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Everglades Landscape Model (ELM) Code and Documentation

General Information
Data Package:
Local Identifier:knb-lter-fce.1238.2
Title:Everglades Landscape Model (ELM) Code and Documentation
Alternate Identifier:DOI PLACE HOLDER
Abstract:

The Everglades Landscape Model (ELM) is an application instance of the generalized Ecological Landscape Modeling code package. For applications within the Florida Coastal Everglades (FCE) LTER, the ELM is one of the simulation modeling tools used to a) explore hypotheses of ecosystem processes in heterogenous spatial landscapes, b) extrapolate field-scale research findings across space and time, and c) predict the evolution of the Everglades landscape in response to plausible future scenarios. For ELM v.2.8.3-4, the 2 zip-archive packages here contains 1a) all (C) source code and unix (Bourne) shell scripts used to build and run the ELM (& includes Doxygen-generated hyperlinked source code documentation of every file/function/struct/parameter), 1b) all Everglades-specific input data used in historical (1981-2000) simulations; and 2) a complete documentation report with chapters including the Introduction&Goals, Model Data, Model Structure, Model Performance, and Model User's Guide. The ELM is being applied and updated routinely. Such updated information can be found at http://www.ecolandmod.com .

Publication Date:2022-02-14
For more information:
Visit: DOI PLACE HOLDER

Time Period
Begin:
1980-01-01
End:
2010-12-31

Time Period
Begin:
2010-01-01
End:
2050-12-31

People and Organizations
Contact:FCE LTER Information Manager 
Creator:Fitz, H. Carl (EcoLandMod, Inc.)

Data Entities
Other Name:
ELM2.8reg500_distribution.tar
Description:
ELM v2.8.4 source code, scripts, input data, including Doxygen-generated hyperlinked source code documentation.
Other Name:
README_ELM2.8reg500_distrib
Description:
Readme that is also included in the tar archive, describes basic steps to installing ELM on unix system
Other Name:
ELM_v2.8.4_Documentation
Description:
Complete documentation of ELM v2.8.4, chapters include data, code, performance, user's guide
Detailed Metadata

Data Entities


Non-Categorized Data Resource

Name:ELM2.8reg500_distribution.tar
Entity Type:Unix gzipped tar archive
Description:ELM v2.8.4 source code, scripts, input data, including Doxygen-generated hyperlinked source code documentation.
Physical Structure Description:
Object Name:ELM2.8reg500_distribution.tar.gz
Size:279684779 byte
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Non-Categorized Data Resource

Name:README_ELM2.8reg500_distrib
Entity Type:txt
Description:Readme that is also included in the tar archive, describes basic steps to installing ELM on unix system
Physical Structure Description:
Object Name:README_ELM2.8reg500_distrib.txt
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Non-Categorized Data Resource

Name:ELM_v2.8.4_Documentation
Entity Type:Multi-chapter book
Description:Complete documentation of ELM v2.8.4, chapters include data, code, performance, user's guide
Physical Structure Description:
Object Name:ELM_v2.8.4_Documentation.pdf
Size:43019215 byte
Authentication:68c9086808d0018bb273c60442b1e2bd Calculated By MD5
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Data:https://pasta-s.lternet.edu/package/data/eml/knb-lter-fce/1238/2/9c23f20fc6fcc3db973f38c64ac3be3b

Data Package Usage Rights

This information is released under the Creative Commons license - Attribution - CC BY (https://creativecommons.org/licenses/by/4.0/). The consumer of these data ("Data User" herein) is required to cite it appropriately in any publication that results from its use. The Data User should realize that these data may be actively used by others for ongoing research and that coordination may be necessary to prevent duplicate publication. The Data User is urged to contact the authors of these data if any questions about methodology or results occur. Where appropriate, the Data User is encouraged to consider collaboration or co-authorship with the authors. The Data User should realize that misinterpretation of data may occur if used out of context of the original study. While substantial efforts are made to ensure the accuracy of data and associated documentation, complete accuracy of data sets cannot be guaranteed. All data are made available "as is." The Data User should be aware, however, that data are updated periodically and it is the responsibility of the Data User to check for new versions of the data. The data authors and the repository where these data were obtained shall not be liable for damages resulting from any use or misinterpretation of the data. Thank you.

