Data Package Metadata   View Summary

SOM density fractions beneath trees of different mycorrhizal types in New England forests

General Information
Data Package:
Local Identifier:knb-lter-hbr.314.10
Title:SOM density fractions beneath trees of different mycorrhizal types in New England forests
Alternate Identifier:DOI PLACE HOLDER
Abstract:

Recent work suggests mycorrhizal fungi are important drivers of soil organic matter dynamics; however, whether this is a result of the fungi themselves or related traits of their host trees remains unclear. We evaluated how tree mycorrhizal associations and foliar chemistry influence mineral-associated organic matter (MAOM) and particulate organic matter (POM) in temperate forests of northern New England, USA. We measured carbon (C) and nitrogen (N) concentrations and C:N of three soil density fractions beneath six tree species that vary in both mycorrhizal association and foliar chemistry. We found a significant decline in the concentration of MAOM C and N with increasing foliar C:N in soil beneath tree species with arbuscular mycorrhizal (AM), but not ectomycorrhizal (ECM) fungi. The C:N of POM and MAOM was positively associated with the foliar C:N of the dominant tree species in a forest, and MAOM C:N was also higher beneath ECM- rather than AM-associated tree species. These results add to the growing body of support for mycorrhizal fungi as predictors of soil C and N dynamics, and suggest that C concentration in the MAOM fraction is more sensitive to organic matter chemistry beneath AM-associated tree species. Because MAOM decomposition is thought to be less responsive than POM decomposition to changes in soil temperature and moisture, differences in the tendency of AM- vs. ECM-dominated forests to support MAOM formation and persistence may lead to systematic differences in the response of these forest types to ongoing climate change.

These data were gathered as part of the Hubbard Brook Ecosystem Study (HBES). The HBES is a collaborative effort at the Hubbard Brook Experimental Forest, which is operated and maintained by the USDA Forest Service, Northern Research Station.

Publication Date:2021-06-24

Time Period
Begin:
2017-06-01
End:
2019-06-30

People and Organizations
Contact:Hubbard Brook Ecosystem Study [  email ]
Creator:Lang, Ashley K (Indiana University)
Creator:Fitch, Amelia A (Dartmouth College)
Creator:Ayres, Matthew P (Dartmouth College)
Creator:Jevon, Fiona V (Yale University)
Creator:Hatala Matthes, Jaclyn (Wellesley College)

Data Entities
Data Table Name:
myc.maom.data
Description:
Carbon and nitrogen content of three soil density fractions beneath trees associated with either arbuscular or ectomycorrhizal fungi
Data Table Name:
plotData
Description:
Locations of sampling plots and tree basal areas
Data Table Name:
grain.size
Description:
Soil grain sizes
Detailed Metadata

Data Entities


Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/knb-lter-hbr/314/10/52a6d817a39700ef028a87af2151c7a5
Name:myc.maom.data
Description:Carbon and nitrogen content of three soil density fractions beneath trees associated with either arbuscular or ectomycorrhizal fungi
Number of Records:60
Number of Columns:20

Table Structure
Object Name:mycMaomData.csv
Size:6236 bytes
Authentication:653164de21cc927288429b99cd14e6c9 Calculated By MD5
Text Format:
Number of Header Lines:1
Record Delimiter:\r\n
Orientation:column
Simple Delimited:
Field Delimiter:,
Quote Character:"

