Data Package Metadata View Summary

Soil fungal community and activity under dominant plant species at the Sevilleta National Wildlife Refuge, New Mexico: October 2013

General Information

Data Package:
Local Identifier:	edi.237.1
Title:	Soil fungal community and activity under dominant plant species at the Sevilleta National Wildlife Refuge, New Mexico: October 2013
Alternate Identifier:	DOI PLACE HOLDER
Abstract:	We measured fungal composition and activity in the soil under dominant plant species across a grassland to shrubland transition to determine if shrubs cultivate soil microbial communities as they encroach grasslands. The project was conducted in the northern Chihuahuan desert at the Sevilleta National Wildlife Refuge (site of the Sevilleta LTER) in New Mexico on October 20, 2013. Soils were collected under one shrub (Larrea tridentata) and three grass (Bouteloua eriopoda, Bouteloua gracilis, Pleuraphis jamesii) species in grassland, shrubland, and the ecotone region between grasslands and shrublands. Soil fungal communities were evaluated using DNA amplicon sequencing and fungal activity was quantified using several extracellular enzyme activity assays. Soil texture and soil chemistry were also measured.
Publication Date:	2021-06-09

Time Period

Begin:

2013-08-20

End:

2013-08-20

People and Organizations
Contact:	Ladwig, Laura M (University of Wisconsin Oshkosh) [ email ]
Creator:	Ladwig, Laura M (University of Wisconsin Oshkosh)
Creator:	Bell-Dereske, Lukas P (Michigan State University)
Creator:	Bell, Kayce C (Natural History Museum of Los Angeles County)
Creator:	Natvig, Donald O (University of New Mexico)
Creator:	Taylor, D Lee (University of New Mexico)

Data Entities
Data Table Name:	CollectionCoordinates_MUD_transition
Description:	Latitude and longitude for each soil collection point
Data Table Name:	SoilCharacteristics_MUD_transition
Description:	Soil texture and soil chemistry for each soil sample
Data Table Name:	EEA_MUD_transition
Description:	Extracellular enzyme activity levels from each soil sample
Data Table Name:	MUD_fungi_OTU_field_ITS_only_fung_untransformed_csv
Description:	A data matrix that lists the abundance of each fungal OTU (rows) in the soils under each individual plant sampled (columns)
Other Name:	OTU_Matrix_pre_analyses_processing_MUD
Description:	Organizing and processing DNA sequences for soil fungi
Other Name:	Statistical_Analyses_Ploting_MUD_final
Description:	Running statistical analysis and plotting data
Other Name:	MUD_fungi_OTU_field_ITS_only_fung_untransformed
Description:	A data matrix that lists the abundance of each fungal OTU (rows) in the soils under each individual plant sampled (columns) [original] <Each of the 56 samples are a column. The sample name starts with habitat (ecotone, grass, shrub) then plant species abbreviation (boer, bogr, plja, latr) and lastly a replication number (1-8)>

Detailed Metadata

Data Entities

Data Table


Data:	https://pasta-s.lternet.edu/package/data/eml/edi/237/1/03b4168a3ab6bf572bbb5812d53a6a74
Name:	CollectionCoordinates_MUD_transition
Description:	Latitude and longitude for each soil collection point
Number of Records:	56
Number of Columns:	3

Table Structure

Object Name:

CollectionCoordinates_MUD_transition.csv

Size:

2246 bytes

Authentication:

048ab86fc4a9d63f9e9597b44cfc4397 Calculated By MD5

Text Format:

Number of Header Lines:

Record Delimiter:

\r\n

Orientation:

column

Simple Delimited:

Field Delimiter:

Table Column Descriptions

Column Name:

sample

longitude

latitude

Definition:

Identifier for where sample was collected. Includes habitat (ecotone, grass, shrub) then plant species abbreviation (boer, bogr, plja, latr) and lastly a replication number (1-8)

Longitude of collection point

Latitude of collection point

Storage Type:

string

float

Measurement Type:

nominal

ratio

Measurement Values Domain:

Definition

Identifier for where sample was collected. Includes habitat (ecotone, grass, shrub) then plant species abbreviation (boer, bogr, plja, latr) and lastly a replication number (1-8)

Unit	dimensionless
Type	real
Min	-106.6976036
Max	-106.6932749

Unit	dimensionless
Type	real
Min	34.31575988
Max	34.31640025

Missing Value Code:

Accuracy Report:

Accuracy Assessment:

Coverage:

Methods:

Data Table


Data:	https://pasta-s.lternet.edu/package/data/eml/edi/237/1/f5f60825d657d34c10e9fff466874b87
Name:	SoilCharacteristics_MUD_transition
Description:	Soil texture and soil chemistry for each soil sample
Number of Records:	56
Number of Columns:	13

Table Structure

Object Name:

SoilCharacteristics_MUD_transition.csv

Size:

3657 bytes

Authentication:

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Text Format:

Number of Header Lines:

Record Delimiter:

\r\n

Orientation:

column

Simple Delimited:

Field Delimiter:

Table Column Descriptions

Column Name:

Sample

Location

Spp

Rep

SoilProcessID

SAND

SILT

CLAY

P_ppm

K_ppm

OM_percent

NO3_N_ppm

Definition:

Identifier for where sample was collected. Starts with habitat (ecotone, grass, shrub) then plant species abbreviation (boer, bogr, plja, latr) and lastly a replication number (1-8)

Ecosystem type

Species abbreviation for plant species the soil was collected under.

