Data Package Metadata   View Summary

Periphyton and Associated Environmental Data Relative from Samples Collected from the Greater Everglades from September 2005 to November 2014

General Information
Data Package:
Local Identifier:knb-lter-fce.1210.2
Title:Periphyton and Associated Environmental Data Relative from Samples Collected from the Greater Everglades from September 2005 to November 2014
Alternate Identifier:FCE1210_CERP_PeriphytonEnv
Alternate Identifier:DOI PLACE HOLDER
Abstract:

This data package contains peripihyton and environmental data collected annually during the wet season between 2005 and 2014 from sites distributed throughout the greater Everglades ecosystem. This project is part of the Comprehensive Everglades Restoration Program's Monitoring and Assessment Plan intended to document baseline variability in periphyton attributes for assessing the effectiveness of restoration projects. A total of 200 primary sampling units (PSU) of 800 m x 800 m are nested in 32 landscape units and each year, random coordinates are 'drawn' within each PSU and one sampleable draw is visited in each. Sampled periphyton is processed for diatoms, slides are prepared, and 500 frustules are enumerated and identified to the lowest possible taxonomic resolution per slide. Taxon abundances are then relativized to the total count. These data accompany environmental, periphyton biomass, and soft algal abundance datasets.

Publication Date:2022-04-27
For more information:
Visit: https://fce-lter.fiu.edu/perl/public_data_download.pl?datasetid=FCE1210_CERP_PeriphytonEnv.csv
Visit: DOI PLACE HOLDER

Time Period
Begin:
2005-09-14
End:
2014-11-14

People and Organizations
Contact:Information Manager (Florida Coastal Everglades LTER Program) [  email ]
Contact:Information Manager (Florida Coastal Everglades LTER Program) [  email ]
Creator:Gaiser, Evelyn (Florida Coastal Everglades LTER Program, Principal Investigator)
Associate:Kamener, Gabriel  (Florida International University, Information Manager - Periphyton Laboratory)

Data Entities
Data Table Name:
FCE1210_CERP_PeriphytonEnv.csv
Description:
Periphyton data collected for CERP study by FCE LTER personnel
Detailed Metadata

Data Entities


Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/knb-lter-fce/1210/2/6ee873bbbbc8f232053fce1dddff2a11
Name:FCE1210_CERP_PeriphytonEnv.csv
Description:Periphyton data collected for CERP study by FCE LTER personnel
Number of Records:5836
Number of Columns:57

Table Structure
Object Name:FCE1210_CERP_Periphyton.csv
Size:1837 KB
Authentication:1a8c18ae9e5ba88e76fbad217b42d5af Calculated By MD5
Character Encoding:UTF-8
Text Format:
Number of Header Lines:1
Record Delimiter:\r\n
Orientation:column
Simple Delimited:
Field Delimiter:,