Table Column Descriptions
 
Column Name:uid  
Site  
Species  
Rep  
Myc  
O.horizon.depth  
FLF.g  
OLF.g  
HF.g  
FLF.pct.C  
OLF.pct.C  
HF.pct.C  
FLF.pct.N  
OLF.pct.N  
HF.pct.N  
Sample.mass  
min.pct.C  
min.pct.N  
org.pct.C  
org.pct.N  
Definition:unique ID for soil sampleName of field site where sample was collectedSpecies of dominant tree in soil sampling plotReplicate plot number for each species within each siteMycorrhizal association of dominant tree in soil sampling plotDepth of orghanic soil horizon including Oi/Oe/Oa horizonsMass of free light fraction after density fractionation of soil sampleMass of occluded light fraction after density fractionation of soil sampleMass of heavy soil fraction after density fractionation of soil samplePercent carbon of material in the free light fractionPercent carbon of material in the occluded light fractionPercent carbon of material in the heavy soil fractionPercent nitrogen of material in the free light fractionPercent nitrogen of material in the occluded light fractionPercent nitrogen of material in the heavy soil fractionMass of mineral horizon soil sample used for density fractionationBulk mineral horizon soil carbon percentageBulk mineral horizon soil nitrogen percentageBulk organic horizon soil carbon percentageBulk organic horizon soil nitrogen percentage
Storage Type:string  
string  
string  
string  
string  
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float  
float  
float  
float  
float  
float  
float  
float  
float  
float  
float  
float  
Measurement Type:nominalnominalnominalnominalnominalratioratioratioratioratioratioratioratioratioratioratioratioratioratioratio
Measurement Values Domain:
Definitionunique ID for soil sample
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeAB
DefinitionAvery Brook, Norwich VT
Source
Code Definition
CodeCB
DefinitionClement Brook Trail, Corinth, VT
Source
Code Definition
CodeHB
DefinitionHubbard Brook Experimental Forest, Woodstock, NH
Source
Code Definition
CodeLP
DefinitionLong Pond Natural Area, Greensboro, VT
Source
Code Definition
CodeMK
DefinitionMount Moosilauke, Benton, NH
Source
Code Definition
CodeMS
DefinitionMoose Mountain, Hanover, NH
Source
Code Definition
CodeRM
DefinitionRoy Mountain Wildlife Management Area, Barnet VT
Source
Code Definition
CodeRR
DefinitionRoaring Ridge Trail, Corinth, VT
Source
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeACSA3
DefinitionAcer saccharum
Source
Code Definition
CodeBEAL2
DefinitionBetula alleghaniensis
Source
Code Definition
CodeFAGR
DefinitionFagus grandifolia
Source
Code Definition
CodeFRAM2
DefinitionFraxinus americana
Source
Code Definition
CodeTHOC2
DefinitionThuja occidentalis
Source
Code Definition
CodeTSCA
DefinitionTsuga canadensis
Source
DefinitionReplicate plot number for each species within each site
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeAM
DefinitionArbuscular mycorrhizal fungi
Source
Code Definition
CodeECM
DefinitionEctomycorrhizal fungi
Source
Unitcentimeter
Typereal
Min
Max32 
Unitgram
Typereal
Min0.02 
Max0.97 
Unitgram
Typereal
Min0.01 
Max3.73 
Unitgram
Typereal
Min15.93 
Max20.15 
Unitpercent
Typereal
Min19.47 
Max42.95 
Unitpercent
Typereal
Min32.01 
Max45.26 
Unitpercent
Typereal
Min1.18 
Max7.83 
Unitpercent
Typereal
Min0.46 
Max1.561282559 
Unitpercent
Typereal
Min0.87 
Max2.47 
Unitpercent
Typereal
Min0.05 
Max0.45 
Unitgram
Typereal
Min20 
Max20.64 
Unitpercent
Typereal
Min1.74 
Max13.48 
Unitpercent
Typereal
Min0.11 
Max0.68 
Unitpercent
Typereal
Min6.2 
Max47.86 
Unitpercent
Typereal
Min0.37 
Max2.64 
Missing Value Code:          
CodeNA
ExplData not available
CodeNA
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CodeNA
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CodeNA
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CodeNA
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CodeNA
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Accuracy Report:                                        
Accuracy Assessment:                                        
Coverage:                                        
Methods:                                        

Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/knb-lter-hbr/314/10/674fe428d0b6ea76e5c0753262e90c14
Name:plotData
Description:Locations of sampling plots and tree basal areas
Number of Records:492
Number of Columns:11

Table Structure
Object Name:plotData.csv
Size:33362 bytes
Authentication:a32d48328fa7e82c14dd0372b64b99b8 Calculated By MD5
Text Format:
Number of Header Lines:1
Record Delimiter:\r\n
Orientation:column
Simple Delimited:
Field Delimiter:,
Quote Character:"

