Data Package Metadata   View Summary

Annual measurements of vegetation canopy and basal gap intercepts from the three Conmod Pilot study locations at Jornada Basin LTER, 2008-2016

General Information
Data Package:
Local Identifier:knb-lter-jrn.210308001.2
Title:Annual measurements of vegetation canopy and basal gap intercepts from the three Conmod Pilot study locations at Jornada Basin LTER, 2008-2016
Alternate Identifier:DOI PLACE HOLDER
Abstract:

This data package contains annual measurements of vegetation canopy and basal gap sizes from transects at the Connectivity Modifier (Conmod) Pilot study on the Jornada Experimental Range from 2008-2016. There were 3 sites for this study: Gravelly Ridges, Aeolian, and Dona Ana. Within each site, there were 8 study plots, 4 of which were treatment plots where connectivity modules (conmods) were installed to decrease gap sizes between perennial vegetation. The plots were 8 x 8 meters and had an 8 x 8 meter buffer zone on both sides of the plot (upwind and downwind). Beginning in 2008, vegetation canopy and basal gap sizes were collected annually in all plots using the gap intercept method. These data were collected in 2008-2010, 2012 and 2016. At each plot, four parallel 24-meter transects crossing the upwind buffer, the plot, and the downwind buffer were measured. These parallel transects were spaced at 0.8, 2.8, 4.3, and 7.2 meter intervals across the plot and buffer areas. This study is complete (finished in 2016) and was the pilot study to the newer Cross Scale Interactions Study.

Publication Date:2019-10-28

Time Period
Begin:
2008-06-10
End:
2016-11-02

People and Organizations
Contact:Peters, Debra (USDA-ARS Jornada Experimental Range) 
Contact:Manager, Data (Jornada Basin LTER) [  email ]
Creator:Okin, Gregory S (University of California Los Angeles)
Creator:Peters, Debra (USDA-ARS Jornada Experimental Range)
Creator:Herrick, Jeff (USDA-ARS Jornada Experimental Range)

Data Entities
Data Table Name:
Canopy and basal gap intercepts in centimeters
Description:
Canopy and basal gap intercepts in centimeters
Other Name:
Comment history for Conmod Pilot data
Description:
Comment history for Conmod Pilot data
Other Name:
Treatment and measurement design schematic for Conmod Pilot sites
Description:
Treatment and measurement design schematic for Conmod Pilot sites
Detailed Metadata

Data Entities


Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/knb-lter-jrn/210308001/2/e1aa6ccb5d3ced40b6b17ecc33f5f358
Name:Canopy and basal gap intercepts in centimeters
Description:Canopy and basal gap intercepts in centimeters
Number of Records:8759
Number of Columns:9

Table Structure
Object Name:JRN_308001_conmod_pilot_canopy_basal_gapint.csv
Size:342056 bytes
Authentication:4aa6e2d445cea4d0af7b1bfbfa09eefa Calculated By MD5
Text Format:
Number of Header Lines:1
Record Delimiter:\n
Orientation:column
Simple Delimited:
Field Delimiter:,

Table Column Descriptions
 
Column Name:Site  
Plot  
Line  
Date  
Type  
Start  
End  
Gap  
Treatment  
Definition:Site identifier [ LTER Aeolian, LTER Dona Ana, LTER Gravelly Ridges ]Plot number [1-8]Transect number and buffer location [ 1-4; 1 Buffer down - 4 Buffer down; 1 Buffer up - 4 Buffer up ]Sample dateType of gap [ B or C ]Distance of start of gap from beginning of line transect (cm)Distance of end of gap from beginning of line transect (cm)Length of gap (cm) [ End - Start ]Treatment or control [T or C]
Storage Type:string  
float  
string  
date  
string  
float  
float  
float  
string  
Measurement Type:nominalrationominaldateTimenominalratioratiorationominal
Measurement Values Domain:
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeA
DefinitionAeolian site
Source
Code Definition
CodeD
DefinitionDona Ana site
Source
Code Definition
CodeG
DefinitionGravelly Ridges site
Source
Unitnumber
Typenatural
Min
Max
Allowed Values and Definitions
Enumerated Domain 
Code Definition
Code1
DefinitionTransect 1
Source
Code Definition
Code1 Buffer Down
DefinitionTransect 1 downwind buffer
Source
Code Definition
Code1 Buffer Up
DefinitionTransect 1 upwind buffer
Source
Code Definition
Code2
DefinitionTransect 2
Source
Code Definition
Code2 Buffer Down
DefinitionTransect 2 downwind buffer
Source
Code Definition
Code2 Buffer Up
DefinitionTransect 2 upwind buffer
Source
Code Definition
Code3
DefinitionTransect 3
Source
Code Definition
Code3 Buffer Down
DefinitionTransect 3 downwind buffer
Source
Code Definition
Code3 Buffer Up
DefinitionTransect 3 upwind buffer
Source
Code Definition
Code4
DefinitionTransect 4
Source
Code Definition
Code4 Buffer Down
DefinitionTransect 4 downwind buffer
Source
Code Definition
Code4 Buffer Up
DefinitionTransect 4 upwind buffer
Source
FormatYYYY-MM-DD
Precision
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeC
DefinitionCanopy gap
Source
Code Definition
CodeB
DefinitionBasal gap
Source
Unitcentimeter
Typewhole
Min
Max2373 
Unitcentimeter
Typewhole
Min
Max2400 
Unitcentimeter
Typereal
Min20 
Max800 
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeT
DefinitionTreatment plot with conmods
Source
Code Definition
CodeC
DefinitionControl plot without conmods
Source
Missing Value Code:              
CodeNA
ExplMissing data
 