Replicate number.

Unique sample identifier

Percent sand content in soil sample

Percent silt content in soil sample

Percent clay content in soil sample

pH of soil

Amount of phosphorous in the soil sample

Amount of potassium in the soil sample

Percent organic matter content in soil sample

Amount of nitrate in the soil sample

Storage Type:

string

float

Measurement Type:

nominal

ratio

Measurement Values Domain:

Definition

Identifier for where sample was collected. Starts with habitat (ecotone, grass, shrub) then plant species abbreviation (boer, bogr, plja, latr) and lastly a replication number (1-8)

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	Ecotone
Definition	ecotone
Source

Code Definition

Code	Grass
Definition	grassland
Source

Code Definition

Code	Shrub
Definition	shrub
Source

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	LATR
Definition	Larrea tridentata
Source

Code Definition

Code	BOER
Definition	Bouteloua eriopoda
Source

Code Definition

Code	PLJA
Definition	Pleuraphis jamesii
Source

Code Definition

Code	BOGR
Definition	Bouteloua graciis
Source

Definition

Replicate number.

Definition

Unique sample identifier

Unit	percent
Type	real
Min	43.2
Max	69.6

Unit	percent
Type	real
Min	14
Max	30

Unit	percent
Type	real
Min	11.2
Max	30.8

Unit	dimensionless
Type	real
Min	8.2
Max	8.6

Unit	partPerMillion
Type	whole
Min	0
Max	37

Unit	partPerMillion
Type	natural
Min	144
Max	377

Unit	percent
Type	real
Min	0.7
Max	1.7

Unit	partPerMillion
Type	real
Min	0.8
Max	7.4

Missing Value Code:

Accuracy Report:

Accuracy Assessment:

Coverage:

Methods:

Data Table


Data:	https://pasta-s.lternet.edu/package/data/eml/edi/237/1/23ced1442d073b5949ddaf20e1fab3ae
Name:	EEA_MUD_transition
Description:	Extracellular enzyme activity levels from each soil sample
Number of Records:	56
Number of Columns:	12

Table Structure

Object Name:

EEA_MUD_transition.csv

Size:

4459 bytes

Authentication:

1a5d7ee039443e7fc9752e3ab6181004 Calculated By MD5

Text Format:

Number of Header Lines:

Record Delimiter:

\r\n

Orientation:

column

Simple Delimited:

Field Delimiter:

Table Column Descriptions

Column Name:

Sample

Site

Species

Replicate

NAG_soil

NAG_OM

AlkP_soil

AlkP_OM

AAP_soil

AAP_OM

BG_soil

BG_OM

Definition:

Identifier for where sample was collected

Ecosystem type

Species abbreviation for plant species the soil was collected under

Replicate number, Soil was collected from 8 individuals of each species that were present in each system, ranges from 1 - 8

beta-N-acetyl-glucosaminidase activity level per gram soil

beta-N-acetyl-glucosaminidase activity level per gram organic matter

alkaline phosphatase activity level per gram soil

alkaline phosphatase activity level per gram organic matter

alanine aminopeptidase activity level per gram soil

alanine aminopeptidase activity level per gram organic matter

beta-glucosidase activity level per gram soil

beta-glucosidase activity level per gram organic matter

Storage Type:

string

float

Measurement Type:

nominal

ratio

Measurement Values Domain:

Definition

Identifier for where sample was collected

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	E
Definition	ecotone
Source

Code Definition

Code	G
Definition	grassland
Source

Code Definition

Code	S
Definition	shrub
Source

Allowed Values and Definitions

Enumerated Domain

Code Definition

Code	Boer
Definition	Bouteloua eriopoda
Source

Code Definition

Code	Latr
Definition	Larrea tridentata
Source

Code Definition

Code	Plja
Definition	Pleuraphis jamesii
Source

Code Definition

Code	Bogr
Definition	Bouteloua gracilis
Source

Definition

Replicate number, Soil was collected from 8 individuals of each species that were present in each system, ranges from 1 - 8

Unit	nanomolePerHourPerGram
Type	real
Min	1.08
Max	15.53

Unit	nanomolePerHourPerGram
Type	real
Min	70.39
Max	714.13

Unit	nanomolePerHourPerGram
Type	real
Min	21.4
Max	160.74

Unit	nanomolePerHourPerGram
Type	real
Min	1393.17
Max	8625.86

Unit	nanomolePerHourPerGram
Type	real
Min	62.24
Max	342.91

Unit	nanomolePerHourPerGram
Type	real
Min	3106.83
Max	14424.73

Unit	nanomolePerHourPerGram
Type	real
Min	14.47
Max	112.67

Unit	nanomolePerHourPerGram
Type	real
Min	661.59
Max	5872.96

Missing Value Code:

Code	NA
Expl	data missing

Code	NA
Expl	data missing

Code	NA
Expl	data missing

Code	NA
Expl	data missing

Code	NA
Expl	data missing

Code	NA
Expl	data missing

Code	NA
Expl	data missing

Code	NA
Expl	data missing

Accuracy Report:

Accuracy Assessment:

Coverage:

Methods:

Data Table


Data:	https://pasta-s.lternet.edu/package/data/eml/edi/237/1/822590831c2e159688788dad20fc2907
Name:	MUD_fungi_OTU_field_ITS_only_fung_untransformed_csv
Description:	A data matrix that lists the abundance of each fungal OTU (rows) in the soils under each individual plant sampled (columns)
Number of Records:	2654
Number of Columns:	57

Table Structure

Object Name:

MUD_fungi_OTU_field_ITS_only_fung_untransformed_csv.csv

Size:

334076 bytes

Authentication:

e1513926b43dd5c68bee9b3b7b47da3c Calculated By MD5

Text Format:

Number of Header Lines:

Record Delimiter:

\r\n

Orientation:

column

Simple Delimited:

Field Delimiter:

Table Column Descriptions

Column Name:

OTU

fungi_Grass_BOGR_1

fungi_Ecotone_LATR_8

fungi_Ecotone_PLJA_8

fungi_Ecotone_PLJA_1

fungi_Grass_BOER_4

fungi_Grass_BOER_7

fungi_Grass_PLJA_6

fungi_Ecotone_LATR_5

fungi_Shrub_LATR_8

fungi_Grass_BOGR_7

fungi_Ecotone_BOER_7

fungi_Ecotone_PLJA_5

fungi_Ecotone_BOER_4

fungi_Ecotone_LATR_4

fungi_Grass_PLJA_1

fungi_Grass_PLJA_5

fungi_Grass_BOGR_4

fungi_Ecotone_PLJA_3

fungi_Grass_BOGR_5

fungi_Shrub_LATR_3

fungi_Ecotone_BOER_8

fungi_Ecotone_LATR_6

fungi_Ecotone_BOER_3

fungi_Grass_BOER_6

fungi_Grass_PLJA_2

fungi_Shrub_LATR_7

fungi_Shrub_LATR_5

fungi_Grass_BOER_5

fungi_Ecotone_LATR_2

fungi_Shrub_LATR_6

fungi_Ecotone_LATR_3

fungi_Ecotone_LATR_7

fungi_Ecotone_PLJA_7

fungi_Ecotone_BOER_2

fungi_Grass_BOGR_3

fungi_Shrub_LATR_2

fungi_Shrub_LATR_4

fungi_Ecotone_BOER_1

fungi_Ecotone_BOER_5

fungi_Grass_PLJA_7

fungi_Grass_BOER_2

fungi_Grass_BOGR_8

fungi_Grass_BOGR_6

fungi_Ecotone_BOER_6

fungi_Grass_PLJA_8

fungi_Grass_BOGR_2

fungi_Grass_BOER_8

fungi_Grass_PLJA_3

fungi_Shrub_LATR_1

fungi_Grass_BOER_3

fungi_Ecotone_LATR_1

fungi_Ecotone_PLJA_6

fungi_Ecotone_PLJA_2

fungi_Grass_BOER_1

fungi_Ecotone_PLJA_4

fungi_Grass_PLJA_4

Definition:

Fungal operational taxonomic unit

Abundance of fungal OTU sequence reads found in the sample

Storage Type:

string

float

Measurement Type:

nominal

ratio

Measurement Values Domain:

