Data Package Metadata   View Summary

SBC LTER: Beach: Distribution of terrestrial organic material in intertidal and nearshore marine sediment due to debris flow response efforts

General Information
Data Package:
Local Identifier:knb-lter-sbc.151.1
Title:SBC LTER: Beach: Distribution of terrestrial organic material in intertidal and nearshore marine sediment due to debris flow response efforts
Alternate Identifier:DOI PLACE HOLDER
Abstract:

These data describe the distribution and processing of terrestrial organic material observed in the Santa Barbara Channel (Goleta Bay) during the spring of 2018. Specifically, beach, slough, and marine sediments were sampled during and after the debris disposal event that took place between January and February 2018 following the Thomas Fire and the subsequent Montecito Debris Flow. Data are contained in one table, including organic carbon, carbon isotope, lignin phenol, and pyrogenic carbon measurements analyzed from sediment cores collected at different depths and locations in the nearshore region.

Short Name:Organic materials in debris flow
Publication Date:2022-06-21
Language:English
For more information:
Visit: https://sbclter.msi.ucsb.edu/
Visit: DOI PLACE HOLDER

Time Period
Begin:
2018-02-02
End:
2018-04-24

People and Organizations
Contact:Information Manager, Santa Barbara Coastal LTER [  email ]
Organization:Santa Barbara Coastal LTER
Creator:Lowman, Heili 
Creator:Moingt, Matthieu 
Creator:Zimmerman, Andrew 
Creator:Dugan, Jenifer E 
Creator:Melack, John M 

Data Entities
Data Table Name:
Terrestrial organic matter analyses
Description:
Measurements of carbon isotopes, organic carbon content, pyrogenic carbon content, and lignin phenols in sediment samples
Detailed Metadata

Data Entities


Data Table

Data:https://pasta-s.lternet.edu/package/data/eml/knb-lter-sbc/151/1/7ebb0c31cc747850ec862610935b3cd7
Name:Terrestrial organic matter analyses
Description:Measurements of carbon isotopes, organic carbon content, pyrogenic carbon content, and lignin phenols in sediment samples
Number of Records:40
Number of Columns:21

Table Structure
Object Name:lignin_pyc_061922.csv
Size:4684 byte
Authentication:2b86439b9c602ea2ac93f9e263c647d7 Calculated By MD5
Text Format:
Number of Header Lines:1
Record Delimiter:\r\n
Orientation:column
Simple Delimited: no
Field Delimiter:,

Table Column Descriptions
 DateLocationLocation idReplicate idWater DepthSection of CoreC13 contentOC contentPyrogenic C contentlambdasigma 8syringylvanillylcinnamylp-hydroxylsyringyl/vanillylcinnamyl/vanillylp-hydroxyl/(syringyl + vanillyl)3,5 dihydroxybenzoic acid/vanillylacid/aldehyde syringylacid/aldehyde vanillyl
Column Name:Collection_Date  
Location  
Location_id  
Replicate_id  
Water_Depth  
Core_Section  
d13C  
perc_OC  
pyC  
Lambda  
Sigma8  
S  
V  
C  
P  
SV  
CV  
PVS  
BdV  
AdAds  
AcAdv  
Definition:Sampling date formatted as MM/DD/YYYYSampling locationAbbreviated sampling locationNumber of replicate sediment coreWater depth at sampling locationSection of sediment core (0-10 cm or 10-20cm)del C-13 is the ratio of C13 enrichment relative to a standard, multiplied by 1000Percent organic carbon in the samplePercent pyrogenic carbon in the sampleSum of vanillyl, syringyl, and cinnamyl phenols (mg/100 mg OC)Sum of vanillyl, syringyl, and cinnamyl phenols (mg/10g sample)Sum of 3 syringyl lignin phenols, derived from woody angiosperms (mg/100 mg OC)Sum of 3 vanillyl lignin phenols, derived from woody gymnosperms (mg/100 mg OC)Sum of 2 cinnamyl lignin phenols, derived from non-woody material (mg/100 mg OC)Sum of 3 p-hydroxyl phenols, derived from lignin (mg/100 mg OC)Weight ratio of S/V phenolsWeight ratio of C/V phenolsWeight ratio of P to the sum of S & V phenolsWeight ratio of 3,5 dihydroxybenzoic acid to V phenolsWeight ratio of acid to aldehyde of S phenolsWeight ratio of acid to aldehyde of V phenols
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Measurement Type:dateTimenominalnominalnominalrationominalratioratioratioratioratioratioratioratioratioratioratioratioratioratioratio
Measurement Values Domain:
FormatMM/DD/YYYY
Precision1
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Typeinteger
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Typereal
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Accuracy Report:                                          
Accuracy Assessment:                                          
Coverage:                                          
Methods:                                          

Data Package Usage Rights

This data package is released under the Creative Commons License Attribution 4.0 International (CC BY 4.0, see https://creativecommons.org/licenses/by/4.0/). This license states that consumers ("Data Users" herein) may distribute, adapt, reuse, remix, and build upon this work, as long as they give appropriate credit, provide a link to the license, and indicate if changes were made. If redistributed, a Data User may not apply additional restrictions or technological measures that prevent access.