Table Column Descriptions
 Date_Project_PSU_Draw_Replicate_Episodesampling datelocationsite within locationreplicatesample groupeasting coordinatenorthing coordinatesample regionlandscape sampling unitlandscape sampling unit nameWATER_DEPTH_CMSURFACE_WATER_PHSURFACE_WATER_COND_US_PER_CMSOIL_DEPTH_CMSOIL_TYPEPERI_TYPEPERI_PLUS_SUBMERSED_PLANT_VOL_ML_PER_M2PERI_VOL_ML_PER_M2PERI_SAMPLE_VOL_MLPERI_AERIAL_PCT_COVERQUANTITATIVEBENTHIC_PERI_PCT_OF_SAMPLEBENTHIC_PERI_PCT_COVEREPIPHYTIC_PERI_PCT_OF_SAMPLEEPIPHYTIC_PERI_PCT_COVEREPIPHYTIC_SP1EPIPHYTIC_SP2EPIPHYTIC_SP3FLOATING_PERI_PCT_OF_SAMPLEFLOATING_PERI_PCT_COVERFLOATING_SP1FLOATING_SP2GREEN_ALGAE_PCT_OF_SAMPLEGREEN_ALGAE_SUBSTRATE_SP1FLOC_PCT_OF_SAMPLEPERI_TP_UG_PER_G_DRY_MASSPERI_DRY_G_PER_M2PERI_AFDM_G_PER_M2PERI_PROP_ORGANICCHLA_UG_PER_M2DEPTHDEPTH_AVE_30DAYDEPTH_AVE_60DAYDEPTH_AVE_90DAYDEPTH_AVE_180DAYDEPTH_AVE_365DAYDSLDDDRY_LENLASTDAYDRYYEARLENGTHHYDROPERIOD5CMDEPTHLAG30DEPTHLAG60DEPTHLAG90HYDROPERIOD_ANNUALHYDROPERIOD_MEAN
Column Name:TAG-ID  
OBS_DATE  
PRIMARY_SAMPLING_UNIT  
DRAW  
FIELD_REPLICATE  
EPISODE  
EASTING_UTM  
NORTHING_UTM  
WETLAND_BASIN  
LSU  
LSU_NAME  
WATER_DEPTH_CM  
SURFACE_WATER_PH  
SURFACE_WATER_COND_US_PER_CM  
SOIL_DEPTH_CM  
SOIL_TYPE  
PERI_TYPE  
PERI_PLUS_SUBMERSED_PLANT_VOL_ML_PER_M2  
PERI_VOL_ML_PER_M2  
PERI_SAMPLE_VOL_ML  
PERI_AERIAL_PCT_COVER  
QUANTITATIVE  
BENTHIC_PERI_PCT_OF_SAMPLE  
BENTHIC_PERI_PCT_COVER  
EPIPHYTIC_PERI_PCT_OF_SAMPLE  
EPIPHYTIC_PERI_PCT_COVER  
EPIPHYTIC_SP1  
EPIPHYTIC_SP2  
EPIPHYTIC_SP3  
FLOATING_PERI_PCT_OF_SAMPLE  
FLOATING_PERI_PCT_COVER  
FLOATING_SP1  
FLOATING_SP2  
GREEN_ALGAE_PCT_OF_SAMPLE  
GREEN_ALGAE_SUBSTRATE_SP1  
FLOC_PCT_OF_SAMPLE  
PERI_TP_UG_PER_G_DRY_MASS  
PERI_DRY_G_PER_M2  
PERI_AFDM_G_PER_M2  
PERI_PROP_ORGANIC  
CHLA_UG_PER_M2  
DEPTH  
DEPTH_AVE_30DAY  
DEPTH_AVE_60DAY  
DEPTH_AVE_90DAY  
DEPTH_AVE_180DAY  
DEPTH_AVE_365DAY  
DSLDD  
DRY_LEN  
LASTDAYDRY  
YEARLENGTH  
HYDROPERIOD5CM  
DEPTHLAG30  
DEPTHLAG60  
DEPTHLAG90  
HYDROPERIOD_ANNUAL  
HYDROPERIOD_MEAN  
Definition:Sample tag IDDate observation made in fieldprimary sampling unit identifierDraw site within primary sampling unitThe sample replicate within a drawSampling episodeLongitude coordinates of draw siteLatitude coordinates of draw siteEverglades water management unitlandscape sampling unitlandscape sampling unit nameAverage water depth of 3 measurements representative of replicatepH of water sample upon return to the lab; meters used (followed by years of use) include YSI generic pH/conductivity meter - 2005-2007, Orion model 250A portable meter - 2008, generic pH/conductivity probe - 2009-2014, Accumet AP85 pH/conductivity/TDS/°C/°F meter - 2015-2018, Oakton PC 450 - 2018-2021Conductivity of water sample upon return to the lab; meters used (followed by years of use) include YSI generic pH/conductivity meter - 2005-2007, Orion model 250A portable meter - 2008, generic pH/conductivity probe - 2009-2014, Accumet AP85 pH/conductivity/TDS/°C/°F meter - 2015-2018, Oakton PC 450 - 2018-2021Depth of soil up to 100 cmVisual categorization of soil as mostly rock (no soil) (1), marl (2), peat (3), or sand (4)Visual categorization of periphyton as either mostly calcareous (1), mostly organic (3), or a mix of both (2)Volume of periphyton and any attached substrate in perforated graduated cylinderVolume of periphyton with most substrate removed in perforated graduated cylinderVolume of homogenized periphyton removed for sampleVisual estimate of the amount of periphyton covering the surface of the wetlandPeriphyton