Definition

Fungal operational taxonomic unit

Unit	number
Type	whole
Min	0
Max	3718

Unit	number
Type	whole
Min	0
Max	7387

Unit	number
Type	whole
Min	0
Max	6949

Unit	number
Type	whole
Min	0
Max	8543

Unit	number
Type	whole
Min	0
Max	10189

Unit	number
Type	whole
Min	0
Max	2724

Unit	number
Type	whole
Min	0
Max	17607

Unit	number
Type	whole
Min	0
Max	23655

Unit	number
Type	whole
Min	0
Max	8981

Unit	number
Type	whole
Min	0
Max	6105

Unit	number
Type	whole
Min	0
Max	7313

Unit	number
Type	whole
Min	0
Max	7349

Unit	number
Type	whole
Min	0
Max	10465

Unit	number
Type	whole
Min	0
Max	21916

Unit	number
Type	whole
Min	0
Max	2763

Unit	number
Type	whole
Min	0
Max	5679

Unit	number
Type	whole
Min	0
Max	5782

Unit	number
Type	whole
Min	0
Max	4833

Unit	number
Type	whole
Min	0
Max	17885

Unit	number
Type	whole
Min	0
Max	11122

Unit	number
Type	whole
Min	0
Max	4263

Unit	number
Type	whole
Min	0
Max	1012

Unit	number
Type	whole
Min	0
Max	5430

Unit	number
Type	whole
Min	0
Max	5087

Unit	number
Type	whole
Min	0
Max	4446

Unit	number
Type	whole
Min	0
Max	4453

Unit	number
Type	whole
Min	0
Max	5170

Unit	number
Type	whole
Min	0
Max	5480

Unit	number
Type	whole
Min	0
Max	20342

Unit	number
Type	whole
Min	0
Max	7609

Unit	number
Type	whole
Min	0
Max	6912

Unit	number
Type	whole
Min	0
Max	6580

Unit	number
Type	whole
Min	0
Max	5053

Unit	number
Type	whole
Min	0
Max	4440

Unit	number
Type	whole
Min	0
Max	4470

Unit	number
Type	whole
Min	0
Max	5428

Unit	number
Type	whole
Min	0
Max	5250

Unit	number
Type	whole
Min	0
Max	9862

Unit	number
Type	whole
Min	0
Max	8395

Unit	number
Type	whole
Min	0
Max	3280

Unit	number
Type	whole
Min	0
Max	6852

Unit	number
Type	whole
Min	0
Max	7823

Unit	number
Type	whole
Min	0
Max	6048

Unit	number
Type	whole
Min	0
Max	4015

Unit	number
Type	whole
Min	0
Max	7890

Unit	number
Type	whole
Min	0
Max	4166

Unit	number
Type	whole
Min	0
Max	6687

Unit	number
Type	whole
Min	0
Max	2781

Unit	number
Type	whole
Min	0
Max	5582

Unit	number
Type	whole
Min	0
Max	5868

Unit	number
Type	whole
Min	0
Max	9176

Unit	number
Type	whole
Min	0
Max	17402

Unit	number
Type	whole
Min	0
Max	6578

Unit	number
Type	whole
Min	0
Max	3146

Unit	number
Type	whole
Min	0
Max	18054

Unit	number
Type	whole
Min	0
Max	8304

Missing Value Code:

Accuracy Report:

Accuracy Assessment:

Coverage:

Methods:

Non-Categorized Data Resource

Name:

OTU_Matrix_pre_analyses_processing_MUD

Entity Type:

unknown

Description:

Organizing and processing DNA sequences for soil fungi

Physical Structure Description:

Object Name:

OTU_Matrix_pre_analyses_processing_MUD.R

Size:

21429 bytes

Authentication:

437eb5db5d22284600f24107a2304eb8 Calculated By MD5

Externally Defined Format:

Format Name:

unknown

Data:

https://pasta-s.lternet.edu/package/data/eml/edi/237/1/0ddd945707739a677a9dfcc373a950f8

Non-Categorized Data Resource

Name:

Statistical_Analyses_Ploting_MUD_final

Entity Type:

unknown

Description:

Running statistical analysis and plotting data

Physical Structure Description:

Object Name:

Statistical_Analyses_Ploting_MUD_final.R

Size:

59218 bytes

Authentication:

2d2ccc483f43d8ebe3ab2515dae33feb Calculated By MD5

Externally Defined Format:

Format Name:

unknown

Data:

https://pasta-s.lternet.edu/package/data/eml/edi/237/1/d8235bae3aaba302efc6ca4ac51d6bb9

Non-Categorized Data Resource

Name:

MUD_fungi_OTU_field_ITS_only_fung_untransformed

Entity Type:

unknown

Description:

A data matrix that lists the abundance of each fungal OTU (rows) in the soils under each individual plant sampled (columns) [original] <Each of the 56 samples are a column. The sample name starts with habitat (ecotone, grass, shrub) then plant species abbreviation (boer, bogr, plja, latr) and lastly a replication number (1-8)>

Physical Structure Description:

Object Name:

MUD_fungi_OTU_field_ITS_only_fung_untransformed.txt

Size:

342149 bytes

Authentication:

9efa80859bbc8437529c1eaedf4ab840 Calculated By MD5

Externally Defined Format:

Format Name:

unknown

Data:

https://pasta-s.lternet.edu/package/data/eml/edi/237/1/a33fd333420c9253e71d49cf268f0a53

Data Package Usage Rights

This data package is released to the \"public domain\" under Creative Commons CC0 1.0 \"No Rights Reserved\" (see: https://creativecommons.org/publicdomain/zero/1.0/). It is considered professional etiquette to provide attribution of the original work if this data package is shared in whole or by individual components. A generic citation is provided for this data package on the website https://portal.edirepository.org (herein \"website\") in the summary metadata page. Communication (and collaboration) with the creators of this data package is recommended to prevent duplicate research or publication. This data package (and its components) is made available \"as is\" and with no warranty of accuracy or fitness for use. The creators of this data package and the website shall not be liable for any damages resulting from misinterpretation or misuse of the data package or its components. Periodic updates of this data package may be available from the website. Thank you.

