Data Package Metadata   View Summary

Arthropod pitfall trap data from 12 NPP study locations at the Jornada Basin LTER site, 1996-2001

General Information
Data Package:
Local Identifier:knb-lter-jrn.210008001.79
Title:Arthropod pitfall trap data from 12 NPP study locations at the Jornada Basin LTER site, 1996-2001
Alternate Identifier:DOI PLACE HOLDER
Abstract:

This data package contains counts and taxonomic identification of arthropods sampled by pitfall traps at the Jornada Basin LTER site from 1996-2001. The objective of this study is to observe how shifts in vegetation resulting from desertification processes in the Chihuahaun desert have changed the spatial and temporal availability of resources for consumers. Desertification changes in the Jornada Basin include changes from grass to shrub dominated communities and major soil changes. If grassland systems respond to rainfall without significant lags, but shrub systems do not, then consumer species should reflect these differences. In addition, shifts from grassland to shrubland results in greater structural heterogeneity of the habitats. We hypothesized that consumer populations, diversity, and densities of some consumers will be higher in grasslands than in shrublands and will be related to the NPP of the sites. Data on arthropods captured in pitfall traps at LTER III consumer plots (a subset of NPP plots) were collected at 2 month intervals. Data includes number of individuals, order, family, genus, and species. This data collection has been completed.

Publication Date:2020-10-17

Time Period
Begin:
1996-02-16
End:
2001-08-17

People and Organizations
Contact:Anderson, John (New Mexico State University) [  email ]
Contact:Lightfoot, David (Jornada Basin LTER (now at Univ. of NM)) [  email ]
Contact:Data Manager(Jornada Basin LTER) [  email ]
Creator:Lightfoot, David (Jornada Basin LTER (now at Univ. of NM))
Creator:Whitford, Walter G (New Mexico State University)

Data Entities
Data Table Name:
Arthropod pitfall data file
Description:
Count and taxonomic ID of captured arthropods at 12 sites, 1996-2001
Other Name:
Taxonomic codes text file
Description:
Key to codes used in Order, Family, Genus, Species columns of the data file
Other Name:
JRN DSD file (Dataset Documentation)
Description:
Early format Jornada metadata file for this dataset
Detailed Metadata

Data Entities


Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/knb-lter-jrn/210008001/79/7e5c67ae8b4ff447a22aa2f331a4fa16
Name:Arthropod pitfall data file
Description:Count and taxonomic ID of captured arthropods at 12 sites, 1996-2001
Number of Records:2902
Number of Columns:11

Table Structure
Object Name:JRNstudy_008001_arthropod_pitfall_data_96-01.csv
Size:127350 bytes
Authentication:6e03f80d81a9a5907a8b0cef4e925ac7 Calculated By MD5
Text Format:
Number of Header Lines:1
Record Delimiter:\n
Orientation:column
Simple Delimited:
Field Delimiter:,

Table Column Descriptions
 
Column Name:period  
date  
zone  
site  
plot  
trap  
order  
family  
genus  
species  
count  
Definition:Collection period string (month and year, formatted as mmmYYYY)Collection dateVegetation zone (C, G, P, M, T)Site location - 4 letter codePlot ID (A-E)Trap ID (1-5)Two letter or numeric code for taxonomic order (XX = nothing collected)Two letter or numeric code for taxonomic family (XX = nothing collected)Two letter or numeric code for taxonomic genus (XX = nothing collected)Two letter or numeric code for taxonomic species (XX = nothing collected)Number of individuals collected
Storage Type:string  
date  
string  
string  
string  
float  
string  
string  
string  
string  
float  
Measurement Type:nominaldateTimenominalnominalnominalrationominalnominalnominalnominalratio
Measurement Values Domain:
DefinitionCollection period string (month and year, formatted as mmmYYYY)
FormatYYYY-MM-DD
Precision
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeC
DefinitionCreosotebush
Source
Code Definition
CodeG
DefinitionGrassland
Source
Code Definition
CodeM
DefinitionMesquite Dune
Source
Code Definition
CodeT
DefinitionTarbush
Source
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeCALI
Definitioncreosotebush Caliche
Source
Code Definition
CodeGRAV
Definitioncreosotebush Gravel
Source
Code Definition
CodeSAND
Definitioncreosotebush Sand
Source
Code Definition
CodeBASN
Definitiongrassland at lower trailer (BASIN)
Source
Code Definition
CodeIBPE
Definitiongrassland at IBP exclosure
Source
Code Definition
CodeSUMM
Definitiongrassland Mt Summerford site
Source
Code Definition
CodeNORT
DefinitionMesquite North site
Source
Code Definition
CodeRABB
Definitionmesquite at Rabbit Rain gauge
Source
Code Definition
CodeWELL
Definitionmesquite at West Well
Source
Code Definition
CodeEAST
Definitiontarbush east of Jornada road
Source
Code Definition
CodeTAYL
Definitiontarbush Taylor well site
Source
Code Definition
CodeWEST
Definitiontarbush west of Jornada road
Source
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeA
DefinitionPlot A
Source
Code Definition
CodeD
DefinitionPlot D
Source
Code Definition
CodeB
DefinitionPlot B
Source
Code Definition
CodeC
DefinitionPlot C
Source
Code Definition
CodeE
DefinitionPlot E
Source
Unitnumber
Typenatural
Min
Max
DefinitionTwo letter or numeric code for taxonomic order (XX = nothing collected)
DefinitionTwo letter or numeric code for taxonomic family (XX = nothing collected)
DefinitionTwo letter or numeric code for taxonomic genus (XX = nothing collected)
DefinitionTwo letter or numeric code for taxonomic species (XX = nothing collected)
Unitnumber
Typewhole
Min
Max35 
Missing Value Code:            
CodeNA
Explno arthropods collected
CodeNA
Explno arthropods collected
CodeNA
Explno arthropods collected
CodeNA
Explno arthropods collected
CodeNA
Explno arthropods collected
Accuracy Report:                      
Accuracy Assessment:                      
Coverage:                      
Methods:                      

