Data Package Metadata   View Summary

Hubbard Brook Experimental Forest: 2019 and 2022 Stream Bryophyte Abundance

General Information
Data Package:
Local Identifier:knb-lter-hbr.400.1
Title:Hubbard Brook Experimental Forest: 2019 and 2022 Stream Bryophyte Abundance
Alternate Identifier:DOI PLACE HOLDER
Abstract:

Stream bryophytes (mosses and liverworts) are widely recognized as important macroinvertebrate habitats, but their overall role in the stream ecosystem, particularly in nutrient cycling, remains understudied. Hubbard Brook Experimental Forest contains some of the most extensively researched streams in the world, yet few studies mention their bryophytes. Perhaps this is because early estimates place stream bryophyte coverage at an insignificant 2%. However, data from 2019 show that contemporary coverage ranges from 4%–40% among streams. To investigate how stream bryophyte cover may be changing over time and influencing stream nutrient stocks, we conducted field surveys, measured organic and inorganic mass contents of bryophytes, and quantified nutrient uptake with bottle incubations of bryophyte mats. This study marks a novel attempt to map stream bryophyte coverage with estimates of carbon, phosphorus, and nitrogen stocks and fluxes. From our 2022 field surveys, we found that median bryophyte coverage can vary greatly across streams in the same catchment (0%–41.4%) and can also shift from just three years prior. We estimate that these bryophyte mats store between 14–414 g of organic matter per m2 of stream in the form of live biomass and captured particulates. Out of 36 bryophyte clump samples, 35 sorbed peak historical water column concentrations of PO43- measured within the Hubbard Brook stream chemistry record within 12 hours of light incubation. In Bear Brook, our scaled estimate of bryophyte mat nitrate uptake (2.3 g N y-1) constitutes a substantial portion of previously estimated whole-stream nitrate uptake (12 g N y-1). Cumulatively, our data demonstrates that bryophytes and their associated mineral substrates and biota—known as the bryosphere—are crucial in facilitating headwater stream nutrient cycling. These bryospheres may contribute significantly to interannual variability in stream nutrient concentrations within nutrient-poor streams, especially in climate-sensitive regions. These data were gathered as part of the Hubbard Brook Ecosystem Study (HBES). The HBES is a collaborative effort at the Hubbard Brook Experimental Forest, which is operated and maintained by the USDA Forest Service, Northern Research Station.

Publication Date:2024-05-08
For more information:
Visit: DOI PLACE HOLDER

Time Period
Begin:
2019
End:
2022

People and Organizations
Contact:Information Manager, Hubbard Brook LTER [  email ]
Creator:Steele, Jessee JB (Duke University)
Creator:Thellman, Audrey N (Duke University)
Creator:Vought, Olivia K (University of Michigan, Ph.D. Student)
Creator:Foster, Misaki (Duke University)
Associate:Bernhardt, Emily S (Duke University, Professor)
Associate:Rosi, Emma (Cary Institute of Ecosystem Studies, Research Scientist)
Associate:Wilson, Geoff (Cary Institute of Ecosystem Studies, Lab Manager)
Associate:Wooster, Tammy (Cary Institute of Ecosystem Studies, Field Technician)

Data Entities
Data Table Name:
Lateral_Survey_Data
Description:
Lateral stream survey data results from summer of 2022.
Data Table Name:
Longitudinal_Survey_Data
Description:
Data collected during summer 2022 bryophyte longitudinal surveys, walking upstream. This data describes the organic materials, mineral substrate sizes, and local habitat types across the surveyed HBEF streams.
Data Table Name:
mnp_watershed_labels
Description:
A simple spreadsheet used to organize which samples used to collect nitrate uptake data are associated with which survey stream.
Data Table Name:
moss_mass
Description:
A collection of stream bryophyte organic and inorganic mass samples. Samples were all retrieved from the streambed using a 6.8 cm diameter circle cutter. Sludge tins contain particulate matter trapped in bryophytes between 1.19 mm and 125 μm in size.
Data Table Name:
nitrate
Description:
Results of a nutrient incubation experiment conducted on stream bryophytes in 12-hours of light incubation followed by 12-hours of dark incubation.
Data Table Name:
nitrate_long
Description:
Results of a nutrient incubation experiment conducted on stream bryophytes in 12-hours of light incubation followed by 12-hours of dark incubation.
Data Table Name:
ov_test
Description:
Data collected during summer 2019 bryophyte surveys, walking upstream. This data describes the organic materials, mineral substrate sizes, and local habitat types across the surveyed HBEF streams.
Detailed Metadata

Data Entities


Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/knb-lter-hbr/400/1/3bc88181f6ff1967c88a9abb6e72d9c7
Name:Lateral_Survey_Data
Description:Lateral stream survey data results from summer of 2022.
Number of Records:147
Number of Columns:9

Table Structure
Object Name:Lateral_Survey_Data.csv
Size:5377 byte
Authentication:c5521c13ce8057c9e1bf00a552f22858 Calculated By MD5
Text Format:
Number of Header Lines:1
Record Delimiter:\r\n
Orientation:column
Simple Delimited:
Field Delimiter:,
Quote Character:"