The Data User has an ethical obligation to cite the data source appropriately in any publication or product that results from its use, and notify the data contact or creator. Communication, collaboration, or co-authorship (as appropriate) with the creators of this data package is encouraged to prevent duplicate research or publication. The Data User is urged to contact the authors of these data if any questions about methodology or results occur. The Data User should realize that these data may be actively used by others for ongoing research and that coordination may be necessary to prevent duplication or inappropriate use. The Data User should realize that misinterpretation may occur if data are used outside of the context of the original study. The Data User should be aware that data are updated periodically and it is the responsibility of the Data User to check for new versions of the data.

While substantial efforts are made to ensure the accuracy of data and associated documentation, complete accuracy of data sets cannot be guaranteed. This data package (with its components) is made available “as is” and with no warranty of accuracy or fitness for use. The creators of this data package and the repository where these data were obtained shall not be liable for any damages resulting from misinterpretation, use or misuse of the data package or its components.

Keywords

By Thesaurus:
LTER Controlled Vocabulary v1long term ecological research, LTER
SBC-LTER Controlled VocabularyBeach, Ecosystem Processes, Kelp Forest, nearshore ocean, Reef
Santa Barbara Coastal LTER PlacesGoleta Bay Reef
Global Change Master Directory (GCMD) v6.0.0.0.0Carbon
Knowledge Network for BiocomplexityCarbon
NBII BiocomplexityCarbon
noneDebris, lignin, LTER, nearshore processes, Particular Organic Matter, Pyrogenic Carbon, Santa Barbara Channel, Sediment, Terrestrial Organic Matter

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

Methods and protocols used in the collection of this data package
Description:

Intertidal samples were collected on an alongshore transect at increasing distances (650 m, 950 m) from the original disposal site on the west end of the beach. For intertidal sampling, four replicate sediment cores were collected using 5 x 20 cm hand corers, stoppered on either end, placed in a cooler on ice, and transported immediately back to the laboratory at the University of California Santa Barbara (UCSB). Subtidal marine sediment samples were collected along two longitudinal transects, at 5 m, 10 m, and 20 m water depths perpendicularly offshore of the disposal site in west Goleta Bay and at 10 m and 20 m water depths offshore of the mouth of Goleta Slough in east Goleta Bay. At each subtidal location, four replicate sediment cores were collected by SCUBA divers using the same 5 x 20 cm hand corers, stoppered on either end, and transported back to the laboratory in a cooler on ice. All samples were stored frozen (-20°C) until sample processing. Intertidal cores were stored intact, since their size varied between 10 and 20 cm, and all subtidal cores were sectioned into 0-10 cm and 10-20 cm horizons prior to freezing.

To prepare samples for analyses, two replicate cores from each site were selected, thawed, and 100 g of sediment from each core was weighed into clean aluminum tins. Samples were dried at 60°C for 48 hours, ground by hand using a mortar and pestle, and passed through a 2 mm sieve prior to being placed into combusted glass vials with a Teflon cap for storage.

Measurement of bulk stable organic carbon isotope signatures was done at the Department of Geological Sciences, University of Florida (UF) following Mays et al. (2017). To remove inorganic C, approximately 200 mg of sediment was weighed into in a container with ~250 ml 1 N HCl. After 48 h, the material was passed through a glass fiber filter with the aid of a vacuum pump. Decarbonated samples were then rinsed with deionized water to remove excess acid and chloride. The remaining sediment was oven-dried, separated from the filter, and stored in 20 mL glass scintillation vials. Ratios of 12C and 13C were then determined on a Thermo Finnigan Delta Plus XL isotope ratio mass spectrometer with a ConFlo III interface linked to a Costech ECS 4010 Elemental Combustion System. Carbon stable isotope results are reported as per mil (‰) in standard delta notation relative to Vienna PeeDee Belemnite (VPDB). Precision for δ13C was ±0.21‰ based on nine analyses of UFCS, an internal laboratory standard. Total organic carbon (TOC) contents of the original sample after HCl acidification and in the digested samples were analyzed in duplicate (or additional times until <5% relative error) on a Carlo-Erba NA-1500 CHS Elemental Analyzer.

