Data Package Metadata   View Summary

Biodiversity and metacommunity structure of rocky intertidal invertebrates in some coastal ecosystems in Puerto Rico

General Information
Data Package:
Local Identifier:knb-lter-luq.188.87
Title:Biodiversity and metacommunity structure of rocky intertidal invertebrates in some coastal ecosystems in Puerto Rico
Alternate Identifier:DOI PLACE HOLDER
Abstract:

The goals of this study were to determine the relative importance of environmental (wave power density, wave height) and habitat (e.g., algal cover, slope, complexity of rock surfaces) factors associated with the structure of local assemblages at multiple shore heights and the regional metacommunity of mobile invertebrates on oceanic rocky intertidal habitats. These characteristics and abundances of 41 species of invertebrate were estimated at 10 plots at each of three tidal heights at each of ten sites on the shoreline of Puerto Rico.

Publication Date:2015-04-28
Language:English

Time Period
Begin:
2009-06-30
End:
2009-07-10

People and Organizations
Contact:Bloch, Christopher P. (Bridgewater State College) [  email ]
Creator:Bloch, Christopher P. (Bridgewater State College)
Associate:Klingbeil, Brian (University of Connecticut, associated researcher)

Data Entities
Data Table Name:
Intertidal invertebrates in some coastal ecosystems of Puerto Rico
Description:
Count and identification of all mobile animals visible to the naked eye Between 30 June and 10 July, 2009, on three transects of 50 m length from each site.
Detailed Metadata

Data Entities


Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/knb-lter-luq/188/87/82dff4ed8187ff8f14c61aafad352491
Name:Intertidal invertebrates in some coastal ecosystems of Puerto Rico
Description:Count and identification of all mobile animals visible to the naked eye Between 30 June and 10 July, 2009, on three transects of 50 m length from each site.
Number of Records:300
Number of Columns:57

Time Period
Begin:
2009-06-30
End:
2009-07-10

Table Structure
Object Name:IntertidalInvertebrates.csv
Size:39959
Text Format:
Number of Header Lines:1
Number of Foot Lines:0
Record Delimiter:\r\n
Orientation:column
Simple Delimited:
Field Delimiter:,

