Data Package Metadata View Summary

Fish community data obtained from Antillean-Z fish trap deployment in the Eastern Gulf of Shark Bay, Australia from June 2013 to August 2013

General Information

Data Package:

Local Identifier:

knb-lter-fce.1188.4

Title:

Fish community data obtained from Antillean-Z fish trap deployment in the Eastern Gulf of Shark Bay, Australia from June 2013 to August 2013

Alternate Identifier:

ST_TDCS_Heithaus_001

Alternate Identifier:

DOI PLACE HOLDER

Abstract:

This dataset consists of capture data of teleost communities caught in Antillean-Z fish traps deployed in 2013. Also included are anciliary environmental data as well as trap deployment information. This dataset will be used to determine changes in teleost community structure and abundance in response to an extreme temperature event and associated decline in seagrass cover in Shark Bay, Western Australia.

Publication Date:

2023-01-25

For more information:
Visit:	http://fcelter.fiu.edu/perl/public_data_download.pl?datasetid=ST_TDCS_Heithaus_001.txt
Visit:	DOI PLACE HOLDER

Time Period

Begin:

2013-06-28

End:

2013-08-12

People and Organizations
Contact:	Information Manager (FCE LTER)
Contact:	Heithaus, Michael (Florida International University, Co-PI) [ email ]
Contact:	Nowicki, Robert (Florida International University, Graduate Student) [ email ]
Creator:	Heithaus, Michael (Florida International University, Co-PI)
Creator:	Nowicki, Robert (Florida International University, Graduate Student)
Associate:	Heithaus, Michael (Florida International University, Principle Investigator)
Associate:	Nowicki, Robert (Florida International University, Graduate Student)

Data Entities
Data Table Name:	ST_TDCS_Heithaus_001
Description:	Fish community data obtained from Antillean-Z fish trap deployment in the Eastern Gulf of Shark Bay, Australia

Detailed Metadata

Data Entities

Data Table


Data:	https://pasta-s.lternet.edu/package/data/eml/knb-lter-fce/1188/4/d967d72786ff81cfb225750e7d4d98a8
Name:	ST_TDCS_Heithaus_001
Description:	Fish community data obtained from Antillean-Z fish trap deployment in the Eastern Gulf of Shark Bay, Australia
Number of Records:	40
Number of Columns:	32

Table Structure

Object Name:

ST_TDCS_Heithaus_001.csv

Size:

5977 byte

Authentication:

e8f9fdb4d0d58f814f5fc246e66a0fd5 Calculated By MD5

Text Format:

Number of Header Lines:

Record Delimiter:

\r\n

Orientation:

column

Simple Delimited:

Field Delimiter:	,
Quote Character:	"

Table Column Descriptions

Identifier

Date

Identifier

Time

Identifier

depth

Notes

depth

Notes

Identifier

latitude

longitude

Latitude_DD

Longitude_DD

weather conditions

visibility

water temperature

% cover

Notes

number fish caught (all species)

# Pelates octolineatus caught

# Pentapoda vitta caught

# Monocanthus spp. Caught

# Upeneus tragula caught

# Lethrinus laticaudis caught

# Rhabdosargus sarba caught

# Monocanthus chinensus caught

Notes

Column Name:

Master_ID

Date

Trap_Num

Set_of_day

Time_in

Time_out

Total_time

Microhabitat

Deploy_Depth

Deploy_Depth_Notes

Retrieve_Depth

Retrieve_Depth_Notes

Substrate

SG_sp

GPS_25_raw

GPS_113_raw

Latitude_DD

Longitude_DD

Beaufort

UW_vis

Water_Temp

Cloud_Cover

Cloud_Cover_Notes

Num_Fish_Caught

Num_peloct

Num_penvit

Num_monspp

Num_upetra

Num_letlat

Num_rhasar

Num_monchi

Notes

Definition:

Unique ID of each trap

Date of trap deploy

Trap number for that day

Set number for the day

Time trap deployed

Time trap retrieved

Soak time for trap

Type of microhabitat

Depth at trap deploy

Notations about the Deploy Depth

Depth at trap retrieval

Notations about the Retrieve Depth

Substrate at deploy site

Seagrass present, if applicable

GPS latitude inside of 25 degees S

GPS longitude inside of 113 west

latitude of shark capture in decimal degrees

longitude of shark capture in decimal degrees

Beaufort weather scale conditions at deploy

Underwater visibility at deploy

Water temperature at deploy

Cloud cover at deploy

Notation about % cloud cover

# fish caught (all species)

# Pelates octolineatus caught

# Pentapoda vitta caught

# Monocanthus spp. Caught

# Upeneus tragula caught

# Lethrinus laticaudis caught

# Rhabdosargus sarba caught

# Monocanthus chinensus caught

General Notes about sampling event

Storage Type:

ordinal

Datetime

ordinal

datetime

text

data

text

data

text

coordinate

ordinal

data

text

data

text

Measurement Type:

nominal

dateTime

nominal

dateTime

nominal

ratio

nominal

ratio

nominal

ratio

ordinal

ratio

nominal

ratio

nominal

Measurement Values Domain:

Definition

Unique ID of each trap

Format	YYYY-MM-DD
Precision

Definition

Trap number for that day

Definition

Set number for the day

Format	hh:mm
Precision	1

Format	hh:mm
Precision	1

Format	hh:mm
Precision	1

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	Deep
Definition	Deep channel habitat
Source

Code Definition

Code	shallow
Definition	shallow seagrass bank habitat
Source

Unit	foot
Precision	0.1
Type	real

Definition

Notations about the Deploy Depth

Unit	foot
Precision	0.1
Type	real

Definition

Notations about the Retrieve Depth

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	sand
Definition	sand
Source

Code Definition

Code	SG
Definition	seagrass cover
Source

Code Definition

Code	sand / SG
Definition	mix of seagrass and sand cover
Source

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	Pos
Definition	Posidonia spp.
Source

Code Definition

Code	Amp
Definition	Amphibolis antarctica
Source

Code Definition

Code	Pos/Amp
Definition	Mix of both Posidonia spp. And Amphibolis antarctica
Source

Unit	degree
Precision	0.00001
Type	real

Unit	degree
Precision	0.00001
Type	real

Unit	degree
Precision	0.00001
Type	real

Unit	degree
Precision	0.00001
Type	real

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	1
Definition	light air, 2
Source

Unit	meter
Precision	0.1
Type	real

Unit	celsius
Precision	0.1
Type	real

Unit	percent
Precision	1
Type	integer

Definition

Notation about % cloud cover

Unit	number
Precision	1
Type	integer

Unit	number
Precision	1
Type	integer

Unit	number
Precision	1
Type	integer

Unit	number
Precision	1
Type	integer

Unit	number
Precision	1
Type	integer

Unit	number
Precision	1
Type	integer

Unit	number
Precision	1
Type	integer

Unit	number
Precision	1
Type	integer

Definition

General Notes about sampling event

Missing Value Code:

Code	-9999.0
Expl	Value will never be recorded

Code	-9999.0
Expl	Value will never be recorded

Code	-9999.0
Expl	Value will never be recorded

Code	-9999.0
Expl	Value will never be recorded

Code	-9999.0
Expl	Value will never be recorded

Code	-9999
Expl	Value will never be recorded

Code	-9999
Expl	Value will never be recorded

Code	-9999
Expl	Value will never be recorded

Code	-9999
Expl	Value will never be recorded

Code	-9999
Expl	Value will never be recorded

Code	-9999
Expl	Value will never be recorded

Code	-9999
Expl	Value will never be recorded

Code	-9999
Expl	Value will never be recorded

Accuracy Report:

Accuracy Assessment:

Coverage:

Methods:

Data Package Usage Rights

This information is released under the Creative Commons license - Attribution - CC BY (https://creativecommons.org/licenses/by/4.0/). The consumer of these data ("Data User" herein) is required to cite it appropriately in any publication that results from its use. The Data User should realize that these data may be actively used by others for ongoing research and that coordination may be necessary to prevent duplicate publication. The Data User is urged to contact the authors of these data if any questions about methodology or results occur. Where appropriate, the Data User is encouraged to consider collaboration or co-authorship with the authors. The Data User should realize that misinterpretation of data may occur if used out of context of the original study. While substantial efforts are made to ensure the accuracy of data and associated documentation, complete accuracy of data sets cannot be guaranteed. All data are made available "as is." The Data User should be aware, however, that data are updated periodically and it is the responsibility of the Data User to check for new versions of the data. The data authors and the repository where these data were obtained shall not be liable for damages resulting from any use or misinterpretation of the data. Thank you.

These data are classified as 'Type II' whereby original FCE LTER experimental data collected by individual FCE researchers to be released to restricted audiences according to terms specified by the owners of the data. Type II data are considered to be exceptional and should be rare in occurrence. The justification for exceptions must be well documented and approved by the lead PI and Site Data Manager. Some examples of Type II data restrictions may include: locations of rare or endangered species, data that are covered under prior licensing or copyright (e.g., SPOT satellite data), or covered by the Human Subjects Act, Student Dissertation data and those data related to the FCE LTER Program but not funded by the National Science Foundation (NSF) under LTER grants #DEB-9910514, and # DBI-0620409. Researchers that make use of Type II Data may be subject to additional restrictions to protect any applicable commercial or confidentiality interests. All publications based on this dataset must cite the data Contributor, the Florida Coastal Everglades Long-Term Ecological Research (LTER) Program and that this material is based upon work supported by the National Science Foundation through the Florida Coastal Everglades Long-Term Ecological Research program under Cooperative Agreements #DEB-1237517, #DBI-0620409, and #DEB-9910514. Additionally, two copies of the manuscript must be submitted to the Florida Coastal Everglades LTER Program Office, LTER Program Manager, Florida International University, Southeast Environmental Research Center, OE 148, University Park, Miami, Florida 33199. For a complete description of the FCE LTER Data Access Policy and Data User Agreement, please go to FCE Data Management Policy at http://fcelter.fiu.edu/data/DataMgmt.pdf and LTER Network Data Access Policy at http://fcelter.fiu.edu/data/core/data_user_agreement/distribution_policy.html.

Keywords

By Thesaurus:
(No thesaurus)	Shark Bay Eastern Gulf, World Heritage Site, ecological research, long-term monitoring, Antillean-Z fish trap deployment, fish, fish community, species, water temperature, cloud cover percentage, beaufort weather scale, FCE LTER, Florida Coastal Everglades LTER, microhabitat
LTER Controlled Vocabulary	populations

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

Methods and protocols used in the collection of this data package

Description:	Deployment of baited Antillean-Z fish traps to charactarize benthic teleost communities and quantify teleost abundances
Instrument(s):	Human observers on a 4.5 to 5.5 research vessel

Description:	Water temperature collected at trap deployment
Instrument(s):	Ship-based transducer

Description:	Weather conditions collected at trap deployment
Instrument(s):	Human observer using Beaufort scale

Description:	Water visibility
Instrument(s):	Human observer

Sampling Area and Study Extent

Sampling Description:

Deployment of baited Antillean-Z fish traps to charactarize benthic teleost communities and quantify teleost abundances

Sampling Area And Frequency:

Eastern Gulf of Shark Bay, Western Australia, North of Monkey Mia

Quality Control
Quality Control Step 1:

Description:

Data are checked against field notes and datasheets after entry. Data are visually inspected by graduate students and the PI to determine if any values are obviously in error.