Samples were also processed for pyrogenic carbon content using the Kurth-Mackenzie-Deluca method (Kurth et al., 2006), in which 1 g of sample was ground to <0.76 μm, and digested using 20 mL of 30% peroxide (H2O2) and 10 mL of 1M nitric acid (1M HNO3) at 100 °C for 16 h to remove non-charcoal carbon. After cooling and filtering with Whatman #2 filter paper, the sediment-laden filters were dried at 60 oC. Samples were carefully scraped from the filters, weighed, and analyzed for C content. It is assumed that all C that remained was pyrogenic carbon (Kurth et al., 2006). Pyrogenic carbon content (%PyC) was then calculated as the product of the C content in the digested sample and the ratio of pre- to post-digestion weight of the sample.

Lignin phenol analyses were used to determine the presence of terrestrial OM in sediment samples and the extent of diagenetic processing or degradation. A separate subsample from each replicate core was analyzed for lignin content using a modified alkaline cupric (CuO) oxidation method (Goñi and Montgomery, 2000) and a Varian 3800/Saturn 2000TM coupled gas chromatograph – mass spectrometer with a fused capillary column (DB-1 from J&W, 60m, 320µm) housed by Geotop at the Université du Québec à Montréal (UQAM) (Moingt et al., 2016). A standard reference material of estuarine sediment (SAG 05) was analyzed, and results were consistent with previously published values (Louchouarn et al., 2000; Moingt et al., 2016).

References

Goñi, M.A., Montgomery, S., 2000. Alkaline CuO oxidation with a microwave digestion system: Lignin analyses of geochemical samples. Analytical Chemistry 72, 3116–3121. https://doi.org/10.1021/ac991316w

Kurth, V.J., MacKenzie, M.D., DeLuca, T.H., 2006. Estimating charcoal content in forest mineral soils. Geoderma 137, 135–139. https://doi.org/10.1016/j.geoderma.2006.08.003

Louchouarn, P., Opsahl, S., Benner, R., 2000. Isolation and quantification of dissolved lignin from natural waters using solid-phase extraction and GC/MS. Analytical Chemistry 72, 2780–2787. https://doi.org/10.1021/ac9912552

Mays, J.L., Brenner, M., Curtis, J.H., Curtis, K.V., Hodell, D.A., Correa-Metrio, A., Escobar, J., Dutton, A.L., Zimmerman, A.R., Guilderson, T.P., 2017. Stable carbon isotopes (δ13C) of total organic carbon and long-chain n-alkanes as proxies for climate and environmental change in a sediment core from Lake Petén-Itzá, Guatemala. Journal of Paleolimnology 57, 307–319. https://doi.org/10.1007/s10933-017-9949-z

Moingt, M., Lucotte, M., Paquet, S., 2016. Lignin biomarkers signatures of common plants and soils of Eastern Canada. Biogeochemistry 129, 133–148. https://doi.org/10.1007/s10533-016-0223-7

People and Organizations

Publishers:
Organization:Environmental Data Initiative
Email Address:
info@edirepository.org
Web Address:
https://edirepository.org
Id:https://ror.org/0330j0z60
Creators:
Organization:Santa Barbara Coastal LTER
Address:
Marine Science Institute University of California,
Santa Barbara, CA 93106 USA
Email Address:
sbclter@msi.ucsb.edu
Individual: Heili Lowman
Address:
Department of Natural Resources and Environmental Science University of Nevada,
Reno, NV 89557 US
Phone:
Email Address:
hlowman@unr.edu
Individual: Matthieu Moingt
Address:
NA Université du Québec à Montréal,
Montréal, Québec Canada
Email Address:
moingt.matthieu@uqam.ca
Id:https://orcid.org/0000-0002-3889-6995
Individual: Andrew Zimmerman
Address:
Department of Geological Sciences University of Florida,
Gainesville, FL 32611 US
Email Address:
azimmer@ufl.edu
Id:https://orcid.org/0000-0001-5137-4916
Individual: Jenifer E Dugan
Address:
Marine Science Institute University of California,
Santa Barbara, CA 93106-6150 US
Phone:
805-893-2675
Email Address:
j_dugan@lifesci.ucsb.edu
Individual: John M Melack
Address:
Department of Ecology, Evolution and Marine Biology University of California,
Santa Barbara, CA 93106-9620 US
Phone:
805-893-3879
Email Address:
melack@bren.ucsb.edu
Id:https://orcid.org/0000-0003-0619-841X
Contacts:
Position:Information Manager, Santa Barbara Coastal LTER
Address:
Marine Science Institute,
University of California,
Santa Barbara, California 93106-6150 United States
Phone:
805 893 2071 (voice)
Email Address:
sbclter@msi.ucsb.edu
Web Address:
https://sbclter.msi.ucsb.edu/