Keywords

By Thesaurus:
LTER Controlled Vocabulary	communities, community patterns, community structure, deserts, grasslands, shrubs, grasses, fungi, microbes, soil
(No thesaurus)	SEV LTER, Sevilleta National Wildlife Refuge, Chihuahuan Desert

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

Methods and protocols used in the collection of this data package

Description:

Soil samples were collected under dominant plant species (1 shrub species, 3 grass species) along a belt transect from shrubland, shrubland-grassland ecotone, and into grasslands at the Sevilleta National Wildlife Refuge, also the site of the Sevilleta Long-Term Ecological Research Program, in central New Mexico, USA. Under each plant, three separate soil samples were collected for measuring microbial community composition via DNA sequencing, microbial activity via extracellular enzyme activity, and soil texture/chemistry. DNA sequencing involved Illumina Miseq V3 paired end sequencing using the 5.8S-Fun/ITS4-Fun primer set to target the fungal ITS2 region. DNA sequences were submitted to NCBI under BioProject PRJNA734481. Potential activity levels of four extracellular enzymes (alkaline phosphatase, beta-N-acetyl-glucosaminidase, alanine aminopeptidase, and beta-glucosidase) were also measured. Full details on study design and lab methods can be found here: Ladwig, L.M., L. P. Bell-Dereske, K. C. Bell, S. L. Collins, D. O. Natvig, D. L. Taylor. In revision. Soil fungal composition changes with shrub encroachment in the northern Chihuahuan Desert. Fungal Ecology.

People and Organizations

Publishers:

Organization:

Environmental Data Initiative

Email Address:

info@environmentaldatainitiative.org

Web Address:

https://environmentaldatainitiative.org

Creators:

Individual:

Laura M Ladwig

Organization:

University of Wisconsin Oshkosh

Email Address:

ladwigl@uwosh.edu

Id:

https://orcid.org/0000-0003-0401-834X

Individual:

Lukas P Bell-Dereske

Organization:

Michigan State University

Email Address:

belldere@msu.edu

Id:

https://orcid.org/0000-0001-9951-2222

Individual:

Kayce C Bell

Organization:

Natural History Museum of Los Angeles County

Email Address:

kayce.bell@gmail.com

Id:

https://orcid.org/0000-0001-6835-0021

Individual:

Donald O Natvig

Organization:

University of New Mexico

Email Address:

dnatvig@gmail.com

Id:

https://orcid.org/0000-0003-0891-6534

Individual:

D Lee Taylor

Organization:

University of New Mexico

Email Address:

fflt@unm.edu

Id:

https://orcid.org/0000-0002-5985-9210

Contacts:

Individual:

Laura M Ladwig

Organization:

University of Wisconsin Oshkosh

Email Address:

ladwigl@uwosh.edu

Id:

https://orcid.org/0000-0003-0401-834X

Temporal, Geographic and Taxonomic Coverage

Temporal, Geographic and/or Taxonomic information that applies to all data in this dataset:

Time Period

Begin:

2013-08-20

End:

2013-08-20

Sampling Site:

Description:

ecotone boer 1

Site Coordinates:

Longitude (degree):

-106.6966325

Latitude (degree):

34.31590294

Sampling Site:

Description:

ecotone boer 2

Site Coordinates:

Longitude (degree):

-106.6961993

Latitude (degree):

34.31594526

Sampling Site:

Description:

ecotone boer 3

Site Coordinates:

Longitude (degree):

-106.6961159

Latitude (degree):

34.31594156

Sampling Site:

Description:

ecotone boer 4

Site Coordinates:

Longitude (degree):

-106.6960408

Latitude (degree):

34.31584367

Sampling Site:

Description:

ecotone boer 5

Site Coordinates:

Longitude (degree):

-106.6960033

Latitude (degree):

34.31595954

Sampling Site:

Description:

ecotone boer 6

Site Coordinates:

Longitude (degree):

-106.6958905

Latitude (degree):

34.3161496

Sampling Site:

Description:

ecotone boer 7

Site Coordinates:

Longitude (degree):

-106.6957765

Latitude (degree):

34.31617449

Sampling Site:

Description:

ecotone boer 8

Site Coordinates:

Longitude (degree):

-106.695599

Latitude (degree):

34.31626518

Sampling Site:

Description:

ecotone latr 1

Site Coordinates:

Longitude (degree):

-106.6966807

Latitude (degree):

34.31590785

Sampling Site:

Description:

ecotone latr 2

Site Coordinates:

Longitude (degree):

-106.6961805

Latitude (degree):

34.3159641

Sampling Site:

Description:

ecotone latr 3

Site Coordinates:

Longitude (degree):

-106.6961057

Latitude (degree):

34.31592538

Sampling Site:

Description:

ecotone latr 4

Site Coordinates:

Longitude (degree):

-106.6960313

Latitude (degree):

34.3158801

Sampling Site:

Description:

ecotone latr 5

Site Coordinates:

Longitude (degree):

-106.6960002

Latitude (degree):

34.31593166

Sampling Site:

Description:

ecotone latr 6

Site Coordinates:

Longitude (degree):

-106.6959011

Latitude (degree):

34.31610982

Sampling Site:

Description:

ecotone latr 7

Site Coordinates:

Longitude (degree):

-106.6958043

Latitude (degree):

34.31619803

Sampling Site:

Description:

ecotone latr 8

Site Coordinates:

Longitude (degree):

-106.6955502

Latitude (degree):

34.3162655

Sampling Site:

Description:

ecotone plja 1

Site Coordinates:

Longitude (degree):

-106.6966878

Latitude (degree):

34.31589209

Sampling Site:

Description:

ecotone plja 2

Site Coordinates:

Longitude (degree):

-106.6961878

Latitude (degree):

34.31594034

Sampling Site:

Description:

ecotone plja 3

Site Coordinates:

Longitude (degree):

-106.6960934

Latitude (degree):

34.31596241

Sampling Site:

Description:

ecotone plja 4

Site Coordinates:

Longitude (degree):

-106.6960646

Latitude (degree):

34.31585308

Sampling Site:

Description:

ecotone plja 5

Site Coordinates:

Longitude (degree):

-106.6960139

Latitude (degree):

34.31597051

Sampling Site:

Description:

ecotone plja 6

Site Coordinates:

Longitude (degree):

-106.6958528

Latitude (degree):

34.3161307

Sampling Site:

Description:

ecotone plja 7

Site Coordinates:

Longitude (degree):

-106.6957678

Latitude (degree):

34.31621119

Sampling Site:

Description:

ecotone plja 8

Site Coordinates:

Longitude (degree):

-106.6955575

Latitude (degree):

34.31624046

Sampling Site:

Description:

grass boer 1

Site Coordinates:

Longitude (degree):

-106.694341

Latitude (degree):

34.31600475

Sampling Site:

Description:

grass boer 2

Site Coordinates:

Longitude (degree):

-106.6942731

Latitude (degree):

34.31595645

Sampling Site:

Description:

grass boer 3

Site Coordinates:

Longitude (degree):

-106.6941709

Latitude (degree):

34.3159418

Sampling Site:

Description:

grass boer 4

Site Coordinates:

Longitude (degree):

-106.6940639

Latitude (degree):

34.31587236

Sampling Site:

Description:

grass boer 5

Site Coordinates:

Longitude (degree):

-106.6939651

Latitude (degree):

34.31616739

Sampling Site:

Description:

grass boer 6

Site Coordinates:

Longitude (degree):

-106.6937529

Latitude (degree):

34.31617961

Sampling Site:

Description:

grass boer 7

Site Coordinates:

Longitude (degree):

-106.6933477

Latitude (degree):

34.31638735

Sampling Site:

Description:

grass boer 8

Site Coordinates:

Longitude (degree):

-106.6932878

Latitude (degree):

34.31634509

Sampling Site:

Description:

grass bogr 1

Site Coordinates:

Longitude (degree):

-106.6943784

Latitude (degree):

34.31601693

Sampling Site:

Description:

grass bogr 2

Site Coordinates:

Longitude (degree):

-106.6942865

Latitude (degree):

34.3159873

Sampling Site:

Description:

grass bogr 3

Site Coordinates:

Longitude (degree):

-106.6941695

Latitude (degree):

34.31595274

Sampling Site:

Description:

grass bogr 4

Site Coordinates:

Longitude (degree):

-106.6940418

Latitude (degree):

34.31588266

Sampling Site:

Description:

grass bogr 5

Site Coordinates:

Longitude (degree):

-106.6940062

Latitude (degree):

34.31611891

Sampling Site:

Description:

grass bogr 6

Site Coordinates:

Longitude (degree):

-106.6937198

Latitude (degree):

34.31619861

Sampling Site:

Description:

grass bogr 7

Site Coordinates:

Longitude (degree):

-106.6933716

Latitude (degree):

34.31640025

Sampling Site:

Description:

grass bogr 8

Site Coordinates:

Longitude (degree):

-106.6933043

Latitude (degree):

34.3163676

Sampling Site:

Description:

grass plja 1

Site Coordinates:

Longitude (degree):

-106.6943673

Latitude (degree):

34.3160036

Sampling Site:

Description:

grass plja 2

Site Coordinates:

Longitude (degree):

-106.694291

Latitude (degree):

34.31596639

Sampling Site:

Description:

grass plja 3

Site Coordinates:

Longitude (degree):

-106.6941782

Latitude (degree):

34.31595322

Sampling Site:

Description:

grass plja 4

Site Coordinates:

Longitude (degree):

-106.6940452

Latitude (degree):

34.31589471

Sampling Site:

Description:

grass plja 5

Site Coordinates:

Longitude (degree):

-106.6940085

Latitude (degree):

34.31610926

Sampling Site:

Description:

grass plja 6

Site Coordinates:

Longitude (degree):

-106.6937457

Latitude (degree):

34.31619964

Sampling Site:

Description:

grass plja 7

Site Coordinates:

Longitude (degree):

-106.6933855

Latitude (degree):

34.31638428

Sampling Site:

Description:

grass plja 8

Site Coordinates:

Longitude (degree):

-106.6932749

Latitude (degree):

34.31633346

Sampling Site:

Description:

shrub latr 1

Site Coordinates:

Longitude (degree):

-106.6976036

Latitude (degree):

34.31575988

Sampling Site:

Description:

shrub latr 2

Site Coordinates:

Longitude (degree):

-106.6975128

Latitude (degree):

34.31578341

Sampling Site:

Description:

shrub latr 3

Site Coordinates:

Longitude (degree):

-106.6973835

Latitude (degree):

34.31581303

Sampling Site:

Description:

shrub latr 4

Site Coordinates:

Longitude (degree):

-106.6973263

Latitude (degree):

34.31579355

Sampling Site:

Description:

shrub latr 5

Site Coordinates:

Longitude (degree):

-106.6972619

Latitude (degree):