Table Column Descriptions
 WatershedPointTransect NumberTotal Width (m)Wet Width (m)Total Moss (cm)Wet Moss (cm)Total Leaf Litter (cm)Wet Leaf Litter (cm)
Column Name:Watershed  
Point  
Transect Number  
Total Width (m)  
Wet Width (m)  
Total Moss (cm)  
Wet Moss (cm)  
Total Leaf Litter (cm)  
Wet Leaf Litter (cm)  
Definition:The study location within HBEFThe longitudinal survey point at which a lateral transect was taken.The ordered number of the transect within the watershed stream.Width of stream from side to side based on break in slope.Width of stream that is wet.Width of stream covered by bryophyte.Width of submerged bryophytes.Width of stream covered by leaf litter.Width of submerged leaf litter.
External Measurement Definition, Link: has unit Centimeter has unit Centimeter has unit Centimeter has unit Centimeter has unit Centimeter has unit Centimeter
Storage Type:string  
string  
string  
float  
float  
float  
float  
float  
float  
Measurement Type:nominalnominalnominalratioratioratioratioratioratio
Measurement Values Domain:
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeBear Brook
DefinitionName of stream: bear brook.
Source
Code Definition
CodeParadise Brook
DefinitionName of stream: paradise brook.
Source
Code Definition
CodeW1
DefinitionName of watershed where stream measurements were taken.
Source
Code Definition
CodeW2
DefinitionName of watershed where stream measurements were taken.
Source
Code Definition
CodeW3
DefinitionName of watershed where stream measurements were taken.
Source
Code Definition
CodeW4
DefinitionName of watershed where stream measurements were taken.
Source
Code Definition
CodeW5
DefinitionName of watershed where stream measurements were taken.
Source
Code Definition
CodeW6
DefinitionName of watershed where stream measurements were taken.
Source
Code Definition
CodeW9
DefinitionName of watershed where stream measurements were taken.
Source
Definitiontext
Definitiontext
Unitcentimeter
Typereal
Unitcentimeter
Typereal
Unitcentimeter
Typereal
Unitcentimeter
Typereal
Unitcentimeter
Typereal
Unitcentimeter
Typereal
Missing Value Code:      
CodeSNAKE
ExplCould not survey due to presence of snake.
CodeSNAKE
ExplCould not survey due to presence of snake.
CodeSNAKE
ExplCould not survey due to presence of snake.
CodeSNAKE
ExplCould not survey due to presence of snake.
CodeSNAKE
ExplCould not survey due to presence of snake.
CodeSNAKE
ExplCould not survey due to presence of snake.
Accuracy Report:                  
Accuracy Assessment:                  
Coverage:                  
Methods:                  

Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/knb-lter-hbr/400/1/49e8480f6dcb2f381891b9f2d787170f
Name:Longitudinal_Survey_Data
Description:Data collected during summer 2022 bryophyte longitudinal surveys, walking upstream. This data describes the organic materials, mineral substrate sizes, and local habitat types across the surveyed HBEF streams.
Number of Records:759
Number of Columns:7

Table Structure
Object Name:Longitudinal_Survey_Data.csv
Size:25623 byte
Authentication:f5f5356db56a96688931c7647be39862 Calculated By MD5
Text Format:
Number of Header Lines:1
Record Delimiter:\r\n
Orientation:column
Simple Delimited:
Field Delimiter:,
Quote Character:"