Table Column Descriptions
 
Column Name:Site  
State  
Target.species  
Rep  
Date.sampled  
Latitude  
Longitude  
Species  
DBH  
Notes  
BA  
Definition:Field site where soil sample was collectedState where soil sample was collectedDominant tree species for plot species classificationReplicate soil sampling plots within species and siteDate soil sample was collectedLatitude of soil collection plotLongitude of soil collection plotSpecies of tree inside plot boundaryDiameter at breast height of tree inside plotStatus of tree being measuredBasal area of individual tree
Storage Type:string  
string  
string  
string  
date  
float  
float  
string  
float  
string  
float  
Measurement Type:nominalnominalnominalnominaldateTimeratiorationominalrationominalratio
Measurement Values Domain:
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeAB
DefinitionAvery Brook, Norwich VT
Source
Code Definition
CodeCB
DefinitionClement Brook Trail, Corinth, VT
Source
Code Definition
CodeHB
DefinitionHubbard Brook Experimental Forest, Woodstock, NH
Source
Code Definition
CodeLP
DefinitionLong Pond Natural Area, Greensboro, VT
Source
Code Definition
CodeMK
DefinitionMount Moosilauke, Benton, NH
Source
Code Definition
CodeMS
DefinitionMoose Mountain, Hanover, NH
Source
Code Definition
CodeRM
DefinitionRoy Mountain Wildlife Management Area, Barnet VT
Source
Code Definition
CodeRR
DefinitionRoaring Ridge Trail, Corinth, VT
Source
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeVT
DefinitionVermont
Source
Code Definition
CodeNH
DefinitionNew Hampshire
Source
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeACSA3
DefinitionAcer saccharum
Source
Code Definition
CodeBEAL2
DefinitionBetula alleghaniensis
Source
Code Definition
CodeFAGR
DefinitionFagus grandifolia
Source
Code Definition
CodeFRAM2
DefinitionFraxinus americana
Source
Code Definition
CodeTHOC2
DefinitionThuja occidentalis
Source
Code Definition
CodeTSCA
DefinitionTsuga canadensis
Source
DefinitionReplicate soil sampling plots within species and site
FormatYYYY-MM-DD
Precision
Unitdegree
Typereal
Min43.718293 
Max44.621119 
Unitdegree
Typereal
Min-72.32 
Max-71.70083333 
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeACSA
DefinitionAcer saccharum
Source
Code Definition
CodeBEAL
DefinitionBetula alleghaniensis
Source
Code Definition
CodeFAGR
DefinitionFagus grandifolia
Source
Code Definition
CodeFRAM
DefinitionFraxinus americana
Source
Code Definition
CodeTHOC
DefinitionThuja occidentalis
Source
Code Definition
CodeTSCA
DefinitionTsuga canadensis
Source
Code Definition
CodeACRU
DefinitionAcer rubrum
Source
Code Definition
CodeBEPA
DefinitionBetula papyrifera
Source
Code Definition
CodePIRU
DefinitionPicea rubens
Source
Code Definition
CodeABBA
DefinitionAbies balsamea
Source
Code Definition
CodeUNK
DefinitionUnknown
Source
Code Definition
CodeACPE
DefinitionAcer pensylvanicum
Source
Code Definition
CodeTIAM
DefinitionTilia americana
Source
Code Definition
CodeOSVI
DefinitionOstrya virginiana
Source
Unitcentimeter
Typereal
Min2.5 
Max70.3 
DefinitionStatus of tree being measured
UnitmeterSquaredPerPlot
Typereal
Min
Max0.388151749 
Missing Value Code:          
CodeNA
Expldata not available
CodeNA
Expldata not available
 
CodeNA
Expldata not available
 
CodeNA
Expldata not available
Accuracy Report:                      
Accuracy Assessment:                      
Coverage:                      
Methods:                      

Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/knb-lter-hbr/314/10/e09864cb95e4562f2e72ac786514fe20
Name:grain.size
Description:Soil grain sizes
Number of Records:31
Number of Columns:4