Table Column Descriptions
 Sample DateIntertidal invertebrates study coastal sites in Puerto RicoZone of TransectQuadrat numberSlopeHits of musselsHits of tube wormsHits of barnacle spatHits of spongesHits of coralHits of algaeAbundance of Acanthopleura granulataAbundance of Chiton squamosusAbundance of unidentied chitonsAbundance of Lottia antillarumAbundance of Eoacmaea pustulataAbundance of Fissurella barbadensisAbundance of Fissurella nodosaAbundance of unidentified Fissurella speciesAbundance of Hemitoma octoradiataAbundance of Lucapina sowerbiiAbundance of Echinolittorina meleagrisAbundance of Echinolittorina mespillumAbundance of Echinolittorina species 1Abundance of Echinolittorina species 5Abundance of Echinolittorina tuberculataAbundance of Cenchritis muricatusAbundance of Nerita fulguransAbundance of Nerita pelorontaAbundance of Nerita tessellataAbundance of Nerita versicolorAbundance of Puperita pupaAbundance of Puperita tristisAbundance of Cittarium picaAbundance of Columbella mercatoriaAbundance of Buccinid species 1Abundance of Epitonium albidumAbundance of Leucozonia species 1Abundance of Lithopoma tuberAbundance of Mitrella ocellataAbundance of Rhombinella laevigataAbundance of Supplanaxis nucleusAbundance of Plicopurpura patulaAbundance of Vexillum puellaAbundance of Tegula excavataAbundance of Vasula deltoideaAbundance of Stramonita rusticaAbundance of Echinometra lucunterAbundance of Holothuria glaberrimaAbundance of Clibanarius tricolorAbundance of Calcinus tibicenAbundance of Pachygrapsus transversusAbundance of Microphrys bicornutusAbundance of unidentified limpetAbundance of unidentified gastropodAbundance of unidentified hermit crabAbundance of unidentified crab
Column Name:Sample_Date  
Site  
Zone  
Quad  
Slope  
Mussels  
Tube_worms  
Barnacle_spat  
Sponges  
Coral  
Algae  
ACAGRA  
CHISQU  
UNK_CHITON  
LOTANT  
EOAPUS  
FISBAR  
FISNOD  
FISSP3  
HEMOCT  
LUCSOW  
ECHMEL  
ECHMES  
ECHSP1  
ECHSP5  
ECHTUB  
CENMUR  
NERFUL  
NERPEL  
NERTES  
NERVER  
PUPPUP  
PUPTRI  
CITPIC  
COLMER  
BUCSP1  
EPIALB  
LEUSP1  
LITTUB  
MITOCE  
RHOLAE  
SUPNUC  
PLIPAT  
VEXPUE  
TEGEXC  
VASDEL  
STRRUS  
ECHLUC  
HOLGLA  
CLITRI  
CALTIB  
PACTRA  
MICBIC  
UNK_limpet  
UNK_snail  
UNK_hcrab  
UNK_crab  
Definition:Date when the sample was collectedItertidal invertebrates biodiversity and metacommunity sites in some coasts of Puerto RFicoLocation of transect (H=upper intertidal zone; M=middle intertidal zone; L=lower intertidal zone)Number indicating the relative location of sampling plots along a 50-m transectSlope of the rock surface; measured at the lower left corner of the plot when facing inland. A positive value indicates sloping downward toward the water; a negative value indicates sloping downward away from the water.Number of intersections of grid lines at which mussels occurredNumber of intersections of grid lines at which tube worm burrows occurredNumber of intersections of grid lines at which barnacles occurredNumber of intersections of grid lines at which sponges occurredNumber of intersections of grid lines at which live corals occurredNumber of intersections of grid lines at which live algae occurredNumber of individuals of Acanthopleura granulata observedNumber of individuals of Chiton squamosus observedNumber of individuals of unidentied chitons observedNumber of individuals of Lottia antillarum observedNumber of individuals of Eoacmaea pustulata observedNumber of individuals of Fissurella barbadensis observedNumber of individuals of Fissurella nodosa observedNumber of individuals of unidentified Fissurella species observedNumber of individuals of Hemitoma octoradiata observedNumber of individuals of Lucapina sowerbii observedNumber of individuals of Echinolittorina meleagris observedNumber of individuals of Echinolittorina mespillum observedNumber of individuals of Echinolittorina ziczac observedNumber of individuals of Echinolittorina species 5 observedNumber of individuals of Echinolittorina tuberculata observedNumber of individuals of Cenchritis muricatus observedNumber of individuals of Nerita fulgurans observedNumber of individuals of Nerita peloronta observedNumber of individuals of Nerita tessellata observedNumber of individuals of Nerita versicolor observedNumber of individuals of Puperita pupa observedNumber of individuals of Puperita tristis observedNumber of individuals of Cittarium pica observedNumber of individuals of Columbella mercatoria observedNumber of individuals of Buccinid species 1 observedNumber of individuals of Epitonium albidum observedNumber of individuals of Leucozonia species 1 observedNumber of individuals of Lithopoma tuber observedNumber of individuals of Mitrella ocellata observedNumber of individuals of Rhombinella laevigata observedNumber of individuals of Supplanaxis nucleus observedNumber of individuals of Plicopurpura patula observedNumber of individuals of Vexillum puella observedNumber of individuals of Tegula excavata observedNumber of individuals of Vasula deltoidea observedNumber of individuals of Stramonita rustica observedNumber of individuals of Echinometra lucunter observedNumber of individuals of Holothuria glaberrima observedNumber of individuals of Clibanarius tricolor observedNumber of individuals of Calcinus tibicen observedNumber of individuals of Pachygrapsus transversus observedNumber of individuals of Microphrys bicornutus observedNumber of individuals of unidentified limpets observedNumber of individuals of unidentified gastropods observedNumber of individuals of unidentified hermit crabs observedNumber of individuals of unidentified crabs observed
Storage Type:date  