People and Organizations

Publishers:

Organization:

Environmental Data Initiative

Email Address:

info@edirepository.org

Web Address:

https://edirepository.org

Id:

https://ror.org/0330j0z60

Creators:

Individual:

Dr. Michael Heithaus

Organization:

Florida International University

Position:

Co-PI

Address:

3000 NE 151 St, BBC, MSB 250A,

North Miami, FL 33181 USA

Phone:

305-919-4030 (voice)

Email Address:

heithaus@fiu.edu

Web Address:

http://www.fiu.edu/~heithaus/

Id:

https://orcid.org/0000-0002-3219-1003

Individual:

Mr. Robert Nowicki

Organization:

Florida International University

Position:

Graduate Student

Address:

3000 NE 151 St, BBC, MSB 250J,

North Miami, FL 33181 USA

Phone:

305-919-4030 (voice)

Email Address:

rnowi001@fiu.edu

Id:

https://orcid.org/0000-0001-7337-2110

Contacts:

Organization:

FCE LTER

Position:

Information Manager

Address:

Institute of Environment,

Florida International University,

Miami, FL 33199

Id:

https://ror.org/03davk141

Individual:

Dr. Michael Heithaus

Organization:

Florida International University

Position:

Co-PI

Address:

3000 NE 151st Street, BBC, MSB 250J,

North Miami, FL 33181 USA

Phone:

305-919-4030 (voice)

Email Address:

heithaus@fiu.edu

Individual:

Mr. Robert Nowicki

Organization:

Florida International University

Position:

Graduate Student

Address:

3000 NE 151st Street, BBC, MSB 250J,

North Miami, FL 33181 USA

Phone:

305-919-4030 (voice)

Email Address:

rnowi001@fiu.edu

Associated Parties:

Individual:

Dr. Michael Heithaus

Organization:

Florida International University

Address:

3000 NE 151 St, BBC, MSB 334,

North Miami, FL 33181 USA

Phone:

305-919-4030 (voice)

Email Address:

Heithaus@fiu.edu

Web Address:

http://www.fiu.edu/~heithaus/

Role:

Principle Investigator

Individual:

Mr Robert Nowicki

Organization:

Florida International University

Address:

3000 NE 151 St,

North Miami, FL 33181 USA

Phone:

305-919-4030 (voice)

Email Address:

rnowi001@fiu.edu

Role:

Graduate Student

Metadata Providers:

Individual:

Dr. Michael Heithaus

Organization:

Florida International University

Address:

3000 NE 151st Street,

North Miami, FL 33181 USA

Phone:

305-919-5234 (voice)

Email Address:

Heithaus@fiu.edu

Web Address:

https://www.sberp.org/

Temporal, Geographic and Taxonomic Coverage

Temporal, Geographic and/or Taxonomic information that applies to all data in this dataset:

Time Period

Begin:

2013-06-28

End:

2013-08-12

Geographic Region:

Description:

Eastern Gulf of Shark Bay, Western Australia. Study site is approximately 130 km2 in area and begins immediately north of Monkey Mia, in Shark Bay.

Bounding Coordinates:

Northern:	-25.721	Southern:	-25.808
Western:	113.662	Eastern:	113.796

Taxonomic Range:

Classification:

Rank Name:	Species
Rank Value:	Pelates octolineatus
Common Name:	Western striped trumpeter

Classification:

Rank Name:	Species
Rank Value:	Pentapodus vitta
Common Name:	Butterfish

Classification:

Rank Name:	Species
Rank Value:	Monocanthus chinensus
Common Name:	Fan-bellied leatherjacket

Classification:

Rank Name:	Species
Rank Value:	Rhabdosargus sarba
Common Name:	Tarwhine

Classification:

Rank Name:	Species
Rank Value:	Upeneus tragula
Common Name:	Freckled goatfish

Classification:

Rank Name:	Species
Rank Value:	Lethrinus laticaudis
Common Name:	Blue lined emperor

Classification:

Rank Name:	Genus
Rank Value:	Monocanthus spp.
Common Name:	Leather jackets

Project

Parent Project Information:

Title:

The ecological importance of intact top-predator populations

Personnel:

Individual:

Mike Heithaus

Organization:

Shark Bay Ecosystem Research Project

Position:

Lead Principal Investigator

Address:

Department of Biological Sciences,

Florida International University,

Biscayne Bay Campus,

MSB 250A,

Miami, FL 33199 USA

Phone:

305-919-5234 (voice)

Email Address:

Heithaus@fiu.edu

Role:

Lead Principal Investigator

Abstract:

We are investigating how the roles of apex predators (in this case, tiger sharks) can interact with large-scale climactic disturbances to influence the structure, function, and processes of seagrass ecosystems. This project investigates multiple questions related to this interaction, from primary produce recovery to apex predator population dynamics, including mutliple investigations into the effects of a large scale decline on tiger shark prey abundance, community composition, and behavior.