Table Column Descriptions
 WatershedPointCollection DateDepth (cm)OrganicsSubstrateHabitat
Column Name:Watershed  
Point  
Collection Date  
Depth (cm)  
Organics  
Substrate  
Habitat  
Definition:The study location within HBEFThe longitudinal survey point at which data was recorded.The date that data was recorded.The depth of the center of stream.The type of organic material at the survey point.They type of substrate at the survey point.They type of local habitat at the survey point.
External Measurement Definition, Link: has unit Centimeter
Storage Type:string  
string  
dateTime  
float  
string  
string  
string  
Measurement Type:nominalnominaldateTimerationominalnominalnominal
Measurement Values Domain:
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeBear Brook
DefinitionName of stream: bear brook.
Source
Code Definition
CodeParadise Brook
DefinitionName of stream: paradise brook.
Source
Code Definition
CodeW1
DefinitionName of watershed where stream measurements were taken.
Source
Code Definition
CodeW2
DefinitionName of watershed where stream measurements were taken.
Source
Code Definition
CodeW3
DefinitionName of watershed where stream measurements were taken.
Source
Code Definition
CodeW4
DefinitionName of watershed where stream measurements were taken.
Source
Code Definition
CodeW5
DefinitionName of watershed where stream measurements were taken.
Source
Code Definition
CodeW6
DefinitionName of watershed where stream measurements were taken.
Source
Code Definition
CodeW9
DefinitionName of watershed where stream measurements were taken.
Source
Definitiontext
FormatYYYY-MM-DD
Precision
Unitcentimeter
Typereal
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeB
DefinitionArtefact during survey transcription.
Source
Code Definition
Codedidn't record
DefinitionData not recorded for this point.
Source
Code Definition
CodeDM
DefinitionDry moss
Source
Code Definition
CodeF
DefinitionFilamentous algae
Source
Code Definition
CodeF, WM
DefinitionFilamentous algae in wet bryophyte
Source
Code Definition
CodeLP
DefinitionLeaf pack
Source
Code Definition
CodeLP, F
DefinitionLeaf pack, filamentous algae
Source
Code Definition
CodeLP, R
DefinitionArtefact during survey transcription.
Source
Code Definition
CodeLP, WM
DefinitionLeaf pack, bryophyte
Source
Code Definition
CodeLP, WM-
DefinitionLeaf pack, small bryophyte
Source
Code Definition
CodeM
DefinitionMicroalgae
Source
Code Definition
CodeM, WM
DefinitionMicroalgae, bryophyte
Source
Code Definition
CodeR
DefinitionArtefact during survey transcription.
Source
Code Definition
CodeS
DefinitionArtefact during survey transcription.
Source
Code Definition
CodeWM
DefinitionBryophyte
Source
Code Definition
CodeWM*
DefinitionBryophyte
Source
Code Definition
CodeWM+
DefinitionLarge bryophyte
Source
Code Definition
CodeWM+, F
DefinitionLarge bryophyte, filamentous algae
Source
Code Definition
CodeWM+, M
DefinitionLarge bryophyte, microalgae
Source
Code Definition
CodeWM, LP
DefinitionBryophyte, leaf pack
Source
Code Definition
CodeWM, M
DefinitionBryophyte, microalgae
Source
Code Definition
CodeWM-
DefinitionSmall bryophyte
Source
Code Definition
CodeWM- , LP
DefinitionSmall bryophyte, leaf pack
Source
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeB
DefinitionBoulder
Source
Code Definition
CodeBR
DefinitionBedrock
Source
Code Definition
CodeC
DefinitionCobble
Source
Code Definition
Codedidn't record
DefinitionData not recorded for this point.
Source
Code Definition
CodeP
DefinitionPebble
Source
Code Definition
CodeR
DefinitionRock
Source
Code Definition
CodeS
DefinitionSand
Source
Code Definition
CodeW
DefinitionWood
Source
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeBR
DefinitionArtefact during survey transcription.
Source
Code Definition
CodeC
DefinitionCascade
Source
Code Definition
CodeC-bot
DefinitionBottom of Cascade
Source
Code Definition
CodeC-mid
DefinitionMiddle of Cascade
Source
Code Definition
CodeC-top
DefinitionTop of Cascade
Source
Code Definition
Codedidn't record
DefinitionData not recorded for this point.
Source
Code Definition
CodeP
DefinitionPool
Source
Code Definition
CodeR
DefinitionRiffle
Source
Code Definition
CodeR/P
DefinitionPool with riffle characteristics.
Source
Code Definition
CodeS
DefinitionSlide
Source
Code Definition
CodeSTREAM SPLIT
DefinitionThe stream split at this point.
Source
Missing Value Code:      
Codedidn't record
ExplWas not able to record depth at this location.
     
Accuracy Report:              
Accuracy Assessment:              
Coverage:              
Methods:              

Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/knb-lter-hbr/400/1/b84f0dfdb0d481c3f24f76cb6fedd859
Name:mnp_watershed_labels
Description:A simple spreadsheet used to organize which samples used to collect nitrate uptake data are associated with which survey stream.
Number of Records:36
Number of Columns:2

Table Structure
Object Name:mnp_watershed_labels.csv
Size:516 byte
Authentication:26eca17c4f2a6f636b78106e7f71f46b Calculated By MD5
Text Format:
Number of Header Lines:1
Record Delimiter:\r\n
Orientation:column
Simple Delimited:
Field Delimiter:,
Quote Character:"

Table Column Descriptions
 Sample IDWatershed
Column Name:Sample ID  
Watershed  
Definition:The sample ID for bryophyte samples used in nutrient incubationThe study location within HBEF
Storage Type:string  
string  
Measurement Type:nominalnominal
Measurement Values Domain:
Definitiontext
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeCode
DefinitionDefinition
Source
Code Definition
CodeBear
DefinitionName of stream: bear brook.
Source
Code Definition
CodeParadise
DefinitionName of stream: paradise brook.
Source
Missing Value Code:    
Accuracy Report:    
Accuracy Assessment:    
Coverage:    
Methods:    

Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/knb-lter-hbr/400/1/19a358f16d0c22dcae5d470ecc93f294
Name:moss_mass
Description:A collection of stream bryophyte organic and inorganic mass samples. Samples were all retrieved from the streambed using a 6.8 cm diameter circle cutter. Sludge tins contain particulate matter trapped in bryophytes between 1.19 mm and 125 μm in size.
Number of Records:84
Number of Columns:16