sample permits biovolume (mL/m2) calculationPercent of the homogenized sample containing periphyton removed from the bottom of the wetlandPercent of the bottom of the wetland covered with periphytonPercent of the homogenized sample containing periphyton removed from plantsPercent of plant stems and leaves covered with periphytonCode name of first plant taxon supporting epiphytic periphytonCode name of second plant taxon supporting epiphytic periphytonCode name of third plant taxon supporting epiphytic periphytonPercent of the homogenized sample containing periphyton removed from the water surfacePercent of the water surface covered with periphytonCode name of first plant taxon supporting floating periphytonCode name of second plant taxon supporting floating periphytonPercent of the homogenized sample containing filamentous green algeCode name of plant taxon supporting green algaePercent of the homogenized sample containing flocculent detrtital material (floc)Concentration of total phosphorus per dried gram of periphytonPeriphyton dry mass in grams per square meterPeriphyton ash-free dry mass in grams per square meterPeriphyton proportion organic content Chlorophyll a of periphyton in micrograms per square meterCORRECTED EDEN DEPTH AFTER APPLYING MEAN OFFSET OF ALL OBSERVED DEPTHS AT SITE30 DAY MOVING AVERAGE DEPTH60 DAY MOVING AVERAGE DEPTH90 DAY MOVING AVERAGE DEPTH180 DAY MOVING AVERAGE DEPTH365 DAY MOVING AVERAGE DEPTHDAYS SINCE LAST DRY DOWN <=5cmDURATION OF DRYING EVENT @ 5CMLength in days of current or previous drying event <= 5 cmCumulative sum of HYDROPERIOD5CM + HYDROCOUNT variables within a yearNUMBER OF DAYS DEPTH MEASURED >5CM, RESETS EACH YEARDEPTH OF MARSH 30 DAYS AGODEPTH OF MARSH 60 DAYS AGODEPTH OF MARSH 90 DAYS AGOMAX VALUE OF HYDROPERIOD5CM FOR EACH YEARMEAN HYDROPERIOD LENGTH FOR EACH SITE ACROSS ENTIRE TIME SERIES
Storage Type:Text  
Date  
Text  
Text  
Code  
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coordinate  
coordinate  
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Data  
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Text  
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Measurement Type:nominaldateTimeordinalordinalordinalordinalordinalordinalnominalnominalnominalnominalnominalnominalnominalordinalordinalnominalnominalnominalnominalordinalnominalnominalnominalnominalordinalordinalordinalnominalnominalordinalordinalnominalordinalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominal
Measurement Values Domain:
DefinitionSample tag ID
FormatYYYY-MM-DD
Precision
Definitionprimary sampling unit identifier
DefinitionDraw site within primary sampling unit
DefinitionThe sample replicate within a draw
DefinitionSampling episode
DefinitionLongitude coordinates of draw site
DefinitionLatitude coordinates of draw site
DefinitionEverglades water management unit
Definitionlandscape sampling unit
Definitionlandscape sampling unit name
DefinitionAverage water depth of 3 measurements representative of replicate
DefinitionpH of water sample upon return to the lab; meters used (followed by years of use) include YSI generic pH/conductivity meter - 2005-2007, Orion model 250A portable meter - 2008, generic pH/conductivity probe - 2009-2014, Accumet AP85 pH/conductivity/TDS/°C/°F meter - 2015-2018, Oakton PC 450 - 2018-2021
DefinitionConductivity of water sample upon return to the lab; meters used (followed by years of use) include YSI generic pH/conductivity meter - 2005-2007, Orion model 250A portable meter - 2008, generic pH/conductivity probe - 2009-2014, Accumet AP85 pH/conductivity/TDS/°C/°F meter - 2015-2018, Oakton PC 450 - 2018-2021
