Name:Species
Rank Value:Pinnularia streptoraphe morph 01Author=CleveYear Described=1891
Classification:
Rank Name:Species
Rank Value:Pleurosigma jmlsp01
Classification:
Rank Name:Species
Rank Value:Proschkina jmlsp01
Classification:
Rank Name:Species
Rank Value:Rhopalodia gibbaAuthor=(Ehrenb.) O. Mull.Year Described=1895
Classification:
Rank Name:Species
Rank Value:Rossithidium lineare
Classification:
Rank Name:Species
Rank Value:Stenopterobia curvula
Classification:
Rank Name:Species
Rank Value:Seminavis eulensteinii
Classification:
Rank Name:Species
Rank Value:Sellophora laevissima
Classification:
Rank Name:Species
Rank Value:Sellophora pupula var aquaeductae
Classification:
Rank Name:Species
Rank Value:Sellophora pupilaAuthor=(Kutz.) MereschkowskyYear Described=1902
Classification:
Rank Name:Species
Rank Value:Surrirella elegansAuthor=Ehrenb.Year Described=1843
Classification:
Rank Name:Species
Rank Value:Staurosirella pinnata var pinnataAuthor=(Ehrenb.) Williams & RoundYear Described=1987
Classification:
Rank Name:Species
Rank Value:Stauroneis phoenicentron var jmlsp01Author=(Nitzsch) Ehrenb.Year Described=1943
Classification:
Rank Name:Species
Rank Value:Stauroneis smithii var incisaAuthor=Grun.Year Described=1860
Classification:
Rank Name:Species
Rank Value:Synedra acus var angustissimaAuthor=Kutz.Year Described=1844

Project

Parent Project Information:

Title:Florida Coastal Everglades LTER: Coastal Oligotrophic Ecosystems Research-the Coastal Everglades
Personnel:
Individual: Daniel Childers
Role:Lead Principal Investigator
Abstract:

We are investigating how variability in regional climate, freshwater inputs, disturbance, and perturbations affect the coastal Everglades ecosystem. Our long term research program focuses on testing the following central idea and hypotheses: Regional processes mediated by water flow control population and ecosystem level dynamics at any location within the coastal Everglades landscape. This phenomenon is best exemplified in the dynamics of an estuarine oligohaline zone where fresh water draining phosphorus-limited Everglades marshes mixes with water from the more nitrogen-limited coastal ocean. Hypothesis 1: In nutrient-poor coastal systems, long-term changes in the quantity or quality of organic matter inputs will exert strong and direct controls on estuarine productivity, because inorganic nutrients are at such low levels. Hypothesis 2: Interannual and long-term changes in freshwater flow controls the magnitude of nutrients and organic matter inputs to the estuarine zone, while ecological processes in the freshwater marsh and coastal ocean control the quality and characteristics of those inputs. Hypothesis 3: Long-term changes in freshwater flow (primarily manifest through management and Everglades restoration) will interact with long-term changes in the climatic and disturbance (sea level rise, hurricanes, fires) regimes to modify ecological pattern and process across coastal landscapes.

Additional Award Information:
Funder:National Science Foundation
Funder ID:https://ror.org/021nxhr62
Number:9910514
Title:Florida Coastal Everglades LTER: Coastal Oligotrophic Ecosystems Research-the Coastal Everglades
URL:https://www.nsf.gov/awardsearch/showAward?AWD_ID=9910514
Related Project:
Title:FCE LTER II: Coastal Oligotrophic Ecosystems Research
Personnel:
Individual: Evelyn Gaiser
Id:https://orcid.org/0000-0003-2065-4821
Role:Lead Principal Investigator
Abstract:

Our FCE I research focused on understanding how dissolved organic matter from upstream oligotrophic marshes interacts with a marine source of phosphorus (P), the limiting nutrient, to control estuarine productivity where these two influences meet-in the oligohaline ecotone. This dynamic is affected by the interaction of local ecological processes and landscape-scale drivers (hydrologic, climatological, and human). During FCE I, our ideas about how these "upside-down" estuaries (Childers et al. 2006) function has evolved, and we have modified our central theme to reflect this new understanding. Our focus in FCE II will be even more strongly on the oligohaline ecotone region of our experimental transects. For FCE II, our overarching theme is: In the coastal Everglades landscape, population and ecosystem-level dynamics are controlled by the relative importance of water source, water residence time, and local biotic processes. This phenomenon is best exemplified in the oligohaline ecotone, where these 3 factors interact most strongly and vary over many [temporal and spatial] scales.Hypothesis 1: Increasing inputs of fresh water will enhance oligotrophy in nutrient-poor coastal systems, as long as the inflowing water has low nutrient content; this dynamic will be most pronounced in the oligohaline ecotone. Hypothesis 2: An increase in freshwater inflow will increase the physical transport of detrital organic matter to the oligohaline ecotone, which will enhance estuarine productivity. The quality of these allochthonous detrital inputs will be controlled by upstream ecological processes. Hypothesis 3: Water residence time, groundwater inputs, and tidal energy interact with climatic and disturbance regimes to modify ecological pattern and process in oligotrophic estuaries; this dynamic will be most pronounced in the oligohaline ecotone. Childers, D.L., J.N. Boyer, S.E. Davis, C.J. Madden, D.T. Rudnick, and F.H. Sklar, 2006. Relating precipitation and water management to nutrient concentration patterns in the oligotrophic "upside down" estuaries of the Florida Everglades. Limnology and Oceanography, 51(1): 602-616.