Keywords

By Thesaurus:
(No thesaurus)FCE LTER, Florida Coastal Everglades LTER, LTER, ecosystem processes, model
LTER Controlled Vocabularylandscape change, hydrology, soil properties, biogeochemical processes, simulation

Methods and Protocols

No methods information available

People and Organizations

Publishers:
Organization:Environmental Data Initiative
Email Address:
info@environmentaldatainitiative.org
Web Address:
https://environmentaldatainitiative.org
Id:https://ror.org/0330j0z60
Creators:
Individual:Dr. H. Carl Fitz
Organization:EcoLandMod, Inc.
Email Address:
carlfitz3@gmail.com
Web Address:
http://www.ecolandmod.com
Id:https://orcid.org/0000-0002-4380-5613
Contacts:
Position:FCE LTER Information Manager
Address:
Institute of Environment,
Florida International University,
Miami, FL 33199

Temporal, Geographic and Taxonomic Coverage

Temporal, Geographic and/or Taxonomic information that applies to all data in this dataset:

Time Period
Begin:
1980-01-01
End:
2010-12-31

Time Period
Begin:
2010-01-01
End:
2050-12-31
Sampling Site: 
Description:SRS1d
Site Coordinates:
Longitude (degree): -80.654Latitude (degree): 25.7463
Sampling Site: 
Description:SRS2
Site Coordinates:
Longitude (degree): -80.78520692Latitude (degree): 25.54972811
Sampling Site: 
Description:SRS3
Site Coordinates:
Longitude (degree): -80.85327617Latitude (degree): 25.46820617
Sampling Site: 
Description:SRS4
Site Coordinates:
Longitude (degree): -80.96431016Latitude (degree): 25.40976421
Sampling Site: 
Description:SRS5
Site Coordinates:
Longitude (degree): -81.03234716Latitude (degree): 25.37702258
Sampling Site: 
Description:SRS6
Site Coordinates:
Longitude (degree): -81.07794623Latitude (degree): 25.36462994
Sampling Site: 
Description:TS/Ph1a
Site Coordinates:
Longitude (degree): -80.59029790000001Latitude (degree): 25.42388762
Sampling Site: 
Description:TS/Ph1b
Site Coordinates:
Longitude (degree): -80.59027402Latitude (degree): 25.43857602
Sampling Site: 
Description:TS/Ph2
Site Coordinates:
Longitude (degree): -80.60690341Latitude (degree): 25.40357188
Sampling Site: 
Description:TS/Ph3
Site Coordinates:
Longitude (degree): -80.66271768Latitude (degree): 25.25240534
Sampling Site: 
Description:TS/Ph6a
Site Coordinates:
Longitude (degree): -80.6490792Latitude (degree): 25.21418102
Sampling Site: 
Description:TS/Ph6b
Site Coordinates:
Longitude (degree): -80.65101654Latitude (degree): 25.21609115
Sampling Site: 
Description:TS/Ph7a
Site Coordinates:
Longitude (degree): -80.63910514Latitude (degree): 25.19080491
Sampling Site: 
Description:TS/Ph7b
Site Coordinates:
Longitude (degree): -80.64207766Latitude (degree): 25.19676203
Sampling Site: 
Description:TS/Ph8
Site Coordinates:
Longitude (degree): -80.52455665Latitude (degree): 25.23269749
Sampling Site: 
Description:TS/Ph9
Site Coordinates:
Longitude (degree): -80.48978207Latitude (degree): 25.17692874

Project

Parent Project Information:

Title:LTER: Coastal Oligotrophic Ecosystem Research
Personnel:
Individual: James Fourqurean
Role:PI
Individual: John Kominoski
Address:
11200 S.W. 8th Street,
Florida International University,
Miami, FL 33199 US
Email Address:
jkominos@fiu.edu
Id:https://orcid.org/0000-0002-0978-3326
Role:Lead Principal Investigator
Individual: Evelyn Gaiser
Role:PI
Individual: Jennifer Rehage
Role:PI
Individual: Kevin Grove
Role:PI
Abstract:

Coastal ecosystems like the Florida Everglades provide many benefits and services to society including protection from storms, habitat and food for important fisheries, support of tourism and local economies, filtration of fresh water, and burial and storage of carbon that offsets greenhouse gas emissions. The Florida Coastal Everglades Long Term Ecological Research (FCE LTER) program addresses how and why coastal ecosystems and their services are changing. Like many coastal ecosystems, the Florida Everglades has been threatened by diversion of fresh water to support urban and agricultural expansion. At the same time, sea-level rise has caused saltwater intrusion of coastal ecosystems which stresses freshwater species, causes elevation loss, and contaminates municipal water resources. However, restoration of seasonal pulses of fresh water may counteract these threats. Researchers in the FCE LTER are continuing long-term studies and experiments to understand how changes in freshwater supply, sea-level rise, and disturbances like tropical storms interact to influence ecosystems and their services. The science team is guided by a diversity and inclusion plan to attract diverse scientists at all career stages. The team includes resource managers – who use discoveries and knowledge from the FCE LTER to guide effective freshwater restoration – and an active community of academic and agency scientists, teachers and other educators, graduate, undergraduate, and high school students. The project has a robust education and outreach program that engages the research team with the general public to advance science discoveries and protection of coastal ecosystems.

Additional Award Information:
Funder:National Science Foundation
Funder ID:https://ror.org/021nxhr62
Number:2025954
Title:LTER: Coastal Oligotrophic Ecosystem Research
URL:https://www.nsf.gov/awardsearch/showAward?AWD_ID=2025954&HistoricalAwards=false
Related Project:
Title:Florida Coastal Everglades LTER: Coastal Oligotrophic Ecosystems Research-the Coastal Everglades
Personnel:
Individual: Daniel Childers
Role:Lead Principal Investigator
Abstract:

We are investigating how variability in regional climate, freshwater inputs, disturbance, and perturbations affect the coastal Everglades ecosystem. Our long term research program focuses on testing the following central idea and hypotheses: Regional processes mediated by water flow control population and ecosystem level dynamics at any location within the coastal Everglades landscape. This phenomenon is best exemplified in the dynamics of an estuarine oligohaline zone where fresh water draining phosphorus-limited Everglades marshes mixes with water from the more nitrogen-limited coastal ocean. Hypothesis 1: In nutrient-poor coastal systems, long-term changes in the quantity or quality of organic matter inputs will exert strong and direct controls on estuarine productivity, because inorganic nutrients are at such low levels. Hypothesis 2: Interannual and long-term changes in freshwater flow controls the magnitude of nutrients and organic matter inputs to the estuarine zone, while ecological processes in the freshwater marsh and coastal ocean control the quality and characteristics of those inputs. Hypothesis 3: Long-term changes in freshwater flow (primarily manifest through management and Everglades restoration) will interact with long-term changes in the climatic and disturbance (sea level rise, hurricanes, fires) regimes to modify ecological pattern and process across coastal landscapes.

Additional Award Information:
Funder:National Science Foundation
Funder ID:https://ror.org/021nxhr62
Number:9910514
Title:Florida Coastal Everglades LTER: Coastal Oligotrophic Ecosystems Research-the Coastal Everglades
URL:https://www.nsf.gov/awardsearch/showAward?AWD_ID=9910514
Related Project:
Title:FCE LTER II: Coastal Oligotrophic Ecosystems Research
Personnel:
Individual: Evelyn Gaiser
Id:https://orcid.org/0000-0003-2065-4821
Role:Lead Principal Investigator
Abstract:

Our FCE I research focused on understanding how dissolved organic matter from upstream oligotrophic marshes interacts with a marine source of phosphorus (P), the limiting nutrient, to control estuarine productivity where these two influences meet-in the oligohaline ecotone. This dynamic is affected by the interaction of local ecological processes and landscape-scale drivers (hydrologic, climatological, and human). During FCE I, our ideas about how these "upside-down" estuaries (Childers et al. 2006) function has evolved, and we have modified our central theme to reflect this new understanding. Our focus in FCE II will be even more strongly on the oligohaline ecotone region of our experimental transects. For FCE II, our overarching theme is: In the coastal Everglades landscape, population and ecosystem-level dynamics are controlled by the relative importance of water source, water residence time, and local biotic processes. This phenomenon is best exemplified in the oligohaline ecotone, where these 3 factors interact most strongly and vary over many [temporal and spatial] scales.Hypothesis 1: Increasing inputs of fresh water will enhance oligotrophy in nutrient-poor coastal systems, as long as the inflowing water has low nutrient content; this dynamic will be most pronounced in the oligohaline ecotone. Hypothesis 2: An increase in freshwater inflow will increase the physical transport of detrital organic matter to the oligohaline ecotone, which will enhance estuarine productivity. The quality of these allochthonous detrital inputs will be controlled by upstream ecological processes. Hypothesis 3: Water residence time, groundwater inputs, and tidal energy interact with climatic and disturbance regimes to modify ecological pattern and process in oligotrophic estuaries; this dynamic will be most pronounced in the oligohaline ecotone. Childers, D.L., J.N. Boyer, S.E. Davis, C.J. Madden, D.T. Rudnick, and F.H. Sklar, 2006. Relating precipitation and water management to nutrient concentration patterns in the oligotrophic "upside down" estuaries of the Florida Everglades. Limnology and Oceanography, 51(1): 602-616.

Additional Award Information:
Funder:National Science Foundation
Funder ID:https://ror.org/021nxhr62
Number:620409
Title:FCE LTER II: Coastal Oligotrophic Ecosystems Research
URL:https://www.nsf.gov/awardsearch/showAward?AWD_ID=0620409
Related Project:
Title:FCE LTER III: Coastal Oligotrophic Ecosystems Research
Personnel:
Individual: Evelyn Gaiser
Id:https://orcid.org/0000-0003-2065-4821
Role:Lead Principal Investigator
Abstract:

Coastal ecosystems are being modified at unprecedented rates through interacting

pressures of global climate change and rapid human population growth, impacting natural coastal

resources and the services they provide. Located at the base of the shallow-sloping Florida peninsula, the Everglades wilderness and 6 million human residents are exceptionally exposed to both pressures. Further, freshwater drainage has accelerated saltwater intrusion over land and into the porous limestone aquifer, resulting in coastal ecosystem transgression and seasonal residential freshwater shortages. The unprecedented landscape-scale Everglades restoration process is expected to reverse some of these trends. However, it is not clear how uncertainties about climate change prognoses and their impacts (e.g., sea level rise (SLR), changes in storm activity or severity, and climate drivers of freshwater availability) may influence human activities (e.g., population growth, resource use, land-use change), and how their interaction will affect the restoration process that is already steeped in conflict. The Florida Coastal Everglades Long-Term Ecological Research (FCE LTER) program is dedicated to long-term coupled biophysical and cultural studies that expose and unravel complex feedbacks that generate distinctive patterns and processes in vulnerable coastal ecosystems. The overarching theme of FCE research is: In the coastal Everglades, climate change and resource management decisions interact to influence

freshwater availability, ecosystem dynamics, and the value and utilization of ecosystem services by people. Because they are highly sensitive to the balance of freshwater and marine influences,