Table Structure
Object Name:moss_mass.csv
Size:8363 byte
Authentication:98a93a379d3d8d9dbc637f10752b4ba1 Calculated By MD5
Text Format:
Number of Header Lines:1
Record Delimiter:\r\n
Orientation:column
Simple Delimited:
Field Delimiter:,
Quote Character:"

Table Column Descriptions
 WatershedPointSample IDGenus(es)Sludge Weighboat Mass (g)Sludge Weighboat + Dry Mass (g)Sludge Weighboat + Ashed Mass (g)Sludge Dry Sample Mass (g)Sludge Inorganic Sample Mass (g)Sludge Organic Sample Mass (g)Moss Weighboat Mass (g)Moss Weighboat + Dry Mass (g)Moss Weighboat + Ashed Mass (g)Moss Dry Mass (g)Moss Inorganic Mass (g)Moss Organic Mass (g)
Column Name:Watershed  
Point  
Sample ID  
Genus(es)  
Sludge Weighboat Mass (g)  
Sludge Weighboat + Dry Mass (g)  
Sludge Weighboat + Ashed Mass (g)  
Sludge Dry Sample Mass (g)  
Sludge Inorganic Sample Mass (g)  
Sludge Organic Sample Mass (g)  
Moss Weighboat Mass (g)  
Moss Weighboat + Dry Mass (g)  
Moss Weighboat + Ashed Mass (g)  
Moss Dry Mass (g)  
Moss Inorganic Mass (g)  
Moss Organic Mass (g)  
Definition:The study location within HBEF.The longitudinal survey point at which the bryophyte sample was taken.The sample ID associated with the bryophyte.The bryophyte genus(es) found within the sample.The mass of the metal weighboat holding particulate matter washed out of the bryophyte sample.The mass of the metal weighboat holding particulate matter washed out of the bryophyte sample plus the dry particulate matter mass.The mass of the metal weighboat holding particulate matter washed out of the bryophyte sample plus the AFDM particulate matter mass.The mass of dry particulate matter washed out of the bryophyte sample.The mass of inorganic particulate matter washed out of the bryophyte sample.The mass of organic particulate matter washed out of the bryophyte sample.The mass of the metal weighboat holding the washed bryophyte sample.The mass of the metal weighboat holding the washed bryophyte sample plus the dry mass of the washed bryophyte sample.The mass of the metal weighboat holding the washed bryophyte sample plus the AFDM of the washed bryophyte sample.The dry mass of the washed bryophyte sample.The inorganic mass of the washed bryophyte sample.The organic mass of the washed bryophyte sample.
External Measurement Definition, Link: has unit Gram has unit Gram has unit Gram has unit Gram has unit Gram has unit Gram has unit Gram has unit Gram has unit Gram has unit Gram has unit Gram has unit Gram
Storage Type:string  
string  
string  
string  
float  
float  
float  
float  
float  
float  
float  
float  
float  
float  
float  
float  
Measurement Type:nominalnominalnominalnominalratioratioratioratioratioratioratioratioratioratioratioratio
Measurement Values Domain:
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeBear
DefinitionName of stream: bear brook.
Source
Code Definition
CodeParadise
DefinitionName of stream: paradise brook.
Source
Code Definition
CodeW1
DefinitionName of watershed where stream measurements were taken.
Source
Code Definition
CodeW2
DefinitionName of watershed where stream measurements were taken.
Source
Code Definition
CodeW3
DefinitionName of watershed where stream measurements were taken.
Source
Code Definition
CodeW4
DefinitionName of watershed where stream measurements were taken.
Source
Code Definition
CodeW5
DefinitionName of watershed where stream measurements were taken.
Source
Code Definition
CodeW6
DefinitionName of watershed where stream measurements were taken.
Source
Code Definition
CodeW9
DefinitionName of watershed where stream measurements were taken.
Source
Definitiontext
Definitiontext
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeFontinalis
DefinitionContains Fontinalis sp.
Source
Code Definition
CodeFontinalis, Scapania
DefinitionContains Fontinalis sp. and Scapania sp.
Source
Code Definition
CodeScapania
DefinitionContains Scapania sp.
Source
Code Definition
CodeScapania?
DefinitionContains Scapania sp. at a lower confidence.
Source
Unitgram
Typereal
Unitgram
Typereal
Unitgram
Typereal
Unitgram
Typereal
Unitgram
Typereal
Unitgram
Typereal
Unitgram
Typereal
Unitgram
Typereal
Unitgram
Typereal
Unitgram
Typereal
Unitgram
Typereal
Unitgram
Typereal
Missing Value Code:                                
Accuracy Report:                                
Accuracy Assessment:                                
Coverage:                                
Methods:                                

Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/knb-lter-hbr/400/1/6b6274ba4c1fb86e58c862f239951b53
Name:nitrate
Description:Results of a nutrient incubation experiment conducted on stream bryophytes in 12-hours of light incubation followed by 12-hours of dark incubation.
Number of Records:36
Number of Columns:4