Funding:

National Science Foundation under Grant # 9910514

Additional Award Information:

Funder:

National Science Foundation

Funder ID:

https://ror.org/021nxhr62

Number:

9910514

Title:

LTER COERCE-Coastal Oligotrophic Ecosystems Research, the Everglades. Regional Controls of Population and Ecosystem Dynamics in an Oligotrophic Wetland-dominated Coastal Landscap

URL:

https://www.nsf.gov/awardsearch/showAward?AWD_ID=9910514

Related Project:

Title:

Effects of ecosystem disturbance on food for safety trade-offs in a relatively pristine ecosystem

Personnel:

Individual:

Mike Heithaus

Organization:

Shark Bay Ecosystem Research Project

Position:

Lead Principal Investigator

Address:

Department of Biological Sciences,

Florida International University,

Biscayne Bay Campus,

MSB 250A,

Miami, FL 33199 USA

Phone:

305-919-5234 (voice)

Email Address:

Heithaus@fiu.edu

Role:

Lead Principal Investigator

Abstract:

The purpose of this dataset and study is to quantify how teleost populations change in response to heavy losses of resource species in seagrass beds. These data are collected after a major seagrass disturbance that removed approximately 95% of seagrass present in the study area. These data are collected in an identical way to data collected prior to the decline (in 2004) to determine the impacts these declines will have on teleost populations. It is important to know the effects these declines have because (1) they can be indicative of potential effects on commercially important teleost species; (2) teleost mesograzers are important food sources for large predators in the system; (3) teleost mesograzers can consume seagrass preferentially, potentially altering recovery pathways of the seagrass commuities by consuming some species and facilitating others. These data will fill these knowledge gaps and provide a better understanding of how teleost communities respond to drastic, widespread declines in seagrass cover, which are becoming increasingly common worldwide.

Maintenance

Maintenance:

Description:

This is a Short-term environmental dataset collected in the Eastern Gulf of Shark Bay, Western Australia.

2023-01-25: Updated package to remove embargo and update metadata

Frequency:

notPlanned

Other Metadata

Additional Metadata

additionalMetadata
        |___text '\n    '
        |___element 'metadata'
        |     |___text '\n      '
        |     |___element 'unitList' in ns 'http://www.xml-cml.org/schema/stmml-1.1' ('stmml:unitList')
        |     |     |  \___attribute 'schemaLocation' in ns 'http://www.w3.org/2001/XMLSchema-instance' ('xsi:schemaLocation') = 'eml://ecoinformatics.org/eml-2.1.0 http://fcelter.fiu.edu/data/eml_schema/eml-2.1.0/stmml.xsd'
        |     |     |___text '\n        '
        |     |     |___element 'unit' in ns 'http://www.xml-cml.org/schema/stmml-1.1' ('stmml:unit')
        |     |     |     |  \___attribute 'id' = 'percent'
        |     |     |     |  \___attribute 'multiplierToSI' = '1'
        |     |     |     |  \___attribute 'name' = 'percent'
        |     |     |     |  \___attribute 'unitType' = 'dimensionless'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description' in ns 'http://www.xml-cml.org/schema/stmml-1.1' ('stmml:description')
        |     |     |     |     |___text 'ratio of two quantities as percent composition (1:100)'
        |     |     |     |___text '\n        '
        |     |     |___text '\n      '
        |     |___text '\n    '
        |___text '\n  '