coastal wetlands of the Florida Everglades provide an ideal system to examine how socio-ecological systems respond to and mitigate the effects of climate change and freshwater allocation decisions. The trans-disciplinary science conducted by the large FCE research team is revealing how estuary hydrodynamics and biogeochemistry may tilt on a fulcrum defined by the magnitude by which coastal pressures (SRL, storms) are mitigated by freshwater flows. We employ a socio-ecological framework to address how climate change interacts with political decisions to determine the sustainability of interconnected human-natural systems. In FCE I, we discovered how coastal nutrient supplies create an unusual “upside-down” productivity gradient in karstic estuaries. FCE II research used growing long-term datasets to reveal the sensitivity of this gradient to changes in hydrodynamics, nutrient availability, and salinity. In FCE III, we will use South Florida as an exemplary system for understanding how and why socio-ecological systems resist, adapt to, or mitigate the effects of climate change on ecosystem sustainability. We will examine how decisions about freshwater delivery to the Everglades influence -and are influenced by - the impact of SLR in this especially vulnerable landscape. Biophysical studies will focus on how this balance of fresh and marine sources influences biogeochemical cycling, primary production, organic matter dynamics, and trophic dynamics, to drive carbon gains and losses. We expand our spatio-temporal domain by employing powerful long-term datasets and experiments to determine legacies of past interactions, and to constrain models that will help guide a sustainable future for the FCE.

Additional Award Information:
Funder:National Science Foundation
Funder ID:https://ror.org/021nxhr62
Number:1237517
Title:FCE LTER III: Coastal Oligotrophic Ecosystems Research
URL:https://www.nsf.gov/awardsearch/showAward?AWD_ID=1237517
Related Project:
Title:FCE LTER IV: Drivers of Abrupt Change in the Florida Coastal Everglades
Personnel:
Individual: Evelyn Gaiser
Role:Lead Principal Investigator
Abstract:

Coastal ecosystems like the Florida Everglades provide many benefits to society. They protect coastlines from storms and store carbon. They provide habitat and food for important fisheries. They also support tourism and local economies, and store freshwater for millions of people. The Florida Coastal Everglades Long Term Ecological Research (FCE LTER) program addresses how and why coastal ecosystems are changing in response to sea level rise and the actions of people. Like many coastal ecosystems, the Florida Everglades are threatened by the diversion of freshwater to support urban and agricultural expansion. At the same time, sea level rise has caused coastal ecosystems to become saltier, threatening the freshwater supply, stressing freshwater plants, and causing the soils to collapse. When the soils beneath coastal wetlands disappear, seawater invades even more quickly. Researchers in the FCE LTER are continuing long-term studies and experiments to understand how these changes influence ecosystem functions and services. They are also developing tools for resource managers to create an effective freshwater restoration program. The science team includes an active community of graduate students. As a group, they reach the public through education and outreach activities, and regularly advise policy-makers on resource management decisions. The FCE LTER research program addresses how changing fresh and marine supplies of water influence coastal ecosystem dynamics through: (i) continued long-term assessment of changes in biogeochemistry, primary production, organic matter, and trophic dynamics in ecosystems along freshwater-to-marine gradients, (ii) maintenance of existing in situ and ex situ long-term experiments, (iii) use of high-resolution remote sensing, coupled with models to forecast landscape-scale changes, (iv) addition of synoptic satellite sites to capture discrete spatio-temporal responses to episodic disturbance, and (v) initiation of new experimental manipulations to determine drivers and mechanisms of resilience to saltwater intrusion. Data syntheses integrate month-to-annual and inter-annual data into models of water, nutrients, carbon, and species dynamics throughout the Everglades landscape to compare how ecosystems with different productivities and carbon stores respond (maintain, increase, or decline) to short- (pulses) and long-term changes (presses) in hydrologic connectivity. Understanding and predicting the drivers of abrupt changes in ecosystems is a key challenge in ecosystem ecology.

Additional Award Information:
Funder:National Science Foundation
Funder ID:https://ror.org/021nxhr62
Number:1832229
Title:LTER: Drivers of Abrupt Change in the Florida Coastal Everglades
URL:https://www.nsf.gov/awardsearch/showAward?AWD_ID=1832229&HistoricalAwards=false

Maintenance

Maintenance:
Description:

This data package was submitted by Karl Fitz on 2/14/2022. No updates are expected.

Frequency:
Other Metadata

Additional Metadata

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