Additional Award Information:
Funder:National Science Foundation
Funder ID:https://ror.org/021nxhr62
Number:620409
Title:FCE LTER II: Coastal Oligotrophic Ecosystems Research
URL:https://www.nsf.gov/awardsearch/showAward?AWD_ID=0620409
Related Project:
Title:FCE LTER III: Coastal Oligotrophic Ecosystems Research
Personnel:
Individual: Evelyn Gaiser
Id:https://orcid.org/0000-0003-2065-4821
Role:Lead Principal Investigator
Abstract:

Coastal ecosystems are being modified at unprecedented rates through interacting

pressures of global climate change and rapid human population growth, impacting natural coastal

resources and the services they provide. Located at the base of the shallow-sloping Florida peninsula, the Everglades wilderness and 6 million human residents are exceptionally exposed to both pressures. Further, freshwater drainage has accelerated saltwater intrusion over land and into the porous limestone aquifer, resulting in coastal ecosystem transgression and seasonal residential freshwater shortages. The unprecedented landscape-scale Everglades restoration process is expected to reverse some of these trends. However, it is not clear how uncertainties about climate change prognoses and their impacts (e.g., sea level rise (SLR), changes in storm activity or severity, and climate drivers of freshwater availability) may influence human activities (e.g., population growth, resource use, land-use change), and how their interaction will affect the restoration process that is already steeped in conflict. The Florida Coastal Everglades Long-Term Ecological Research (FCE LTER) program is dedicated to long-term coupled biophysical and cultural studies that expose and unravel complex feedbacks that generate distinctive patterns and processes in vulnerable coastal ecosystems. The overarching theme of FCE research is: In the coastal Everglades, climate change and resource management decisions interact to influence

freshwater availability, ecosystem dynamics, and the value and utilization of ecosystem services by people. Because they are highly sensitive to the balance of freshwater and marine influences,

coastal wetlands of the Florida Everglades provide an ideal system to examine how socio-ecological systems respond to and mitigate the effects of climate change and freshwater allocation decisions. The trans-disciplinary science conducted by the large FCE research team is revealing how estuary hydrodynamics and biogeochemistry may tilt on a fulcrum defined by the magnitude by which coastal pressures (SRL, storms) are mitigated by freshwater flows. We employ a socio-ecological framework to address how climate change interacts with political decisions to determine the sustainability of interconnected human-natural systems. In FCE I, we discovered how coastal nutrient supplies create an unusual “upside-down” productivity gradient in karstic estuaries. FCE II research used growing long-term datasets to reveal the sensitivity of this gradient to changes in hydrodynamics, nutrient availability, and salinity. In FCE III, we will use South Florida as an exemplary system for understanding how and why socio-ecological systems resist, adapt to, or mitigate the effects of climate change on ecosystem sustainability. We will examine how decisions about freshwater delivery to the Everglades influence -and are influenced by - the impact of SLR in this especially vulnerable landscape. Biophysical studies will focus on how this balance of fresh and marine sources influences biogeochemical cycling, primary production, organic matter dynamics, and trophic dynamics, to drive carbon gains and losses. We expand our spatio-temporal domain by employing powerful long-term datasets and experiments to determine legacies of past interactions, and to constrain models that will help guide a sustainable future for the FCE.

Additional Award Information:
Funder:National Science Foundation
Funder ID:https://ror.org/021nxhr62
Number:1237517
Title:FCE LTER III: Coastal Oligotrophic Ecosystems Research
URL:https://www.nsf.gov/awardsearch/showAward?AWD_ID=1237517
Related Project:
Title:FCE LTER IV: Drivers of Abrupt Change in the Florida Coastal Everglades
Personnel:
Individual: Evelyn Gaiser
Role:Lead Principal Investigator
Abstract:

Coastal ecosystems like the Florida Everglades provide many benefits to society. They protect coastlines from storms and store carbon. They provide habitat and food for important fisheries. They also support tourism and local economies, and store freshwater for millions of people. The Florida Coastal Everglades Long Term Ecological Research (FCE LTER) program addresses how and why coastal ecosystems are changing in response to sea level rise and the actions of people. Like many coastal ecosystems, the Florida Everglades are threatened by the diversion of freshwater to support urban and agricultural expansion. At the same time, sea level rise has caused coastal ecosystems to become saltier, threatening the freshwater supply, stressing freshwater plants, and causing the soils to collapse. When the soils beneath coastal wetlands disappear, seawater invades even more quickly. Researchers in the FCE LTER are continuing long-term studies and experiments to understand how these changes influence ecosystem functions and services. They are also developing tools for resource managers to create an effective freshwater restoration program. The science team includes an active community of graduate students. As a group, they reach the public through education and outreach activities, and regularly advise policy-makers on resource management decisions. The FCE LTER research program addresses how changing fresh and marine supplies of water influence coastal ecosystem dynamics through: (i) continued long-term assessment of changes in biogeochemistry, primary production, organic matter, and trophic dynamics in ecosystems along freshwater-to-marine gradients, (ii) maintenance of existing in situ and ex situ long-term experiments, (iii) use of high-resolution remote sensing, coupled with models to forecast landscape-scale changes, (iv) addition of synoptic satellite sites to capture discrete spatio-temporal responses to episodic disturbance, and (v) initiation of new experimental manipulations to determine drivers and mechanisms of resilience to saltwater intrusion. Data syntheses integrate month-to-annual and inter-annual data into models of water, nutrients, carbon, and species dynamics throughout the Everglades landscape to compare how ecosystems with different productivities and carbon stores respond (maintain, increase, or decline) to short- (pulses) and long-term changes (presses) in hydrologic connectivity. Understanding and predicting the drivers of abrupt changes in ecosystems is a key challenge in ecosystem ecology.

Additional Award Information:
Funder:National Science Foundation
Funder ID:https://ror.org/021nxhr62
Number:1832229
Title:LTER: Drivers of Abrupt Change in the Florida Coastal Everglades
URL:https://www.nsf.gov/awardsearch/showAward?AWD_ID=1832229&HistoricalAwards=false
Related Project:
Title:LTER: Coastal Oligotrophic Ecosystem Research
Personnel:
Individual: John Kominoski
Address:
Florida International University,
11200 S.W. 8th Street,
Miami, FL 33199 US
Email Address:
jkominos@fiu.edu
Id:https://orcid.org/0000-0002-0978-3326
Role:Lead Principal Investigator
Individual: James Fourqurean
Role:Co-Principal Investigator
Individual: Evelyn Gaiser
Role:Co-Principal Investigator
Individual: Jennifer Rehage
Role:Co-Principal Investigator
Individual: Kevin Grove
Role:Co-Principal Investigator
Abstract:

Coastal ecosystems like the Florida Everglades provide many benefits and services to society including protection from storms, habitat and food for important fisheries, support of tourism and local economies, filtration of fresh water, and burial and storage of carbon that offsets greenhouse gas emissions. The Florida Coastal Everglades Long Term Ecological Research (FCE LTER) program addresses how and why coastal ecosystems and their services are changing. Like many coastal ecosystems, the Florida Everglades has been threatened by diversion of fresh water to support urban and agricultural expansion. At the same time, sea-level rise has caused saltwater intrusion of coastal ecosystems which stresses freshwater species, causes elevation loss, and contaminates municipal water resources. However, restoration of seasonal pulses of fresh water may counteract these threats. Researchers in the FCE LTER are continuing long-term studies and experiments to understand how changes in freshwater supply, sea-level rise, and disturbances like tropical storms interact to influence ecosystems and their services. The science team is guided by a diversity and inclusion plan to attract diverse scientists at all career stages. The team includes resource managers – who use discoveries and knowledge from the FCE LTER to guide effective freshwater restoration – and an active community of academic and agency scientists, teachers and other educators, graduate, undergraduate, and high school students. The project has a robust education and outreach program that engages the research team with the general public to advance science discoveries and protection of coastal ecosystems.

Additional Award Information:
Funder:National Science Foundation
Funder ID:https://ror.org/021nxhr62
Number:2025954
Title:LTER: Coastal Oligotrophic Ecosystem Research
URL:https://www.nsf.gov/awardsearch/showAward?AWD_ID=2025954&HistoricalAwards=false

Maintenance

Maintenance:
Description:

knb-lter-fce.1159.3: Updated metadata to EML 2.2.0, added creator ORCID and organization ROR ids, updated project information with award elements, corrected sampling location coordinates in metadata and moved from methods to dataset geographic coverage; added .csv extension to data file name (no changes to data), made site locations with coordinates available in a sampling locations file

knb-lter-fce.1159.2: Added new Data download URL and new FCE III Project information

knb-lter-fce.1159.1: This is a short-term primary production dataset and subsequent data will be appended. This dataset replaces all previous versions of ST_PP_Lahee_001 original. There is, at this time, no ongoing data collection for this project. Species information may periodically updated, and data files may be updated if the investigators think additional variables may be of use or if additional sampling sites are identified in the future. The FCE program is discontinuing its practice of versioning data as of March 2013.