Accuracy Report:                  
Accuracy Assessment:                  
Coverage:                  
Methods:                  

Non-Categorized Data Resource

Name:Comment history for Conmod Pilot data
Entity Type:unknown
Description:Comment history for Conmod Pilot data
Physical Structure Description:
Object Name:Connectivity-pilot_his.txt
Size:23208 bytes
Authentication:c4c391571a142ef6b942a7874905325d Calculated By MD5
Externally Defined Format:
Format Name:unknown
Data:https://pasta-s.lternet.edu/package/data/eml/knb-lter-jrn/210308001/2/cab4a220d2f45562187855ceeb49c4c3

Non-Categorized Data Resource

Name:Treatment and measurement design schematic for Conmod Pilot sites
Entity Type:unknown
Description:Treatment and measurement design schematic for Conmod Pilot sites
Physical Structure Description:
Object Name:Connectivity_Study_Design_Schematic.pdf
Size:54627 bytes
Authentication:3fe3019ce820be067c79329dffb1a1bc Calculated By MD5
Externally Defined Format:
Format Name:unknown
Data:https://pasta-s.lternet.edu/package/data/eml/knb-lter-jrn/210308001/2/71a5d6d6c2fb49407820c0ba0fb2b654

Data Package Usage Rights

This information is released under the Creative Commons license - Attribution - CC BY (https://creativecommons.org/licenses/by/4.0/). The consumer of these data ("Data User" herein) is required to cite it appropriately in any publication that results from its use. The Data User should realize that these data may be actively used by others for ongoing research and that coordination may be necessary to prevent duplicate publication. The Data User is urged to contact the authors of these data if any questions about methodology or results occur. Where appropriate, the Data User is encouraged to consider collaboration or co-authorship with the authors. The Data User should realize that misinterpretation of data may occur if used out of context of the original study. While substantial efforts are made to ensure the accuracy of data and associated documentation, complete accuracy of data sets cannot be guaranteed. All data are made available "as is." The Data User should be aware, however, that data are updated periodically and it is the responsibility of the Data User to check for new versions of the data. The data authors and the repository where these data were obtained shall not be liable for damages resulting from any use or misinterpretation of the data. Thank you.

Keywords

By Thesaurus:
LTER Controlled Vocabularycanopy cover, land surface properties, plant cover, canopy gaps, vegetation, transects, wind, deserts
JRN Dataset KeywordsVegetation Dynamics, LTER V, Management Practices
Jornada Project NamesConmod, study 308
Jornada Place NamesGravelly Ridges, Aeolian, Dona Ana
LTER Core AreaDisturbance, Land Use and Land Cover Change
(No thesaurus)line intercept, gap intercept

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

Methods and protocols used in the collection of this data package
Description:

Connectivity Modifier (Conmod) Pilot methods

For the data table in this data package, canopy and basal gap sizes between vegetation were measured using the gap intercept method described by Herrick et al. (2005). Archived and updated versions of this document are available at https://www.landscapetoolbox.org/manuals/ . Observations impacting the quality of these measurements are recorded in the history file. A schematic of how the gap intercept transects were arranged with respect to the study plots is also included in the data package. Both of these documents are listed in the "Additional documents" section below)

Basic Study Set Up and Location

There are 3 sites for the Conmod Pilot study: Gravelly Ridges, Aeolian, and Dona Ana (referred to as G, A, and D, respectively). Within each site, there are 8 plots. The plots are 8 x 8 meters and have an 8 x 8 meter buffer zone on both sides of the plot (upwind and downwind). At each site, 4 of the 8 plots are treatment plots where connectivity modules (conmods) have been installed to decrease the gap size between perennial vegetation. The other 4 plots are untreated controls. Buffer zones do not have conmods installed.