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Measurement Type:dateTimenominalnominalratiorationominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominalnominal
Measurement Values Domain:
FormatDD/MM/YYYY
Precision
Allowed Values and Definitions
Enumerated Domain 
Code Definition
CodeAguada
DefinitionAguada intertidal invertebrates biodiversity and metacommunity site
Source
Code Definition
CodeFajardo
DefinitionFajardo intertidal invertebrates biodiversity and metacommunity site
Source
Code Definition
CodeGuánica
DefinitionGuánica intertidal invertebrates biodiversity and metacommunity site
Source
Code Definition
CodeGuayanes
DefinitionGuayanes Yabucoa intertidal invertebrates biodiversity and metacommunity site
Source
Code Definition
CodeHatillo
DefinitionHatillo intertidal invertebrates biodiversity and metacommunity site
Source
Code Definition
CodeIsabela
DefinitionIsabela intertidal invertebrates biodiversity and metacommunity site
Source
Code Definition
CodePiñones
DefinitionPiñones Loiza intertidal invertebrates biodiversity and metacommunity site
Source
Code Definition
CodePunta Caracoles
DefinitionPunta Caracoles Arecibo intertidal invertebrates biodiversity and metacommunity site
Source
Code Definition
CodeRincón
DefinitionRincón intertidal invertebrates biodiversity and metacommunity site
Source
Code Definition
CodeVega Baja
DefinitionVega Baja intertidal invertebrates biodiversity and metacommunity site
Source
DefinitionLocation of transect (H=upper intertidal zone; M=middle intertidal zone; L=lower intertidal zone)
Unitmeters
Typereal
Unitdegrees
Typereal
DefinitionNumber of intersections of grid lines at which mussels occurred
DefinitionNumber of intersections of grid lines at which tube worm burrows occurred
DefinitionNumber of intersections of grid lines at which barnacles occurred
DefinitionNumber of intersections of grid lines at which sponges occurred
DefinitionNumber of intersections of grid lines at which live corals occurred
DefinitionNumber of intersections of grid lines at which live algae occurred
DefinitionNumber of individuals of Acanthopleura granulata observed
DefinitionNumber of individuals of Chiton squamosus observed
DefinitionNumber of individuals of unidentied chitons observed
DefinitionNumber of individuals of Lottia antillarum observed
DefinitionNumber of individuals of Eoacmaea pustulata observed
DefinitionNumber of individuals of Fissurella barbadensis observed
DefinitionNumber of individuals of Fissurella nodosa observed
DefinitionNumber of individuals of unidentified Fissurella species observed
DefinitionNumber of individuals of Hemitoma octoradiata observed
DefinitionNumber of individuals of Lucapina sowerbii observed
DefinitionNumber of individuals of Echinolittorina meleagris observed
DefinitionNumber of individuals of Echinolittorina mespillum observed
DefinitionNumber of individuals of Echinolittorina ziczac observed
DefinitionNumber of individuals of Echinolittorina species 5 observed
DefinitionNumber of individuals of Echinolittorina tuberculata observed
DefinitionNumber of individuals of Cenchritis muricatus observed
DefinitionNumber of individuals of Nerita fulgurans observed
DefinitionNumber of individuals of Nerita peloronta observed
DefinitionNumber of individuals of Nerita tessellata observed
DefinitionNumber of individuals of Nerita versicolor observed
DefinitionNumber of individuals of Puperita pupa observed
DefinitionNumber of individuals of Puperita tristis observed
DefinitionNumber of individuals of Cittarium pica observed
DefinitionNumber of individuals of Columbella mercatoria observed
DefinitionNumber of individuals of Buccinid species 1 observed
DefinitionNumber of individuals of Epitonium albidum observed
DefinitionNumber of individuals of Leucozonia species 1 observed
DefinitionNumber of individuals of Lithopoma tuber observed
DefinitionNumber of individuals of Mitrella ocellata observed
DefinitionNumber of individuals of Rhombinella laevigata observed
DefinitionNumber of individuals of Supplanaxis nucleus observed
DefinitionNumber of individuals of Plicopurpura patula observed
DefinitionNumber of individuals of Vexillum puella observed
DefinitionNumber of individuals of Tegula excavata observed
DefinitionNumber of individuals of Vasula deltoidea observed
DefinitionNumber of individuals of Stramonita rustica observed
DefinitionNumber of individuals of Echinometra lucunter observed
DefinitionNumber of individuals of Holothuria glaberrima observed
DefinitionNumber of individuals of Clibanarius tricolor observed
DefinitionNumber of individuals of Calcinus tibicen observed
DefinitionNumber of individuals of Pachygrapsus transversus observed
DefinitionNumber of individuals of Microphrys bicornutus observed
DefinitionNumber of individuals of unidentified limpets observed
DefinitionNumber of individuals of unidentified gastropods observed
DefinitionNumber of individuals of unidentified hermit crabs observed
DefinitionNumber of individuals of unidentified crabs observed
Missing Value Code:                                                                                                                  
Accuracy Report:                                                                                                                  
Accuracy Assessment:                                                                                                                  
Coverage:                                                                                                                  
Methods:                                                                                                                  