34.31580123

Sampling Site:

Description:

shrub latr 6

Site Coordinates:

Longitude (degree):

-106.6972497

Latitude (degree):

34.3158173

Sampling Site:

Description:

shrub latr 7

Site Coordinates:

Longitude (degree):

-106.6972446

Latitude (degree):

34.31584504

Sampling Site:

Description:

shrub latr 8

Site Coordinates:

Longitude (degree):

-106.697187

Latitude (degree):

34.31580615

Taxonomic Range:

Classification:

Rank Name:

kingdom

Rank Value:

Plantae

Common Name:

plants

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 202422 (Plantae)

Classification:

Rank Name:

subkingdom

Rank Value:

Viridiplantae

Common Name:

green plants

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 954898 (Viridiplantae)

Classification:

Rank Name:

infrakingdom

Rank Value:

Streptophyta

Common Name:

land plants

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 846494 (Streptophyta)

Classification:

Rank Name:

superdivision

Rank Value:

Embryophyta

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 954900 (Embryophyta)

Classification:

Rank Name:

division

Rank Value:

Tracheophyta

Common Name:

vascular plants

Common Name:

tracheophytes

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 846496 (Tracheophyta)

Classification:

Rank Name:

subdivision

Rank Value:

Spermatophytina

Common Name:

spermatophytes

Common Name:

seed plants

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 846504 (Spermatophytina)

Classification:

Rank Name:

class

Rank Value:

Magnoliopsida

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 18063 (Magnoliopsida)

Classification:

Rank Name:

superorder

Rank Value:

Rosanae

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 846548 (Rosanae)

Classification:

Rank Name:

order

Rank Value:

Zygophyllales

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 846631 (Zygophyllales)

Classification:

Rank Name:

family

Rank Value:

Zygophyllaceae

Common Name:

caltrop

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 29034 (Zygophyllaceae)

Classification:

Rank Name:

genus

Rank Value:

Larrea

Common Name:

creosotebush

Common Name:

creosote bush

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 29050 (Larrea)

Classification:

Rank Name:	species
Rank Value:	Larrea tridentata
Common Name:	creosotebush
Common Name:	creosote bush
Identifer:	Integrated Taxonomic Information Service (ITIS) Info for ID: 29051 (Larrea tridentata)

Classification:

Rank Name:

kingdom

Rank Value:

Plantae

Common Name:

plants

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 202422 (Plantae)

Classification:

Rank Name:

subkingdom

Rank Value:

Viridiplantae

Common Name:

green plants

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 954898 (Viridiplantae)

Classification:

Rank Name:

infrakingdom

Rank Value:

Streptophyta

Common Name:

land plants

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 846494 (Streptophyta)

Classification:

Rank Name:

superdivision

Rank Value:

Embryophyta

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 954900 (Embryophyta)

Classification:

Rank Name:

division

Rank Value:

Tracheophyta

Common Name:

vascular plants

Common Name:

tracheophytes

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 846496 (Tracheophyta)

Classification:

Rank Name:

subdivision

Rank Value:

Spermatophytina

Common Name:

spermatophytes

Common Name:

seed plants

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 846504 (Spermatophytina)

Classification:

Rank Name:

class

Rank Value:

Magnoliopsida

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 18063 (Magnoliopsida)

Classification:

Rank Name:

superorder

Rank Value:

Lilianae

Common Name:

monocots

Common Name:

monocotyledons

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 846542 (Lilianae)

Classification:

Rank Name:

order

Rank Value:

Poales

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 846620 (Poales)

Classification:

Rank Name:

family

Rank Value:

Poaceae

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 40351 (Poaceae)

Classification:

Rank Name:

genus

Rank Value:

Bouteloua

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 41491 (Bouteloua)

Classification:

Rank Name:	species
Rank Value:	Bouteloua eriopoda
Identifer:	Integrated Taxonomic Information Service (ITIS) Info for ID: 41501 (Bouteloua eriopoda)

Classification:

Rank Name:

kingdom

Rank Value:

Plantae

Common Name:

plants

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 202422 (Plantae)

Classification:

Rank Name:

subkingdom

Rank Value:

Viridiplantae

Common Name:

green plants

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 954898 (Viridiplantae)

Classification:

Rank Name:

infrakingdom

Rank Value:

Streptophyta

Common Name:

land plants

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 846494 (Streptophyta)

Classification:

Rank Name:

superdivision

Rank Value:

Embryophyta

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 954900 (Embryophyta)

Classification:

Rank Name:

division

Rank Value:

Tracheophyta

Common Name:

vascular plants

Common Name:

tracheophytes

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 846496 (Tracheophyta)

Classification:

Rank Name:

subdivision

Rank Value:

Spermatophytina

Common Name:

spermatophytes

Common Name:

seed plants

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 846504 (Spermatophytina)

Classification:

Rank Name:

class

Rank Value:

Magnoliopsida

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 18063 (Magnoliopsida)

Classification:

Rank Name:

superorder

Rank Value:

Lilianae

Common Name:

monocots

Common Name:

monocotyledons

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 846542 (Lilianae)

Classification:

Rank Name:

order

Rank Value:

Poales

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 846620 (Poales)