Temporal, Geographic and Taxonomic Coverage

Temporal, Geographic and/or Taxonomic information that applies to all data in this dataset:

Time Period
Begin:
2018-02-02
End:
2018-04-24
Sampling Site: 
Description:MD: Location of debris deposition on Goleta Beach, during deposition
Site Coordinates:
Longitude (degree): -119.8343795Latitude (degree): 34.4160494
Sampling Site: 
Description:GBEA: Goleta Beach, east of deposition site
Site Coordinates:
Longitude (degree): -119.8284676Latitude (degree): 34.4167935
Sampling Site: 
Description:GOSL: Goleta Slough, intertidal
Site Coordinates:
Longitude (degree): -119.8252275Latitude (degree): 34.4173378
Sampling Site: 
Description:DD: Location of debris deposition on Goleta Beach, after deposition
Site Coordinates:
Longitude (degree): -119.8343795Latitude (degree): 34.4160494
Sampling Site: 
Description:CD: Goleta Beach, low tide line
Site Coordinates:
Longitude (degree): -119.8343795Latitude (degree): 34.4160494
Sampling Site: 
Description:GOBW: Goleta Bay West, 5 m water depth
Site Coordinates:
Longitude (degree): -119.833333Latitude (degree): 34.412
Sampling Site: 
Description:GOBW: Goleta Bay West, 10 m water depth
Site Coordinates:
Longitude (degree): -119.833333Latitude (degree): 34.406667
Sampling Site: 
Description:GOBW: Goleta Bay West, 20 m water depth
Site Coordinates:
Longitude (degree): -119.833333Latitude (degree): 34.402833
Sampling Site: 
Description:GOBE: Goleta Bay East, 10 m water depth
Site Coordinates:
Longitude (degree): -119.824167Latitude (degree): 34.408783
Sampling Site: 
Description:GOBE: Goleta Bay East, 20 m water depth
Site Coordinates:
Longitude (degree): -119.824167Latitude (degree): 34.402917

Project

Parent Project Information:

Title:Santa Barbara Coastal Long Term Ecological Research Project
Personnel:
Individual:Dr. Robert Miller
Address:
Marine Science Institute,
University of California,
Santa Barbara, California 93106-6150 United States
Phone:
805 893 6174 (voice)
Email Address:
miller@msi.ucsb.edu
Role:Principal Investigator
Individual:Dr. Dan Reed
Address:
Marine Science Institute,
University of California,
Santa Barbara, California 93106-6150 United States
Phone:
805 893 8363 (voice)
Email Address:
dan.reed@lifesci.ucsb.edu
Role:Co-principal Investigator
Individual:Dr. Adrian Stier
Address:
Department of Ecology, Evolution and Marine Biology,
University of California,
Santa Barbara, California 93106-9260 United States
Phone:
805 893 5467 (voice)
Email Address:
adrian.stier@lifesci.ucsb.edu
Role:Co-principal Investigator
Individual:Dr. Gretchen Hoffman
Address:
Department of Ecology, Evolution and Marine Biology,
University of California,
Santa Barbara, California 93106-9620 United States
Phone:
805 893 6175 (voice)
Email Address:
hofmann@lifesci.ucsb.edu
Role:Co-principal Investigator
Individual:Dr. David Siegel
Address:
Institute for Computational Earth System Science,
University of California,
Santa Barbara, California 93106-3060 United States
Phone:
805 893 4547 (voice)
Email Address:
davey@icess.ucsb.edu
Role:Co-principal Investigator
Abstract:

The Santa Barbara Coastal LTER (SBC LTER) is an interdisciplinary research and education program established in April 2000 with the goal of developing a predictive understanding of how environmental drivers interact with terrestrial and oceanic processes to alter material flows and influence the ecology of coastal ecosystems. SBC LTER's principal study domain is the semi-arid coast and nearshore waters of the Santa Barbara Channel in southern California, and its diverse and productive marine forests of giant kelp (Macrocystis pyrifera) serve as the focal study ecosystem. Analyses of our long-term data have identified many of the environmental drivers and ecological processes underlying the production and community dynamics of kelp forests. The research proposed to address this question is integrated in a conceptual framework that focuses on the causes and ecological consequences of the dynamics of a relatively short-lived foundation species in a setting of long-term climate change and human use.

Funding:

NSF Award OCE-9982105, OCE-0620276, OCE-1232779, OCE-1831937

Other Metadata

Additional Metadata

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