Table Structure
Object Name:grainSize.csv
Size:1468 bytes
Authentication:bb22e502717162005de4fcae9c096bda Calculated By MD5
Text Format:
Number of Header Lines:1
Record Delimiter:\r\n
Orientation:column
Simple Delimited:
Field Delimiter:,
Quote Character:"

Table Column Descriptions
 
Column Name:Sample.ID  
clay  
silt  
sand  
Definition:Unique identifier of soil samplepercentage of soil particles in clay size classificationpercentage of soil particles in silt size classificationpercentage of soil particles in sand size classification
Storage Type:string  
float  
float  
float  
Measurement Type:nominalratioratioratio
Measurement Values Domain:
DefinitionUnique identifier of soil sample
Unitpercent
Typereal
Min5.159843514 
Max22.897522 
Unitpercent
Typereal
Min12.20320923 
Max40.41762784 
Unitpercent
Typereal
Min40.75769811 
Max79.60735195 
Missing Value Code:        
Accuracy Report:        
Accuracy Assessment:        
Coverage:        
Methods:        

Data Package Usage Rights

This information is released under the Creative Commons license - Attribution - CC BY (https://creativecommons.org/licenses/by/4.0/). The consumer of these data ("Data User" herein) is required to cite it appropriately in any publication that results from its use. The Data User should realize that these data may be actively used by others for ongoing research and that coordination may be necessary to prevent duplicate publication. The Data User is urged to contact the authors of these data if any questions about methodology or results occur. Where appropriate, the Data User is encouraged to consider collaboration or co-authorship with the authors. The Data User should realize that misinterpretation of data may occur if used out of context of the original study. While substantial efforts are made to ensure the accuracy of data and associated documentation, complete accuracy of data sets cannot be guaranteed. All data are made available "as is." The Data User should be aware, however, that data are updated periodically and it is the responsibility of the Data User to check for new versions of the data. The data authors and the repository where these data were obtained shall not be liable for damages resulting from any use or misinterpretation of the data. Thank you.

Keywords

By Thesaurus:
LTER Controlled Vocabularybiogeochemistry, soil properties, soil organic matter, ecosystems, forests, ecosystem ecology
LTER Core Research Areamycorrhizae, Movement of Organic Matter
HBES VocabularyHBR, Hubbard Brook LTER, Hubbard Brook Experimental Forest, Hubbard Brook Ecosystem Study, HBES, HBEF, New Hampshire, NH, White Mountain National Forest
ISO 19115 Topic CategorygeoscientificInformation, biota
National Research & Development TaxonomyClimate change, Climate change effects, Ecology, Ecosystems, & Environment

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

Methods and protocols used in the collection of this data package
Description:

Site selection

We established 60 plots distributed across eight distinct forest sites in northern New Hampshire and Vermont, USA (Figure 1). Plots were 10 m in diameter (78.54 m2 ) and each plot was dominated (> 50% basal area) by one of six AM- or ECM-associated tree species: AM species included white ash (Fraxinus americana L.), sugar maple (Acer saccharum Marsh.), and northern white cedar (Thuja occidentalis L.), and the ECM-associated tree species included yellow birch (Betula alleghaniensis Britton), American beech (Fagus grandifolia Ehrh.), and eastern hemlock (Tsuga canadensis L. Carrière). Though a plot was considered dominated by each target species when the proportion of that species’ basal area exceeded 50% of the total basal area, the target species comprised more than 90% of the total basal area in 57% of plots. 

Because tree species tend to grow in particular soil types that may vary in the properties that affect MAOM formation, we sampled multiple species within close geographical range at most sites and ensured that each species was sampled at multiple sites to capture the range of soil conditions wherein each species can be found. Further, we took care to identify sites with little or no documented human disturbance in the last fifty years (i.e. conservation areas, experimental forest, and privately-owned land with known history) to minimize differences in soil properties based on past land use.