Table Structure
Object Name:nitrate.csv
Size:896 byte
Authentication:573e156102d565faf1afa5d902ef6cc0 Calculated By MD5
Text Format:
Number of Header Lines:1
Record Delimiter:\r\n
Orientation:column
Simple Delimited:
Field Delimiter:,
Quote Character:"

Table Column Descriptions
 Sample IDt1t2t3
Column Name:Sample ID  
t1  
t2  
t3  
Definition:The sample ID associated with the bryophyte sample in nutrient incubation.Water column N_NO3 concentration after amendment.Water column N_NO3 concentration after 12 hours of light incubation.Water column N_NO3 concentration after an additional 12 hours of dark incubation.
External Measurement Definition, Link: has unit Milligram Per Liter has unit Milligram Per Liter has unit Milligram Per Liter
Storage Type:string  
float  
float  
float  
Measurement Type:nominalratioratioratio
Measurement Values Domain:
Definitiontext
UnitmilligramPerLiter
Typereal
UnitmilligramPerLiter
Typereal
UnitmilligramPerLiter
Typereal
Missing Value Code:        
Accuracy Report:        
Accuracy Assessment:        
Coverage:        
Methods:        

Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/knb-lter-hbr/400/1/824bf506243e905cb0eb44683e0f2704
Name:nitrate_long
Description:Results of a nutrient incubation experiment conducted on stream bryophytes in 12-hours of light incubation followed by 12-hours of dark incubation.
Number of Records:108
Number of Columns:3

Table Structure
Object Name:nitrate_long.csv
Size:1715 byte
Authentication:a323bd7bf1fbc86eb1dfa429b2154fab Calculated By MD5
Text Format:
Number of Header Lines:1
Record Delimiter:\r\n
Orientation:column
Simple Delimited:
Field Delimiter:,
Quote Character:"

Table Column Descriptions
 Sample IDTimeN_NO3 (mg/L)
Column Name:Sample ID  
Time  
N_NO3 (mg/L)  
Definition:The sample ID associated with the bryophyte sample in nutrient incubation.The stage of incubation in which N_NO3 was measured.The N_NO3 concentration in the water column.
External Measurement Definition, Link: has unit Milligram Per Liter
Storage Type:string  
string  
float  
Measurement Type:nominalnominalratio
Measurement Values Domain:
Definitiontext
Allowed Values and Definitions
Enumerated Domain 
Code Definition
Codet1
DefinitionUpon amendment of nutrient spike.
Source
Code Definition
Codet2
DefinitionAfter 12 hours of light incubation.
Source
Code Definition
Codet3
DefinitionAfter additional 12 hours of dark incubation.
Source
UnitmilligramPerLiter
Typereal
Missing Value Code:      
Accuracy Report:      
Accuracy Assessment:      
Coverage:      
Methods:      

Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/knb-lter-hbr/400/1/c59c01fce8f7624c34deb108b19a7466
Name:ov_test
Description:Data collected during summer 2019 bryophyte surveys, walking upstream. This data describes the organic materials, mineral substrate sizes, and local habitat types across the surveyed HBEF streams.
Number of Records:3211
Number of Columns:7

Table Structure
Object Name:ov_test.csv
Size:90886 byte
Authentication:1cdc09aeefa60ff26a918ff18220ab9b Calculated By MD5
Text Format:
Number of Header Lines:1
Record Delimiter:\r\n
Orientation:column
Simple Delimited:
Field Delimiter:,
Quote Character:"

Table Column Descriptions
 DateTransectPoint (cm)BiotaSubstrateWater TypeSite
Column Name:Date  
Transect  
Point (cm)  
Biota  
Substrate  
Water Type  
Site  
Definition:The date that data was recorded.The ordered number of the transect within the watershed stream.The distance upstream at which the transect was taken.The type of organic material at the survey point.The type of substrate at the survey point.The type of local habitat at the survey point.The study location within HBEF
External Measurement Definition, Link: has unit Centimeter
Storage Type:dateTime  
string  
float  
string  
string  
string  
string  
Measurement Type:dateTimenominalrationominalnominalnominalnominal
Measurement Values Domain:
FormatYYYY-MM-DD
Precision
Definitiontext
Unitcentimeter
Typeinteger
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeB
DefinitionArtefact during survey transcription.
Source
Code Definition
CodeD
DefinitionArtefact during survey transcription.
Source
Code Definition
CodeDm
DefinitionDry Bryophyte
Source
Code Definition
CodeLp
DefinitionLeaf Pack
Source
Code Definition
CodeM
DefinitionMicroalgae
Source
Code Definition
CodeW
DefinitionWood
Source
Code Definition
CodeWm
DefinitionWet Bryophyte
Source
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeB
DefinitionBoulder
Source
Code Definition
CodeBr
DefinitionBedrock
Source
Code Definition
CodeC
DefinitionCobble
Source
Code Definition
CodeD
DefinitionArtefact during survey transcription.
Source
Code Definition
CodeP
DefinitionPebble
Source
Code Definition
CodeS
DefinitionSand
Source
Code Definition
CodeW
DefinitionWood
Source
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeB
DefinitionArtefact during survey transcription.
Source
Code Definition
CodeC
DefinitionCascade
Source
Code Definition
CodeE
DefinitionArtefact during survey transcription.
Source
Code Definition
CodeP
DefinitionPool
Source
Code Definition
CodeR
DefinitionRiffle
Source
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeBB
DefinitionName of stream: bear brook.
Source
Code Definition
CodePB
DefinitionName of stream: paradise brook.
Source
Code Definition
CodeWs 4
DefinitionName of watershed where stream measurements were taken.
Source
Code Definition
CodeWS1
DefinitionName of watershed where stream measurements were taken.
Source
Code Definition
CodeWS2
DefinitionName of watershed where stream measurements were taken.
Source
Code Definition
CodeWS3
DefinitionName of watershed where stream measurements were taken.
Source
Code Definition
CodeWS5
DefinitionName of watershed where stream measurements were taken.
Source
Code Definition
CodeWS6
DefinitionName of watershed where stream measurements were taken.
Source
Code Definition
CodeWs8
DefinitionName of watershed where stream measurements were taken.
Source
Code Definition
CodeWS9
DefinitionName of watershed where stream measurements were taken.
Source
Missing Value Code:              
Accuracy Report:              
Accuracy Assessment:              
Coverage:              
Methods:              