DefinitionDepth of soil up to 100 cm
DefinitionVisual categorization of soil as mostly rock (no soil) (1), marl (2), peat (3), or sand (4)
DefinitionVisual categorization of periphyton as either mostly calcareous (1), mostly organic (3), or a mix of both (2)
DefinitionVolume of periphyton and any attached substrate in perforated graduated cylinder
DefinitionVolume of periphyton with most substrate removed in perforated graduated cylinder
DefinitionVolume of homogenized periphyton removed for sample
DefinitionVisual estimate of the amount of periphyton covering the surface of the wetland
DefinitionPeriphyton sample permits biovolume (mL/m2) calculation
DefinitionPercent of the homogenized sample containing periphyton removed from the bottom of the wetland
DefinitionPercent of the bottom of the wetland covered with periphyton
DefinitionPercent of the homogenized sample containing periphyton removed from plants
DefinitionPercent of plant stems and leaves covered with periphyton
DefinitionCode name of first plant taxon supporting epiphytic periphyton
DefinitionCode name of second plant taxon supporting epiphytic periphyton
DefinitionCode name of third plant taxon supporting epiphytic periphyton
DefinitionPercent of the homogenized sample containing periphyton removed from the water surface
DefinitionPercent of the water surface covered with periphyton
DefinitionCode name of first plant taxon supporting floating periphyton
DefinitionCode name of second plant taxon supporting floating periphyton
DefinitionPercent of the homogenized sample containing filamentous green alge
DefinitionCode name of plant taxon supporting green algae
DefinitionPercent of the homogenized sample containing flocculent detrtital material (floc)
DefinitionConcentration of total phosphorus per dried gram of periphyton
DefinitionPeriphyton dry mass in grams per square meter
DefinitionPeriphyton ash-free dry mass in grams per square meter
DefinitionPeriphyton proportion organic content
DefinitionChlorophyll a of periphyton in micrograms per square meter
DefinitionCORRECTED EDEN DEPTH AFTER APPLYING MEAN OFFSET OF ALL OBSERVED DEPTHS AT SITE
Definition30 DAY MOVING AVERAGE DEPTH
Definition60 DAY MOVING AVERAGE DEPTH
Definition90 DAY MOVING AVERAGE DEPTH
Definition180 DAY MOVING AVERAGE DEPTH
Definition365 DAY MOVING AVERAGE DEPTH
DefinitionDAYS SINCE LAST DRY DOWN <=5cm
DefinitionDURATION OF DRYING EVENT @ 5CM
DefinitionLength in days of current or previous drying event <= 5 cm
DefinitionCumulative sum of HYDROPERIOD5CM + HYDROCOUNT variables within a year
DefinitionNUMBER OF DAYS DEPTH MEASURED >5CM, RESETS EACH YEAR
DefinitionDEPTH OF MARSH 30 DAYS AGO
DefinitionDEPTH OF MARSH 60 DAYS AGO
DefinitionDEPTH OF MARSH 90 DAYS AGO
DefinitionMAX VALUE OF HYDROPERIOD5CM FOR EACH YEAR
DefinitionMEAN HYDROPERIOD LENGTH FOR EACH SITE ACROSS ENTIRE TIME SERIES
Missing Value Code:                      
Code - 9999
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Accuracy Report:                                                                                                                  
Accuracy Assessment:                                                                                                                  
Coverage:                                                                                                                  
Methods:                                                                                                                  