Soil collection

All soil was sampled during the snow-free seasons in 2017, 2018, or 2019. At the time of establishment, we collected one soil sample from the organic horizon and one from the uppermost mineral horizon at the center of each plot. Organic (O) horizon soil was collected from the top of the O horizon, immediately below the loose leaf litter. Mineral soil was collected from the upper 10 cm of mineral soil except when an E horizon was present. In such cases, we collected soil from the 10 cm immediately below the E horizon. Samples were sieved to remove rocks and roots > 2 mm in diameter and placed in a freezer at  -80 ℃ within a week of collection. Samples were stored for 6 months to 1 year, until sequential density fractionation.

Sequential Density Fractionation

Each mineral soil sample was separated into three distinct fractions based on density and occlusion: the “free” light fraction (hereafter fPOM) and the occluded light fraction (oPOM), with densities < 1.7 g/mL, and the remaining heavy fraction, which included mineral-associated organic matter (MAOM) with a density > 1.7 g/mL. These operationally-defined soil fractions can be used to distinguish soil organic matter that is relatively accessible to microbial decomposers (fPOM), from that which is isolated by physical barriers like soil aggregates (oPOM), and bound to dense soil minerals (MAOM; <ulink url="https://paperpile.com/c/IRXefK/i42t">Sollins et al. 2006)</ulink>. 

First, samples of mineral soil from each site were dried at 60 ℃ until they reached a constant mass. Approximately 20 g of each dry sample was then placed in a 175-mL centrifuge tube and submerged in a solution of sodium polytungstate (SPT) with a density of 1.7 g/mL, which was determined to be ideal for isolating mineral particles from organic matter in forest soils from our study region (Hicks Pries, unpublished data). The fPOM was isolated by aspirating all floating material after initial submersion in SPT followed by one hour of centrifugation at 3600 rpm. To disrupt aggregates and release physically occluded organic material, we then placed each centrifuge tube on a shaker table for 5 minutes and subjected the soil solution to two minutes of sonication at 20 kHz with a benchtop sonifier (Branson Ultrasonics, Danbury, CT, USA). The floating material (oPOM) was then aspirated, leaving only the densest fraction containing minerals and their associated organic matter. Aspirated materials in the light fractions were isolated by vacuum filtration and rinsed three times with ultrapure water to wash away residual SPT. The remaining dense material was rinsed to remove all SPT by agitating the material in ultra-pure water followed by centrifugation at 3500 rpm for 20 minutes. The supernatant was then discarded, and this process was repeated for a total of three rinses. All three soil fractions were then oven-dried at 60 ℃. All fractionated mineral soil samples and bulk samples of soil from both the mineral and organic horizons were analyzed for total C and N concentrations by mass (Carlo-Erba Instruments, Wigan, UK). 

Soil texture analysis

To characterize underlying soil properties that influence MAOM formation, we measured soil sand, silt, and clay content from a subset of  3 mineral horizon samples at each site using the hydrometer method. Briefly, we calculated the percentage of soil mass as clay (particles < 2 µm), silt (2.0 – 50 µm), and sand (50 - 2000 µm) after suspending a homogenized sample of each soil in a 5% sodium hexametaphosphate solution and recording the solution density at specified time intervals <ulink url="https://paperpile.com/c/IRXefK/n87r">(Ashworth et al. 2001)</ulink>.

Ashworth J, Keyes D, Kirk R, Lessard R (2001) Standard procedure in the hydrometer method for particle size analysis. Commun Soil Sci Plant Anal 32:633–642

Sollins P, Swanston C, Kleber M, et al (2006) Organic C and N stabilization in a forest soil: Evidence from sequential density fractionation. Soil Biol Biochem 38:3313–3324

People and Organizations

Publishers:
Organization:Environmental Data Initiative
Email Address:
info@environmentaldatainitiative.org
Web Address:
https://environmentaldatainitiative.org
Creators:
Individual: Ashley K Lang
Organization:Indiana University
Email Address:
al40@iu.edu
Id:https://orcid.org/0000-0002-6080-1681
Individual: Amelia A Fitch
Organization:Dartmouth College
Email Address:
Amelia.A.Fitch.GR@dartmouth.edu
Id:https://orcid.org/0000-0003-1757-2219
Individual: Matthew P Ayres
Organization:Dartmouth College
Email Address:
Matthew.P.Ayres@dartmouth.edu
Id:https://orcid.org/0000-0002-9239-3870
Individual: Fiona V Jevon
Organization:Yale University
Email Address:
fionajevon@gmail.com
Id:https://orcid.org/0000-0002-3586-7566
Individual: Jaclyn Hatala Matthes
Organization:Wellesley College
Email Address:
jmatthes@wellesley.edu
Id:https://orcid.org/0000-0001-8999-8062
Contacts:
Organization:Hubbard Brook Ecosystem Study
Email Address:
hbr-im@lternet.edu