Additional Metadata

additionalMetadata
        |___text '\n    '
        |___element 'metadata'
        |     |___text '\n      '
        |     |___element 'additionalDataset'
        |     |     |___text '\n        '
        |     |     |___element 'researchType'
        |     |     |     |___text 'Short-term'
        |     |     |___text '\n        '
        |     |     |___element 'DatasetDistributionTypeandRestrictions'
        |     |     |     |___text 'Type 2: Dissertation Data'
        |     |     |___text '\n        '
        |     |     |___element 'addDistribution'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'submissionDate'
        |     |     |     |     |___text '2014-02-25'
        |     |     |     |___text '\n        '
        |     |     |___text '\n        '
        |     |     |___element 'LTERsites'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'sitename'
        |     |     |     |     |___text 'Shark Bay Marine Park'
        |     |     |     |___text '\n        '
        |     |     |___text '\n        '
        |     |     |___element 'projectPermits'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'permit'
        |     |     |     |     |___text 'Australian DEC permit SF009325'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'permit'
        |     |     |     |     |___text 'Australian DEC permit SF008677'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'permit'
        |     |     |     |     |___text 'W. Australia Dep. Of Fisheries permit 2228'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'permit'
        |     |     |     |     |___text 'IACUC-13-022-CR01'
        |     |     |     |___text '\n        '
        |     |     |___text '\n      '
        |     |___text '\n    '
        |___text '\n  '

Additional Metadata

additionalMetadata
        |___text '\n    '
        |___element 'metadata'
        |     |___text '\n      '
        |     |___element 'fetchedFromEDI'
        |     |        \___attribute 'dateFetched' = '2023-01-24'
        |     |        \___attribute 'packageID' = 'knb-lter-fce.1188.3'
        |     |___text '\n    '
        |___text '\n  '

Additional Metadata

additionalMetadata
        |___text '\n    '
        |___element 'metadata'
        |     |___text '\n      '
        |     |___element 'importedFromXML'
        |     |        \___attribute 'dateImported' = '2023-01-24'
        |     |        \___attribute 'filename' = 'knb-lter-fce.1188.3.xml'
        |     |___text '\n    '
        |___text '\n  '

Additional Metadata

additionalMetadata
        |___text '\n    '
        |___element 'metadata'
        |     |___text '\n      '
        |     |___element 'emlEditor'
        |     |        \___attribute 'app' = 'ezEML'
        |     |        \___attribute 'release' = '2023.01.18'
        |     |___text '\n    '
        |___text '\n  '

Copyright 2024 Environmental Data Initiative. This material is based upon work supported by the National Science Foundation under grants #2223103 and #2223104. Any opinions, findings, conclusions, or recommendations expressed in the material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation. Please contact us with questions, comments, or for technical assistance regarding this web site or the Environmental Data Initiative. Please read our privacy policy to know what information we collect about you and to understand your privacy rights.

EDI is a collaboration between the University of New Mexico and the University of Wisconsin – Madison, Center for Limnology:

Data Package Metadata View Summary

Fish community data obtained from Antillean-Z fish trap deployment in the Eastern Gulf of Shark Bay, Australia from June 2013 to August 2013

Data Entities

Data Table

Data Package Usage Rights

Keywords

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

People and Organizations

Temporal, Geographic and Taxonomic Coverage

Project

Parent Project Information:

Maintenance

Additional Metadata

Additional Metadata

Additional Metadata

Additional Metadata

Additional Metadata

Recently Added

Recently Updated

Data Package Metadata View Summary

Fish community data obtained from Antillean-Z fish trap deployment in the Eastern Gulf of Shark Bay, Australia from June 2013 to August 2013

+/- Data Entities

Data Table

+/- Data Package Usage Rights

+/- Keywords

+/- Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

+/- People and Organizations

+/- Temporal, Geographic and Taxonomic Coverage

+/- Project

Parent Project Information:

+/- Maintenance

+/- Additional Metadata

+/- Additional Metadata

+/- Additional Metadata

+/- Additional Metadata

+/- Additional Metadata

Data Entities

Data Package Usage Rights

Keywords

Methods and Protocols

People and Organizations

Temporal, Geographic and Taxonomic Coverage

Project

Maintenance

Additional Metadata

Additional Metadata

Additional Metadata

Additional Metadata

Additional Metadata