Data Package Usage Rights

All publications based on this dataset must cite the data provider (Evelyn Gaiser, Florida International University), funding sources, the U.S. Army Corps of Engineers (CA#912HZ-11-2-0048) and the South Florida Water Management District (CA#4600001083 and CA#C-C040130).

Keywords

By Thesaurus:
FCE Keyword Listlong-term monitoring
LTER Thesauruswetlands, marshes, algae, biomass, hydrology, microbes, benthos

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

Methods and protocols used in the collection of this data package
Description:

A 120 mL sample of periphyton was collected at each site. Percent aerial cover of periphyton was estimated visually in the field. Ash-free dry mass per area (g/m2), Chlorophyll a (ug/m2), TP (ug/g), % organic content were measured in the laboratory, and water temperature, water depth, conductivity, and pH were measured in a sample brought back from the field. Hydroperiod data come from the Everglades Depth Estimation Network (EDEN; http://sofia.usgs.gov/eden/). Information on mat type, soil type, and plants to which periphytic algae were attached was also gathered from field observations.

Sampling Area and Study Extent
Sampling Description:

Using generalized random-tessellation stratification, we chose a representative set of locations (800 m x 800 m principal sampling units, PSU), within which we sampled three sites in a habitat drawn from a pool of GPS coordinates. At sites where depth was < 1 m, and vegetation not too dense to hamper the formation of periphyton, and our movement in the field, we threw a 1 m3 enclosure, open both at the top and bottom, and collected samples of periphytic algae with a 120 mL plastic beaker from floating or benthic periphyton mats, depending on the depth. Where no mats were present, we took flocculent detritus from the benthos, as this also hosts algae; we then transported the samples back to the laboratory and froze them until analysis. We measured water depth (cm) with a metal ruler, and TP concentrations in the periphyton (μg g−1 dry weight) by means of colorimetry after dry combustion because water column concentrations are often below detection in this extremely oligotrophic wetland [Marazzi, L., E.E. Gaiser, V.J. Jones, F. Tobias, A.W. Mackay. 2017. Algal richness and life-history strategies are influenced by hydrology and phosphorus in two major subtropical wetlands. Freshwater Biology 62: 274-290. DOI: 10.1111/fwb.12866 ].

Sampling Area And Frequency:

Between February 2005 and November 2014, samples were taken in the Everglades ecosystem, from LOX to ENP (NE to SW; see Dataset geographic description).

Sampling Unit Location:
Geographic Region:
Description:Greater Everglades Ecosystem
Bounding Coordinates:
Northern:  27.10Southern:  25.22
Western:  -81.10Eastern:  -80.24
Quality Control
Quality Control Step 1: 
Description:

Data were entered into excel files and then cross-checked and validated by two individuals before migrating into a database.

People and Organizations

Publishers:
Organization:Environmental Data Initiative
Email Address:
info@environmentaldatainitiative.org
Web Address:
https://environmentaldatainitiative.org
Id:https://ror.org/0330j0z60
Creators:
Individual:Dr. Evelyn Gaiser
Organization:Florida Coastal Everglades LTER Program
Position:Principal Investigator
Address:
11200 S.W. 8th Street,
Miami, Florida 33199 USA
Phone:
305-348-6154 (voice)
Phone:
305-348-4096 (fax)
Email Address:
gaisere@fiu.edu
Web Address:
http://algae.fiu.edu
Id:https://orcid.org/0000-0003-2065-4821
Contacts:
Organization:Florida Coastal Everglades LTER Program
Position:Information Manager
Address:
Florida International University,
University Park,
OE 148,
Miami, FL 33199 USA
Phone:
305-348-6054 (voice)
Phone:
305-348-4096 (fax)
Email Address:
fcelter@fiu.edu
Web Address:
http://fcelter.fiu.edu
Organization:Florida Coastal Everglades LTER Program
Position:Information Manager
Address:
Florida International University,
University Park,
OE 148,
Miami, FL 33199 USA
Phone:
305-348-6054 (voice)
Phone:
305-348-4096 (fax)
Email Address:
fcelter@fiu.edu
Web Address:
http://fcelter.fiu.edu
Associated Parties:
Individual: Gabriel Kamener
Organization:Florida International University
Address:
11200 S.W. 8th Street,
Miami, Florida 33199 USA
Phone:
305-348-7286 (voice)
Phone:
305-348-4096 (fax)
Email Address:
gkamener@fiu.edu
Web Address:
algae.fiu.edu
Role:Information Manager - Periphyton Laboratory
Metadata Providers:
Organization:Florida Coastal Everglades LTER Program
Address:
Florida International University,
University Park,
OE 148,
Miami, FL 33199 USA
Phone:
305-348-6054 (voice)
Email Address:
fcelter@fiu.edu
Web Address:
http://fcelter.fiu.edu