Data Package Usage Rights

This information is released under the Creative Commons license - Attribution - CC BY (https://creativecommons.org/licenses/by/4.0/). The consumer of these data ("Data User" herein) is required to cite it appropriately in any publication that results from its use. The Data User should realize that these data may be actively used by others for ongoing research and that coordination may be necessary to prevent duplicate publication. The Data User is urged to contact the authors of these data if any questions about methodology or results occur. Where appropriate, the Data User is encouraged to consider collaboration or co-authorship with the authors. The Data User should realize that misinterpretation of data may occur if used out of context of the original study. While substantial efforts are made to ensure the accuracy of data and associated documentation, complete accuracy of data sets cannot be guaranteed. All data are made available "as is." The Data User should be aware, however, that data are updated periodically and it is the responsibility of the Data User to check for new versions of the data. The data authors and the repository where these data were obtained shall not be liable for damages resulting from any use or misinterpretation of the data. Thank you.

Keywords

By Thesaurus:
HBES VocabularyHBR, Hubbard Brook Ecosystem Study, Hubbard Brook Experimental Forest, Hubbard Brook LTER
LTER Controlled Vocabularyecosystems, streams, watersheds, bryophytes, nitrate, organic matter, biogeochemistry
LTER Core Research Areadisturbance patterns
National Research & Development TaxonomyEcology, Ecosystems, & Environment

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

Methods and protocols used in the collection of this data package
Description:

Stream surveys:

We surveyed 50-meter stream reaches beginning above the gauging weir for numbered watersheds (1, 2, 3, 4, 5, 6, and 9) and quasi-random 200-meter stream reaches in Bear Brook and Paradise Brook. In each stream reach, we conducted longitudinal surveys (along the stream) and lateral surveys (across the stream). For the longitudinal surveys, walking upstream, we recorded stream characteristics at every meter: depth in the center of flow, habitat type (pool, riffle, slide, or cascade), substrate (boulder, bedrock, cobble, pebble, sand, or wood), and any present organic material (e.g., stick, algae, leaf litter, bryophyte). For our lateral surveys, in the 50-meter stream reaches (W1-6, 9), we randomly selected 10 longitudinal meter markers to conduct transects. We divided the 200-meter stream reaches (Bear and Paradise Brook) into four 50-meter segments and randomly selected 10 longitudinal meter markers to conduct lateral transects in each of the segments. At the lateral transect markers, we recorded the width, bryophyte coverage, and leaf litter coverage for both wetted and active channel cross sections. We defined the active channel margins by breaks in slope. We avoided seeps and additional nutrient inputs in our stretches.

Description:

Nutrient incubation:

We collected 18 bryophyte samples from each of the 200 meter reaches in Bear Brook and Paradise Brook, for a total of 36 samples which were used in lab incubations to measure nutrient uptake. All samples were collected using a circular cutter with a 6.8 cm diameter. Using data from our 2022 longitudinal surveys, we used a stratified random selection of sampling sites where we observed bryophytes, with the goal of collecting replicate samples from across the distribution of habitat types, for a total of 6 samples per habitat (cascade, pool, and slide) in each of the two streams.

Once all samples were collected, we prepared our bryophyte samples for nutrient incubation. We drained excess water from bryophyte samples on a sieve and placed them right-side-up in open pint mason jars. These jars were each filled with 400 mL of water from Paradise Brook, removing air bubbles caught in the bryophyte samples. We placed these jars into a tray using randomly generated numbers to assign location in the tray and water sampling order. The tray was pre-filled with enough water to submerge the bottom half of the jars and maintain them at ambient summer water temperatures (12C) in a refrigerator. The jars were then covered by foil and allowed to rest for 24 hours in the dark at 12C to allow suspended sediments to settle.