Non-Categorized Data Resource

Name:Taxonomic codes text file
Entity Type:unknown
Description:Key to codes used in Order, Family, Genus, Species columns of the data file
Physical Structure Description:
Object Name:jorn-arthpit-taxa-lst.txt
Size:13752 bytes
Authentication:6538dd7966e57e52b609a4da23fc7581 Calculated By MD5
Externally Defined Format:
Format Name:text/plain
Data:https://pasta-s.lternet.edu/package/data/eml/knb-lter-jrn/210008001/79/717b51c16318540b2312e545806a63ff

Non-Categorized Data Resource

Name:JRN DSD file (Dataset Documentation)
Entity Type:unknown
Description:Early format Jornada metadata file for this dataset
Physical Structure Description:
Object Name:arthpit3.dsd.txt
Size:23376 bytes
Authentication:1100a96a16e571fbb5eb2e3bada190c7 Calculated By MD5
Externally Defined Format:
Format Name:text/plain
Data:https://pasta-s.lternet.edu/package/data/eml/knb-lter-jrn/210008001/79/392ffff125b26f947b8cfc5727b5b805

Data Package Usage Rights

This information is released under the Creative Commons license - Attribution - CC BY (https://creativecommons.org/licenses/by/4.0/). The consumer of these data ("Data User" herein) has an ethical obligation to cite it appropriately in any publication that results from its use. The Data User should realize that these data may be actively used by others for ongoing research and that coordination may be necessary to prevent duplicate publication. The Data User is urged to contact the authors of these data if any questions about methodology or results occur. Where appropriate, the Data User is encouraged to consider collaboration or co-authorship with the authors. The Data User should realize that misinterpretation of data may occur if used out of context of the original study. While substantial efforts are made to ensure the accuracy of data and associated documentation, complete accuracy of data sets cannot be guaranteed. All data are made available "as is." The Data User should be aware, however, that data are updated periodically and it is the responsibility of the Data User to check for new versions of the data. The data authors and the repository where these data were obtained shall not be liable for damages resulting from any use or misinterpretation of the data. Thank you.

Keywords

By Thesaurus:
LTER Core AreaPopulations
LTER Controlled Vocabularyinsects, arthropods, diversity, density, pitfall traps, populations, consumers
JRN Dataset KeywordsLTER II, LTER III
Jornada Place NamesC-CALI, C-GRAV, C-SAND, G-BASN, G-IBPE, G-SUMM, M-NORT, M-RABB, M-WELL, T-EAST, T-TAYL, T-WEST, JER, CDRRC
Jornada Project Namesstudy 008

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

Methods and protocols used in the collection of this data package
Description:

Methods:

Arthropod pitfalls were established in January of 1995 at the start of LTER III; this design is significantly different from the pitfalls of LTER II, when lizards and arthropods were collected in the same traps. The newer arthropod pitfalls consisted of a small tin can (buried flush with the soil surface) in which a plastic cup (10 oz.) fits snugly. The cup was filled (about 3/4 full) with propylene glycol (the "non-toxic" antifreeze, Sierra brand) which captures and preserves any arthropods that stumble in. A ceramic tile shaded the trap, supported by 4 nails sticking about 1" above the ground.

To minimize rodent damage to the pitfalls, chicken wire fences with lids were installed around each trap. Unfortunately, rodents or lizards smaller than the holes in the chicken wire continued to cause significant damage to the traps after the exclosures were added, so in June 1996, hardware cloth collars were also added to the pitfalls. These collars were squares about 10" on a side with a hole cut in the center for the can and cup combination. Additional holes were cut for any grass clumps surrounding the pitfalls to minimize disturbance to the vegetation. They were buried under a thin layer of soil. Because of concern about the numbers of vertebrates (small rodents and lizards) being caught in the pitfalls, in February 1996, 1/4" hardware cloth ladders (5 " long x 3/4 " wide) were added to the traps. It was hoped that rodents and lizards would be able to escape, while arthropods would not (due to the strength of the surface tension of propylene glycol).

The traps were continuously open, and the arthropods in them collected, identified, and counted every 2 months. If there were no arthopods in the trap (count=0) then all taxonomic columns in the data file are filled with 'XX'.