Frequency:
Other Metadata

Additional Metadata

additionalMetadata
        |___text '\n      '
        |___element 'metadata'
        |     |___text '\n         '
        |     |___element 'unitList' in ns 'http://www.xml-cml.org/schema/stmml-1.2' ('stmml:unitList')
        |     |     |  \___attribute 'schemaLocation' in ns 'http://www.w3.org/2001/XMLSchema-instance' ('xsi:schemaLocation') = 'eml://ecoinformatics.org/eml-2.1.0 http://fcelter.fiu.edu/data/eml_schema/eml-2.1.0/stmml.xsd'
        |     |     |___text '\n            '
        |     |     |___element 'unit' in ns 'http://www.xml-cml.org/schema/stmml-1.2' ('stmml:unit')
        |     |     |     |  \___attribute 'id' = 'percent'
        |     |     |     |  \___attribute 'multiplierToSI' = '1'
        |     |     |     |  \___attribute 'name' = 'percent'
        |     |     |     |  \___attribute 'unitType' = 'dimensionless'
        |     |     |     |___text '\n               '
        |     |     |     |___element 'description' in ns 'http://www.xml-cml.org/schema/stmml-1.2' ('stmml:description')
        |     |     |     |     |___text 'ratio of two quantities as percent composition (1:100)'
        |     |     |     |___text '\n            '
        |     |     |___text '\n         '
        |     |___text '\n      '
        |___text '\n   '

Additional Metadata

additionalMetadata
        |___text '\n      '
        |___element 'metadata'
        |     |___text '\n         '
        |     |___element 'additionalDataset'
        |     |     |___text '\n            '
        |     |     |___element 'researchType'
        |     |     |     |___text 'Short-term'
        |     |     |___text '\n            '
        |     |     |___element 'addDistribution'
        |     |     |     |___text '\n               '
        |     |     |     |___element 'submissionDate'
        |     |     |     |     |___text '2009-09-02'
        |     |     |     |___text '\n            '
        |     |     |___text '\n            '
        |     |     |___element 'datasetPurpose'
        |     |     |     |___text '\n               '
        |     |     |     |___element 'para'
        |     |     |     |     |___text 'This study was conducted and the data compiled to ascertain (i) the level of similarity between the periphyton diatom communities from karstic wetland sites in Belize, Mexico, Jamaica and comparable sites within the FCE, (ii) the relationship between periphyton biomass, TP levels and diatom community composition at these sites, and (iii) the feasibility of employing diatoms as indicators of water quality at these sites, using models relating diatom community composition to water quality from comparable sites within the FCE.'
        |     |     |     |___text '\n            '
        |     |     |___text '\n            '
        |     |     |___element 'datasetSubmissionNotes'
        |     |     |     |___text '\n               '
        |     |     |     |___element 'notes'
        |     |     |     |     |___text 'This file contains diatom species counts for each of the sample sites. Diatom counts of at least 500 cells were done for each site, the species abundances were relativised to total count and are represented here as the percent abundance.'
        |     |     |     |___text '\n            '
        |     |     |___text '\n            '
        |     |     |___element 'datasetInfoManagementNotes'
        |     |     |     |___text '\n               '
        |     |     |     |___element 'notes'
        |     |     |     |     |___text 'This is a short-term primary production dataset and subsequent data wil be appended. This dataset replaces all previous versions of ST_PP_Lahee_001 original. There is, at this time, no ongoing data collection for this project. Species information may periodically updated, and data files may be updated if the investigators think additional variables may be of use or if additional sampling sites are identified in the future. The FCE program is discontinuing its practice of versioning data as of March 2013.'
        |     |     |     |___text '\n            '
        |     |     |___text '\n         '
        |     |___text '\n      '
        |___text '\n   '

Additional Metadata

additionalMetadata
        |___text '\n      '
        |___element 'metadata'
        |     |___text '\n         '
        |     |___element 'importedFromXML'
        |     |        \___attribute 'dateImported' = '2024-02-27'
        |     |        \___attribute 'filename' = 'knb-lter-fce.1159.2.xml'
        |     |___text '\n      '
        |___text '\n   '

Additional Metadata

additionalMetadata
        |___text '\n      '
        |___element 'metadata'
        |     |___text '\n         '
        |     |___element 'emlEditor'
        |     |        \___attribute 'app' = 'ezEML'
        |     |        \___attribute 'release' = '2024.02.21'
        |     |___text '\n      '
        |___text '\n   '

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