Classification:

Rank Name:

family

Rank Value:

Poaceae

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 40351 (Poaceae)

Classification:

Rank Name:

genus

Rank Value:

Bouteloua

Identifer:

Integrated Taxonomic Information Service (ITIS)
Info for ID: 41491 (Bouteloua)

Classification:

Rank Name:	species
Rank Value:	Bouteloua gracilis
Identifer:	Integrated Taxonomic Information Service (ITIS) Info for ID: 41493 (Bouteloua gracilis)

Classification:

Rank Name:	species
Rank Value:	Pleuraphis jamesii
Identifer:	Integrated Taxonomic Information Service (ITIS) Info for ID: 507993 (Pleuraphis jamesii)

Classification:

Rank Name:	kingdom
Rank Value:	Fungi
Common Name:	fungi
Identifer:	Integrated Taxonomic Information Service (ITIS) Info for ID: 555705 (Fungi)

Project

Parent Project Information:

Title:

DDIG: Semiarid soil microbial response to global change

Personnel:

Individual:

Laura M Ladwig

Organization:

University of Wisconsin Oshkosh

Email Address:

ladwigl@uwosh.edu

Id:

https://orcid.org/0000-0003-0401-834X

Role:

Principal Investigator

Funding:

NSF DEB-1210309

Related Project:

Title:

LTERV: Long-term pulse dynamics in an aridland ecosystem

Personnel:

Individual:	Scott L Collins
Id:	https://orcid.org/0000-0002-0193-2892
Role:	Principal Investigator

Funding:

NSF DEB 1232294

Maintenance

Maintenance:

Description:	complete
Frequency:

Additional Info

Additional Information:

Information regarding the column naming in MUD_fungi_OTU_field_ITS_only_fung_untransformed:

Other Metadata

Additional Metadata

additionalMetadata
        |___text '\n    '
        |___element 'metadata'
        |     |___text '\n      '
        |     |___element 'unitList'
        |     |     |___text '\n        '
        |     |     |___element 'unit'
        |     |     |     |  \___attribute 'id' = 'nanomolePerHourPerGram'
        |     |     |     |  \___attribute 'multiplierToSI' = '1000000000'
        |     |     |     |  \___attribute 'name' = 'nanomolePerHourPerGram'
        |     |     |     |  \___attribute 'parentSI' = 'molePerHourPerGram'
        |     |     |     |  \___attribute 'unitType' = 'activityLevel'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description'
        |     |     |     |     |___text 'Activity level per gram of substance'
        |     |     |     |___text '\n        '
        |     |     |___text '\n        '
        |     |     |___element 'unit'
        |     |     |     |  \___attribute 'id' = 'partPerMillion'
        |     |     |     |  \___attribute 'multiplierToSI' = '1'
        |     |     |     |  \___attribute 'name' = 'partPerMillion'
        |     |     |     |  \___attribute 'parentSI' = 'milligramPerKilogram'
        |     |     |     |  \___attribute 'unitType' = 'massPerMass'
        |     |     |     |___text '\n          '
        |     |     |     |___element 'description'
        |     |     |     |     |___text 'Equivalent to milligram per kilogram'
        |     |     |     |___text '\n        '
        |     |     |___text '\n      '
        |     |___text '\n    '
        |___text '\n  '

Copyright 2024 Environmental Data Initiative. This material is based upon work supported by the National Science Foundation under grants #2223103 and #2223104. Any opinions, findings, conclusions, or recommendations expressed in the material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation. Please contact us with questions, comments, or for technical assistance regarding this web site or the Environmental Data Initiative. Please read our privacy policy to know what information we collect about you and to understand your privacy rights.

EDI is a collaboration between the University of New Mexico and the University of Wisconsin – Madison, Center for Limnology:

Data Package Metadata View Summary

Soil fungal community and activity under dominant plant species at the Sevilleta National Wildlife Refuge, New Mexico: October 2013

Data Entities

Data Table

Data Table

Data Table

Data Table

Non-Categorized Data Resource

Non-Categorized Data Resource

Non-Categorized Data Resource

Data Package Usage Rights

Keywords

Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

People and Organizations

Temporal, Geographic and Taxonomic Coverage

Project

Parent Project Information:

Maintenance

Additional Info

Additional Metadata

Recently Added

Recently Updated

Data Package Metadata View Summary

Soil fungal community and activity under dominant plant species at the Sevilleta National Wildlife Refuge, New Mexico: October 2013

+/- Data Entities

Data Table

Data Table

Data Table

Data Table

Non-Categorized Data Resource

Non-Categorized Data Resource

Non-Categorized Data Resource

+/- Data Package Usage Rights

+/- Keywords

+/- Methods and Protocols

These methods, instrumentation and/or protocols apply to all data in this dataset:

+/- People and Organizations

+/- Temporal, Geographic and Taxonomic Coverage

+/- Project

Parent Project Information:

+/- Maintenance

+/- Additional Info

+/- Additional Metadata

Data Entities

Data Package Usage Rights

Keywords

Methods and Protocols

People and Organizations

Temporal, Geographic and Taxonomic Coverage

Project

Maintenance

Additional Info

Additional Metadata