After this settling period, the overlying solutions were mixed by withdrawing water near the top of the bryophyte clump with a syringe and reintroducing that water near the top of the jar. This was repeated three times. After mixing we removed 120 mL of stream water and measured initial nitrate and phosphate concentrations for these pre-incubation samples. The volume of water removed was replaced by 120 mL of nitrate and phosphate stock (1.06 mg/L NO3-N and 0.012 mg/L PO4-P, respectively, made from KNO3 and KH2PO4). The samples were incubated for 12 hours under a grow-light and 12 hours in the dark at 12oC. We collected 60 mL of water after both 12-hr light and dark incubations were completed, filtering the samples through a Whatman GF/F glass fiber filter (0.7 µm). The filtered water samples were frozen until they could be analyzed on an ion chromatograph (Dionex ICS-2000 with an AS-18 analytical column) for their nitrate and phosphate concentrations. Here, we have only included nitrate data because almost all samples reported phosphate levels that were below detection after incubation.

Description:

Bryophyte masses:

In addition to the 36 bryophyte clumps collected from Bear Brook and Paradise Brook for nutrient incubation, we collected samples from at least 5 lateral transects in each upper watershed (W1-6, 9), for a total of 84 bryophyte samples for nutrient stock analysis. To prepare the sample for desiccation, depending on the size of the sample, we rinsed it in a tub with 2 L of DI water or a specimen cup with 100 mL of DI water. We then poured the sample through stacked sieves (1.19 mm and 125 μm) into a pre-weighed container and recorded the mass of the filtrate. Coarse materials caught in the top sieve (>1.19 mm) were placed in a paper bag, while fine materials caught in the bottom sieve (between 125 μm and 1.19 mm) were placed in pre-weighed aluminum tins. All samples were air dried and weighed for months, which may have introduced variability in mass measurements due to water retention. Once dry mass was recorded for all samples, they were heated to 550C for 2 hours in a muffle furnace to combust all organic material in accordance with methods described by (Benfield et al. 2017). The resulting ash-free dry mass was then weighed.

People and Organizations

Publishers:
Organization:Environmental Data Initiative
Email Address:
info@edirepository.org
Web Address:
https://edirepository.org
Id:https://ror.org/0330j0z60
Creators:
Individual: Jessee JB Steele
Organization:Duke University
Email Address:
steele.jessee@gmail.com
Id:https://orcid.org/0009-0007-7627-2917
Id:https://ror.org/00py81415
Individual: Audrey N Thellman
Organization:Duke University
Email Address:
audrey.thellman@duke.edu
Id:https://orcid.org/0000-0003-3716-6664
Id:https://ror.org/00py81415
Individual: Olivia K Vought
Organization:University of Michigan
Position:Ph.D. Student
Email Address:
ovought@umich.edu
Individual: Misaki Foster
Organization:Duke University
Email Address:
misaki.foster@duke.edu
Contacts:
Position:Information Manager, Hubbard Brook LTER
Address:
234 Mirror Lake Road,
North Woodstock, NH 03262 USA
Phone:
(603) 726-8902 (voice)
Email Address:
hbr-im@lternet.edu
Web Address:
http://www.hubbardbrook.org
Associated Parties:
Individual: Emily S Bernhardt
Organization:Duke University
Email Address:
emily.bernhardt@duke.edu
Role:Professor
Individual: Emma Rosi
Organization:Cary Institute of Ecosystem Studies
Email Address:
rosie@caryinstitute.org
Role:Research Scientist
Individual: Geoff Wilson
Organization:Cary Institute of Ecosystem Studies
Role:Lab Manager
Individual: Tammy Wooster
Organization:Cary Institute of Ecosystem Studies
Email Address:
woostert@caryinstitute.org
Role:Field Technician

Temporal, Geographic and Taxonomic Coverage

Temporal, Geographic and/or Taxonomic information that applies to all data in this dataset:

Time Period
Begin:
2019
End:
2022
Geographic Region:
Description:Hubbard Brook Experimental Forest
Bounding Coordinates:
Northern:  43.959Southern:  43.914
Western:  -71.8062Eastern:  -71.7022
Taxonomic Range:
Classification:
Rank Name:Kingdom
Rank Value:Viridiplantae
Common Name:green plants
Identifer:National Center for Biotechnology Information - Taxonomy (NCBI)
Info for ID: 33090 (Viridiplantae)
Classification:
Rank Name:Phylum
Rank Value:Streptophyta
Identifer:National Center for Biotechnology Information - Taxonomy (NCBI)
Info for ID: 35493 (Streptophyta)
Classification:
Rank Name:Subphylum
Rank Value:Streptophytina
Identifer:National Center for Biotechnology Information - Taxonomy (NCBI)
Info for ID: 131221 (Streptophytina)
Classification:
Rank Name:Class
Rank Value:Jungermanniopsida
Identifer:National Center for Biotechnology Information - Taxonomy (NCBI)
Info for ID: 186771 (Jungermanniopsida)
Classification:
Rank Name:Subclass
Rank Value:Jungermanniidae
Identifer:National Center for Biotechnology Information - Taxonomy (NCBI)
Info for ID: 186782 (Jungermanniidae)
Classification:
Rank Name:Order
Rank Value:Jungermanniales
Identifer:National Center for Biotechnology Information - Taxonomy (NCBI)
Info for ID: 3199 (Jungermanniales)
Classification:
Rank Name:Suborder
Rank Value:Cephaloziineae
Identifer:National Center for Biotechnology Information - Taxonomy (NCBI)
Info for ID: 71154 (Cephaloziineae)
Classification:
Rank Name:Family
Rank Value:Scapaniaceae
Identifer:National Center for Biotechnology Information - Taxonomy (NCBI)
Info for ID: 41845 (Scapaniaceae)
Classification:
Rank Name:Genus
Rank Value:Scapania
Identifer:National Center for Biotechnology Information - Taxonomy (NCBI)
Info for ID: 41847 (Scapania)
Classification:
Rank Name:Species
Rank Value:Scapania undulata
Identifer:National Center for Biotechnology Information - Taxonomy (NCBI)
Info for ID: 215256 (Scapania undulata)
Taxonomic Range:
Classification:
Rank Name:Kingdom
Rank Value:Viridiplantae
Common Name:green plants
Identifer:National Center for Biotechnology Information - Taxonomy (NCBI)
Info for ID: 33090 (Viridiplantae)
Classification:
Rank Name:Phylum
Rank Value:Streptophyta
Identifer:National Center for Biotechnology Information - Taxonomy (NCBI)
Info for ID: 35493 (Streptophyta)
Classification:
Rank Name:Subphylum
Rank Value:Streptophytina
Identifer:National Center for Biotechnology Information - Taxonomy (NCBI)
Info for ID: 131221 (Streptophytina)
Classification:
Rank Name:Class
Rank Value:Bryopsida
Identifer:National Center for Biotechnology Information - Taxonomy (NCBI)
Info for ID: 3214 (Bryopsida)
Classification:
Rank Name:Subclass
Rank Value:Bryidae
Identifer:National Center for Biotechnology Information - Taxonomy (NCBI)
Info for ID: 114658 (Bryidae)
Classification:
Rank Name:Superorder
Rank Value:Hypnanae
Identifer:National Center for Biotechnology Information - Taxonomy (NCBI)
Info for ID: 404315 (Hypnanae)
Classification:
Rank Name:Order
Rank Value:Hypnales
Identifer:National Center for Biotechnology Information - Taxonomy (NCBI)
Info for ID: 13798 (Hypnales)
Classification:
Rank Name:Family
Rank Value:Fontinalaceae
Identifer:National Center for Biotechnology Information - Taxonomy (NCBI)
Info for ID: 67432 (Fontinalaceae)
Classification:
Rank Name:Genus
Rank Value:Fontinalis
Identifer:National Center for Biotechnology Information - Taxonomy (NCBI)
Info for ID: 67433 (Fontinalis)
Classification:
Rank Name:Species
Rank Value:Fontinalis antipyretica
Identifer:National Center for Biotechnology Information - Taxonomy (NCBI)
Info for ID: 67435 (Fontinalis antipyretica)

Project

Parent Project Information:

Title:Hubbard Brook HBWatER Stream Bryophyte Studies
Personnel:
Individual: Christopher T Solomon
Organization:Cary Institute of Ecosystem Studies
Address:
PO AB,
Millbrook, NY 12545
Phone:
845 677-7600 x133 (voice)
Email Address:
solomonc@caryinstitute.org
Web Address:
https://www.caryinstitute.org/science/our-scientists/dr-christopher-t-solomon
Id:https://orcid.org/0000-0002-2850-4257
Id:https://ror.org/01dhcyx48
Role:Project lead
Individual: Emma J Rosi
Organization:Cary Institute of Ecosystem Studies
Email Address:
rosie@caryinstitute.org
Id:https://orcid.org/0000-0002-3476-6368
Additional Award Information:
Funder:National Science Foundation
Funder ID:https://ror.org/021nxhr62
Number:1907683
Title:LTREB: Streams to Screens: Bringing the Hubbard Brook Watershed Ecosystem Record (HB-WatER) into the 21st Century (2019-07-01 to 2024-06-30)
URL:https://www.nsf.gov/awardsearch/showAward?AWD_ID=1907683&HistoricalAwards=false
Additional Award Information:
Funder:National Science Foundation
Funder ID:https://ror.org/021nxhr62
Number:1256696
Title:LTREB Renewal at Hubbard Brook: Hydrologic-nutrient cycle interaction in small, undisturbed and human-manipulated ecosystems (2013-03-01 to 2020-02-29)
URL:https://www.nsf.gov/awardsearch/showAward?AWD_ID=1256696&HistoricalAwards=false
Additional Award Information:
Funder:National Science Foundation
Number:1637685
Title:LTER: Long Term Ecological Research at the Hubbard Brook Experimental Forest (2016)

Maintenance

Maintenance:
Description:

This study is complete.

Frequency:notPlanned
Other Metadata

Additional Metadata

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