Data Package Usage Rights

Data Policies

LTER Network Data Access Policy, Data Access Requirements, and General Data Use Agreement
approved by the LTER Coordinating Committee April 6, 2005

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The LTER data policy includes three specific sections designed to express shared network policies regarding the release of LTER data products, user registration for accessing data, and the licensing agreements specifying the conditions for data use.

LTER Network Data Release Policy

Data and information derived from publicly funded research in the U.S. LTER Network, totally or partially from LTER funds from NSF, Institutional Cost-Share, or Partner Agency or Institution where a formal memorandum of understanding with LTER has been established, are made available online with as few restrictions as possible, on a nondiscriminatory basis. LTER Network scientists should make every effort to release data in a timely fashion and with attention to accurate and complete metadata.

Data[current-user:created]

There are two data types:

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The consumer of these data (“Data User” herein) has an ethical obligation to cite it appropriately in any publication that results from its use. The Data User should realize that these data may be actively used by others for ongoing research and that coordination may be necessary to prevent duplicate publication. The Data User is urged to contact the authors of these data if any questions about methodology or results occur. Where appropriate, the Data User is encouraged to consider collaboration or coauthorship with the authors. The Data User should realize that misinterpretation of data may occur if used out of context of the original study. While substantial efforts are made to ensure the accuracy of data and associated documentation, complete accuracy of data sets cannot be guaranteed. All data are made available “as is.” The Data User should be aware, however, that data are updated periodically and it is the responsibility of the Data User to check for new versions of the data. The data authors and the repository where these data were obtained shall not be liable for damages resulting from any use or misinterpretation of the data. Thank you.
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While substantial efforts are made to ensure the accuracy of data and documentation contained in this Data Set, complete accuracy of data and metadata cannot be guaranteed. All data and metadata are made available "as is". The Data User holds all parties involved in the production or distribution of the Data Set harmless for damages resulting from its use or interpretation.[current-user:name]

Keywords

By Thesaurus:
Core Areaspopulations
LTER Controlled Vocabularybiodiversity, intertidal, biodiversity, community structure

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

Methods and protocols used in the collection of this data package
Description:

Between 30 June and 10 July, 2009, three transects of 50 m length were established at each site, spaced equally between the level of mean high tide and the water level at mean low tide. Hereafter, we refer to these as the upper, middle, and lower intertidal transects. The slopes of the beaches and the degree of wave exposure differed considerably among sites; nevertheless, locations of the transects corresponded well to basic habitat characteristics. The upper transect was generally characterized by bare rock with little or no algal cover, the middle transect by occasional tidal pools and patches of crustose or turf-forming algae, and the lower transect by extensive algal colonies, including complex macrophytes. A random number generator was used to place 10 square quadrats (area = 0.25 m2) at random locations along each transect. Within each quadrat, all mobile animals visible to the naked eye were counted and identified. In practice, this included mollusks, arthropods, and echinoderms. Sampling occurred at low tide during daylight hours, to facilitate visual searches. A grid was overlaid over each quadrat, and algal cover was estimated as the number of intersections of grid lines (out of a possible 64) at which algae occurred. Slope of the rock face was estimated at the lower left corner of each quadrat (while facing inland). Each quadrat was digitally photographed. After the completion of sampling, these photographs were used to categorize complexity of rock surfaces (hereafter, surface complexity) of each quadrat. Classification was qualitative and reflected the degree of departure from a homogeneous rock surface on a scale of 1 (indicating a nearly uniform, flat surface) to 5 (indicating extreme complexity of rock structure, including the presence of both pits and crevices). The geographic location of each site was determined by a handheld GPS unit.