Four parallel gap intercept transects (numbered 1-4) were established at each plot in 2008. These transects were laid out across the upwind buffer (8 m), the plot (8 m), and the downwind buffer (8 m) for a total distance of 24 meters each. The 4 parallel transects were spaced evenly across each plot at 0.8, 2.8, 4.3, and 7.2 meter intervals. Along each transect, vegetation cover at the canopy and basal, or ground, levels were measured using the gap intercept method. Canopy and basal transects are denoted as C and B types in the data table, respectively. Gaps along each transect are recorded with their start point, end point, and total size in centimeters (end - start). Gaps smaller than 20cm in length were ignored. These measurements were made annually during the summer in 2008-2010, and again in 2012 and 2016.

Treatment plots by site

Aeolian site: 1,3,6,7 (Control plots are 2,4,5,8)

Dona Ana site: 1,3,6,8 (Control plots are 2,4,5,7)

Gravelly Ridges site: 2,4,6,8 (Control plots are 1,3,5,7)

Additional documents

A schematic of the gap intercept transects (though only 3 are shown) are found in "Connectivity_Study_Design_Schematic.pdf"

Historical and contextual notes about data collection (and the "comments" column) are found in the file "Connectivity-pilot_his.txt"

References

Herrick, J. E., J. W. Van Zee, K. M. Havstad, L. M. Burkett, and W. G. Whitford. "Monitoring manual for grassland, shrubland and savanna ecosystems, Volume I." US Department of Agriculture-Agriculture Research Service, Jornada Experimental Range, Las Cruces, New Mexico (2005).

People and Organizations

Creators:
Individual: Gregory S Okin
Organization:University of California Los Angeles
Id:https://orcid.org/0000-0002-0484-3537
Individual: Debra Peters
Organization:USDA-ARS Jornada Experimental Range
Id:https://orcid.org/0000-0002-5842-8099
Individual: Jeff Herrick
Organization:USDA-ARS Jornada Experimental Range
Contacts:
Individual: Debra Peters
Organization:USDA-ARS Jornada Experimental Range
Id:https://orcid.org/0000-0002-5842-8099
Individual: Data Manager
Organization:Jornada Basin LTER
Email Address:
datamanager.jrn.lter@gmail.com

Temporal, Geographic and Taxonomic Coverage

Temporal, Geographic and/or Taxonomic information that applies to all data in this dataset:

Time Period
Begin:
2008-06-10
End:
2016-11-02
Geographic Region:
Description:A (Aeolian) collectors located in the Basin Floor. Contact the data manager for more precise study coordinates.
Bounding Coordinates:
Northern:  32.7494871013Southern:  32.4731725883
Western:  -106.87288312Eastern:  -106.692716261
Geographic Region:
Description:G (Gravelly ridges) collectors located in East Bajada. Contact the data manager for more precise study coordinates.
Bounding Coordinates:
Northern:  32.68957116Southern:  32.53118449
Western:  -106.6846111Eastern:  -106.5903632
Geographic Region:
Description:D (Dona Ana) collectors located in the West Bajada. Contact the data manager for more precise study coordinates.
Bounding Coordinates:
Northern:  32.5427713Southern:  32.46722784
Western:  -106.8514602Eastern:  -106.7294433

Project

Parent Project Information:

Title:Jornada Basin LTER
Personnel:
Individual: Debra Peters
Organization:USDA-ARS Jornada Experimental Range
Id:https://orcid.org/0000-0002-5842-8099
Role:Principal Investigator
Funding: NSF: DEB-1832194

Maintenance

Maintenance:
Description:Data collected annually 2008-2010, 2012 and 2016. The Conmod Pilot project is now completed.
Frequency:

Additional Info

Additional Information:
 

There are 3 site locations:  Aeolian, Dona Ana, Gravelly Ridges.  The UTM coordinates below are approximate, and based on the UAV photo coverage we have for each site.

Precise GPS coordinates are available.

Dona Ana.  These are located north of Herrick’s SD97C (Surface Disturbance) exclosure, which is north of the Dona Ana exclosure, which is in the SW corner of JER Pasture 6.

   DA1     334992.42476300000      3596630.43159000000    DA2     334992.42675400000      3596112.28705000000    DA3     335490.35961900000      3596112.30170000000    DA4     335490.36881400000      3596630.40896000000

Aeolian. These are located just east of the gas pipeline, near the scrape site.

   AE1     334253.41442800000      3606226.21293000000    AE2     333263.17702400000      3606226.21887000000    AE3     333263.16474900000      3605411.37177000000    AE4     334253.40961100000      3605411.35650000000

Gravelly Ridges.  These are located south of the SE corner of the Gravelly Ridges exclosure, north of the road to NASA.  All are outside of the exclosure.

   GR1     350381.01412200000      3604795.02860000000    GR2     349883.09428900000      3604795.02926000000    GR3     349883.11877100000      3604276.88904000000    GR4     350381.05237400000      3604276.87003000000

Other Metadata

EDI is a collaboration between the University of New Mexico and the University of Wisconsin – Madison, Center for Limnology:

UNM logo UW-M logo