If time permitted, during the month in between collections, the traps were checked once, to top off the propylene glycol, and repair any wind/rain/rodent/coyote/vandal damage. During windy seasons, the traps at M-RABB and M-NORT sometimes needed to be collected monthly because of large volumes of sand collecting in the cups. This occurred if cups became close to 1/2 full of sand in one month’s time.

There are five arthropod pitfalls at each of the NPP study sites, excluding the playas. The five traps are in a line, 15m from each other, marked with orange pin flags. The following list tells where the line of traps for each site was, relative to the NPP grid: C-GRAV=NW corner, C- SAND=south side, C-CALI=SW corner, G-SUMM=NE corner, G- BASN=east side, G-IBPE=NW corner, M-WELL=east side, M- RABB=west side, M-NORT=south side, T-TAYL=east side, T- EAST=east side, T-WEST=south side. In addition, from January 1995 to March 1997, at G-IBPE and C-SAND, there were 12 extra pitfalls, used in a cross-site study for comparison to data from the Sevilleta and Bandelier. These extra pitfalls were in 4 sets of 3, distributed on all sides of the NPP grid (see maps). Each trap was numbered for identification, and these numbers were written on the underside of the tile over each trap.

Additional files

'jorn-arthpit-taxa-lst.txt' is a text file describing the taxonomic codes used in the data file (order, family, genus, and species columns). The 'Taxon Code' column should match (at least some of) the taxonomic codes in the data file.

'arthpit3.dsd' is a metadata file created during the time of the study. It contains additional metadata that may not have been placed into the current EML file for this data package.

Related publications

Lightfoot, D. C., Brantley, S. L., & Allen, C. D. (2008). Geographic patterns of ground-dwelling arthropods across an ecoregional transition in the North American Southwest. Western North American Naturalist, 68(1), 83-102.

People and Organizations

Publishers:
Organization:Environmental Data Initiative
Email Address:
info@environmentaldatainitiative.org
Web Address:
https://environmentaldatainitiative.org
Creators:
Individual: David Lightfoot
Organization:Jornada Basin LTER (now at Univ. of NM)
Individual: Walter G Whitford
Organization:New Mexico State University
Id:https://orcid.org/0000-0003-1155-6162
Contacts:
Individual: John Anderson
Organization:New Mexico State University
Email Address:
0000-0001-5060-9955
Id:https://orcid.org/0000-0002-6417-8022
Individual: David Lightfoot
Organization:Jornada Basin LTER (now at Univ. of NM)
Email Address:
dlightfo@unm.edu
Individual: Data Manager
Organization:Jornada Basin LTER
Email Address:
datamanager.jrn.lter@gmail.com

Temporal, Geographic and Taxonomic Coverage

Temporal, Geographic and/or Taxonomic information that applies to all data in this dataset:

Time Period
Begin:
1996-02-16
End:
2001-08-17
Geographic Region:
Description:Arthropod pitfall traps were at 12 of of the 15 NPP sites, spanning 4 vegetation community types in the Jornada Basin. This bounding box includes all 12 sites. More precise geographic coordinates for this study may be requested from the JRN LTER Data Manager.
Bounding Coordinates:
Northern:  32.669Southern:  32.488
Western:  -106.865Eastern:  -106.713

Project

Parent Project Information:

Title:Jornada Basin LTER II/III
Personnel:
Individual: William Schlesinger
Organization:Duke University
Id:https://orcid.org/0000-0002-1391-0885
Role:Principal Investigator
Funding: NSF DEB-9411971
Related Project:
Title:Jornada Basin LTER II/III
Personnel:
Individual: Walter G Whitford
Organization:New Mexico State University
Id:https://orcid.org/0000-0003-1155-6162
Role:Principal Investigator
Funding: NSF DEB-9411971

Maintenance

Maintenance:
Description:completed
Frequency:

Additional Info

Additional Information:
 

Jornada LTER III arthropod pitfalls are located at each of the NPP study sites, excluding the 3 playas. (T-WEST, T-EAST, T-TAYL, M-NORT, M-RABB, M-WELL, G-IBPE, G-BASN, G-SUMM, C-SAND, C-CALI, C-GRAV) The following list gives the location for the line of traps for each site relative to the NPP grid: C-GRAV NW corner C-SAND south side C-CALI SW corner G-SUMM NE corner G-BASN east side G-IBPE NW corner M-WELL east side M-RABB west wide M-NORT south side T-TAYL east side T-EAST east side T-WEST south side In addition, there were 12 additional pitfalls at G-IBPE and C-SAND which were used in a cross-site study for comparison to data from the Sevilleta dn Bandelier. These extra pitfalls were in 4 sets of 3, distributed on all sides of the NPP grid (see maps). Each trap was numbered for identification, and these numbers are written on the underside of the tile over each trap. The 12 additional cross-site study pitfall traps were terminated in March 1997.

Other Metadata

EDI is a collaboration between the University of New Mexico and the University of Wisconsin – Madison, Center for Limnology:

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