Instrument(s):GPS unit

People and Organizations

Creators:
Individual: Christopher P. Bloch
Organization:Bridgewater State College
Address:
Bridgewater State College Department of Biological Sciences,
Bridgewater, MA 2325 US
Phone:
(508) 531-2087 (voice)
Phone:
(508) 531-1785 (facsimile)
Email Address:
cbloch@bridgew.edu
Contacts:
Individual: Christopher P. Bloch
Organization:Bridgewater State College
Address:
Bridgewater State College Department of Biological Sciences,
Bridgewater, MA 2325 US
Phone:
(508) 531-2087 (voice)
Phone:
(508) 531-1785 (facsimile)
Email Address:
cbloch@bridgew.edu
Associated Parties:
Individual: Brian Klingbeil
Organization:University of Connecticut
Address:
3107 Horsebarn Hill Road; Building 4 Annex,
Storrs, CT 6269 US
Phone:
(860) 486-1772 (voice)
Phone:
(860) 486-6364 (facsimile)
Email Address:
brian.klingbeil@uconn.edu
Role:associated researcher
Metadata Providers:
Individual: Christopher P. Bloch
Organization:Bridgewater State College
Address:
Bridgewater State College Department of Biological Sciences,
Bridgewater, MA 2325 US
Phone:
(508) 531-2087 (voice)
Phone:
(508) 531-1785 (facsimile)
Email Address:
cbloch@bridgew.edu

Temporal, Geographic and Taxonomic Coverage

Temporal, Geographic and/or Taxonomic information that applies to all data in this dataset:

Time Period
Begin:
2009-06-30
End:
2009-07-10
Sampling Site: 
Description:Calle 2 Hatillo; 00659; Puerto Rico ‎ 195 m SE
Site Coordinates:
Longitude (degree): -66.7898Latitude (degree): 18.4927
Altitude (meter):0
Sampling Site: 
Description:Cabeza Chiquita; Unnamed Rd Fajardo 00738; Puerto Rico 1.1 km SW
Site Coordinates:
Longitude (degree): -65.6429Latitude (degree): 18.3799
Altitude (meter):0
Sampling Site: 
Description:PR-333; Yauco; Guayanilla 00698; Puerto Rico 518 m E
Site Coordinates:
Longitude (degree): -66.8424Latitude (degree): 17.9507
Altitude (meter):5
Sampling Site: 
Description:Puerto Rico 906; Yabucoa; 00767; Puerto Rico 350 m NW
Site Coordinates:
Longitude (degree): -65.8142Latitude (degree): 18.0605
Altitude (meter):26
Sampling Site: 
Description:Calle 2 Hatillo; 00659; Puerto Rico ? 195 m SE
Site Coordinates:
Longitude (degree): -66.7898Latitude (degree): 18.4927
Altitude (meter):3
Sampling Site: 
Description:Puerto Rico 466 Isabela; 00662; Puerto Rico 140 m S
Site Coordinates:
Longitude (degree): -67.0386Latitude (degree): 18.5129
Altitude (meter):0
Sampling Site: 
Description:Bicycle Route 1 Carolina; Loíza 00983; Puerto Rico ‎ 83 m SE
Site Coordinates:
Longitude (degree): -65.9899Latitude (degree): 18.4598
Altitude (meter):0
Sampling Site: 
Description:Puerto Rico 681 Arecibo; 00612; Puerto Rico ‎ 113 m S
Site Coordinates:
Longitude (degree): -66.642Latitude (degree): 18.4916
Altitude (meter):6
Sampling Site: 
Description:Puerto Rico 413 Aguada; Rincón 00602; Puerto Rico ‎ 312 m N
Site Coordinates:
Longitude (degree): -67.2647Latitude (degree): 18.3498
Altitude (meter):25
Sampling Site: 
Description:Puerto Rico 692 Vega Baja; 00693; Puerto Rico 64 m W
Site Coordinates:
Longitude (degree): -66.3951Latitude (degree): 18.4902
Altitude (meter):0

Temporal, Geographic and/or Taxonomic information that applies to Data Table: Intertidal invertebrates in some coastal ecosystems of Puerto Rico


Time Period
Begin:
2009-06-30
End:
2009-07-10

Project

Other Metadata

Additional Metadata

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