Temporal, Geographic and Taxonomic Coverage

Temporal, Geographic and/or Taxonomic information that applies to all data in this dataset:

Time Period
Begin:
2005-09-14
End:
2014-11-14
Geographic Region:
Description:Data were collected in Principal Sampling Units (800m x 800m) in the following regions (see list of sites at row 121). LKO: Lake Okeechobee; LOX: the Arthur R. Marshall Loxahatchee National Wildlife Refuge (Water Conservation Area 1); Pal Mar (PAL); Pennsuco (PEN), Lostman’s Creek (LMC), the ‘Oligohaline’ area (OLG), Southern Marl Prairie (SMP), Shark River Slough (SRS) and Taylor Slough (TSL); Holey Land Wildlife Management Area (HOL), Water Conservation Areas (WCA) 2 and 3.
Bounding Coordinates:
Northern:  27.10Southern:  25.22
Western:  -81.10Eastern:  -80.24

Project

Parent Project Information:

Title:CERP Cooperative Agreement
Personnel:
Individual: Evelyn Gaiser
Organization:Florida Coastal Everglades LTER Program
Address:
Florida International University,
University Park,
OE 148,
Miami, FL 33199 USA
Phone:
305-348-6145 (voice)
Phone:
305-348-4096 (fax)
Email Address:
gaisere@fiu.edu
Role:Lead Principal Investigator
Funding:

U.S. Army Corps of Engineers (CA#912HZ-11-2-0048)

Study Area:
Study Area Coverage:

Time Period
Begin:
20050914
End:
20141114
Additional Award Information:
Funder:Army Corps of Engineers
Number:CA#912HZ-11-2-0048
Title:CERP
URL:https://www.nsf.gov/awardsearch/showAward?AWD_ID=9910514
Related Project:
Title:CERP
Personnel:
Individual: Evelyn Gaiser
Organization:Florida Coastal Everglades LTER Program
Address:
Florida International University,
University Park,
OE 148,
Miami, FL 33199 USA
Phone:
305-348-6145 (voice)
Phone:
305-348-4096 (fax)
Email Address:
gaisere@fiu.edu
Role:Lead Principal Investigator
Funding:

South Florida Water Management District (CA#4600001083 and CA#C-C040130).

Study Area:
Study Area Coverage:

Time Period
Begin:
20050914
End:
20141114
Additional Award Information:
Funder:South Florida Water Management District
Number:CA#4600001083
Title:CERP

Maintenance

Maintenance:
Description:

Data and metadata were updated.

Frequency:
History:
scope:Data and metadata were updated.
old value:First archive of this dataset
change date:2020-04-27
Other Metadata

Additional Metadata

additionalMetadata
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        |     |     |___text '\n      '
        |     |     |___element 'researchType'
        |     |     |     |___text 'Long-term'
        |     |     |___text '\n      '
        |     |     |___element 'addDistribution'
        |     |     |     |___text '\n        '
        |     |     |     |___element 'submissionDate'
        |     |     |     |     |___text '2022-04-27'
        |     |     |     |___text '\n      '
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        |     |___text '\n  '
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EDI is a collaboration between the University of New Mexico and the University of Wisconsin – Madison, Center for Limnology:

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