Temporal, Geographic and Taxonomic Coverage

Temporal, Geographic and/or Taxonomic information that applies to all data in this dataset:

Time Period
Begin:
2017-06-01
End:
2019-06-30
Geographic Region:
Description:Hubbard Brook Experimental Forest
Bounding Coordinates:
Northern:  43.959Southern:  43.914
Western:  -71.8062Eastern:  -71.7022
Geographic Region:
Description:Roaring Ridge Trail, Corinth VT
Bounding Coordinates:
Northern:  44.080278Southern:  44.075833
Western:  -72.32Eastern:  -72.308889
Sampling Site: 
Description:Long Pond Natural Area, Greensboro, VT
Site Coordinates:
Longitude (degree): -72.264148Latitude (degree): 44.621119
Geographic Region:
Description:Mt. Moosilauke, Benton, NH
Bounding Coordinates:
Northern:  44.026389Southern:  44.000278
Western:  -72.152222Eastern:  -71.866111
Geographic Region:
Description:Moose Mountain, Hanover, NH
Bounding Coordinates:
Northern:  43.72276Southern:  43.718293
Western:  -72.17047Eastern:  -72.145193
Geographic Region:
Description:Avery Brook, Norwich, VT
Bounding Coordinates:
Northern:  43.784167Southern:  43.782222
Western:  -72.289722Eastern:  -72.285
Geographic Region:
Description:Clement Brook Trail, Corinth, VT
Bounding Coordinates:
Northern:  44.0497222222222Southern:  44.0483333333333
Western:  -72.3169444444444Eastern:  -72.3125
Geographic Region:
Description:Roy Mountain Wildlife Management Area, Barnet, VT
Bounding Coordinates:
Northern:  44.276667Southern:  44.274444
Western:  -72.134167Eastern:  -72.1341667

Project

Parent Project Information:

Title:LTER: Long Term Ecological Research at the Hubbard Brook Experimental Forest (2016)
Personnel:
Individual: Gary Lovett
Organization:Cary Institute of Ecosystem Studies
Email Address:
lovettg@caryinstitute.org
Id:https://orcid.org/0000-0002-8411-8027
Role:Principal Investigator
Funding: National Science Foundation (NSF) 1637685
Related Project:
Title:Long-Term Ecological Research at the Hubbard Brook Experimental Forest (2016)
Personnel:
Individual: Gary Lovett
Organization:Cary Institute of Ecosystem Studies
Email Address:
lovettg@caryinstitute.org
Id:https://orcid.org/0000-0002-8411-8027
Role:Principal Investigator
Funding: National Science Foundation (NSF) 1633026
Related Project:
Title:The role of mycorrhizal fungi in mineral-associated organic matter formation in northern forests
Personnel:
Individual: Ashley K Lang
Organization:Indiana University
Email Address:
al40@iu.edu
Id:https://orcid.org/0000-0002-6080-1681
Role:Principal Investigator
Funding: Dartmouth College Alumni Research Award NA
Related Project:
Title:The role of mycorrhizal fungi in mineral-associated organic matter formation in northern forests
Personnel:
Individual: Caitlin E Hicks Pries
Organization:Dartmouth College
Email Address:
Caitlin.Hicks.Pries@dartmouth.edu
Id:https://orcid.org/0000-0003-0813-2211
Role:Principal Investigator
Funding: Terrestrial Ecosystem Science Program- U.S. Department of Energy DE-SC0020228

Maintenance

Maintenance:
Description:complete
Frequency:
Other Metadata

Additional Metadata

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