Check against LTER requirements for scope.identifier.revision
'scope.n.m', where 'n' and 'm' are integers and 'scope' is one of an allowed set of values
edi.1716.5
2
emlVersion
valid
Type:
metadata
System:
lter
On failure:
error
EML version 2.1.0 or beyond
Check the EML document declaration for version 2.1.0 or higher
eml://ecoinformatics.org/eml-2.1.0 or higher
https://eml.ecoinformatics.org/eml-2.2.0
Validity of this quality report is dependent on this check being valid.
3
schemaValid
valid
Type:
metadata
System:
knb
On failure:
error
Document is schema-valid EML
Check document schema validity
schema-valid
Document validated for namespace: 'https://eml.ecoinformatics.org/eml-2.2.0'
Validity of this quality report is dependent on this check being valid.
4
parserValid
valid
Type:
metadata
System:
knb
On failure:
error
Document is EML parser-valid
Check document using the EML IDs and references parser
Validates with the EML IDs and references parser
EML IDs and references parser succeeded
Validity of this quality report is dependent on this check being valid.
5
schemaValidDereferenced
valid
Type:
metadata
System:
lter
On failure:
error
Dereferenced document is schema-valid EML
References are dereferenced, and the resulting file validated
schema-valid
Dereferenced document validated for namespace: 'https://eml.ecoinformatics.org/eml-2.2.0'
Validity of this quality report is dependent on this check being valid.
6
keywordPresent
valid
Type:
metadata
System:
lter
On failure:
warn
keyword element is present
Checks to see if at least one keyword is present
Presence of one or more keyword elements
5 'keyword' element(s) found
7
methodsElementPresent
valid
Type:
metadata
System:
lter
On failure:
warn
A 'methods' element is present
All datasets should contain a 'methods' element, at a minimum a link to a separate methods doc.
presence of 'methods' at one or more xpaths.
1 'methods' element(s) found
EML Best Practices, p. 28
8
coveragePresent
valid
Type:
metadata
System:
lter
On failure:
warn
coverage element is present
At least one coverage element should be present in a dataset.
At least one of geographicCoverage, taxonomicCoverage, or temporalCoverage is present in the EML.
1 'coverage' element(s) found
9
geographicCoveragePresent
info
Type:
metadata
System:
lter
On failure:
info
geographicCoverage is present
Check that geographicCoverage exists in EML at the dataset level, or at least one entity's level, or at least one attribute's level.
geographicCoverage at least at the dataset level.
1 'geographicCoverage' element(s) found
Many but not all datasets are appropriate to have spatial coverage.
If sampling EML is used within methods, does that obviate geographicCoverage? Or should those sites be repeated or referenced?
EML Best Practices v.2, p. 22-23. "One geographicCoverage element should be included, whose boundingCoordinates describe the extent of the data....Additional geographicCoverage elements may be entered at the dataset level if there are significant distances between study sites and it would be confusing if they were grouped into one bounding box." 6 decimal places.
10
taxonomicCoveragePresent
info
Type:
metadata
System:
lter
On failure:
info
taxonomicCoverage is present
Check that taxonomicCoverage exists in EML at the dataset level, or at least one entity's level, or at least one attribute's level.
taxonomicCoverage at least at the dataset level.
0 'taxonomicCoverage' element(s) found
Only when taxa are pertinent to the dataset will they have taxonomicCoverage.
Could search title, abstract, keywords for any taxonomic name (huge). Could search keywordType="taxonomic".
EML Best Practices v.2, p. 25
11
temporalCoveragePresent
info
Type:
metadata
System:
lter
On failure:
info
temporalCoverage is present
Check that temporalCoverage exists in EML at the dataset level, or at least one entity's level, or at least one attribute's level.
temporalCoverage at least at the dataset level.
1 'temporalCoverage' element(s) found
LTER wants to search datasets by time; the best place to search is the dataset level temporal coverage.
Most datasets have a temporal range.
EML Best Practices v.2, p. 24
12
pastaDoiAbsent
valid
Type:
metadata
System:
lter
On failure:
error
An alternateIdentifier with a DOI system attribute that looks like it is generated by PASTA should not be present
Reject the data package if it contains an alternateIdentifier DOI that looks like PASTA generated it.
No PASTA DOIs are expected to be found in the uploaded data package
No PASTA DOI alternateIdentifier elements found
PASTA DOI values might appear in an uploaded data package (by various mechanisms). PASTA will assign a DOI after the upload has completed successfully, so an initial one should not be there.
13
titleLength
valid
Type:
metadata
System:
lter
On failure:
warn
Dataset title length is at 5 least words.
If the title is shorter than 5 words, it might be insufficient. Title word count between 7 and 20 including prepositions and numbers.
Between 7 and 20 words
11 words found.
EML Best Practices, v.2, p. 13
14
fundingPresence
valid
Type:
metadata
System:
lter
On failure:
warn
check to see if funding element is present
Checks to see if the funding element is included.
the funding element is expected to be included
Agricultural and Food Research Initiative Grant 2021-67019-33424
15
datasetAbstractLength
valid
Type:
metadata
System:
lter
On failure:
warn
Dataset abstract element is a minimum of 20 words
Check the length of a dataset abstract and warn if less than 20 words.
An abstract is 20 words or more.
94 words found.
EML Best Practices
16
duplicateEntityName
valid
Type:
metadata
System:
lter
On failure:
error
There are no duplicate entity names
Checks that content is not duplicated by other entityName elements in the document
entityName is not a duplicate within the document
No duplicates found
Data Manager requires a non-empty, non-duplicate entityName value for every entity
Declare a non-empty entityName and ensure that there are no duplicate entityName values in the document
Entity Report
Entity Name:
fig.1_SOC_TN_CNratio
Entity Identifier:
#
Identifier
Status
Quality Check
Name
Description
Expected
Found
Explanation
Suggestion
Reference
1
entityNameLength
valid
Type:
metadata
System:
knb
On failure:
warn
Length of entityName is not excessive (less than 100 char)
length of entity name is less than 100 characters
entityName value is 100 characters or less
20
2
entityDescriptionPresent
valid
Type:
metadata
System:
lter
On failure:
warn
An entity description is present
Check for presence of an entity description.
EML Best practices pp. 32-33, "...should have enough information for a user..."
true
With entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3
numHeaderLinesPresent
info
Type:
metadata
System:
knb
On failure:
info
'numHeaderLines' element is present
Check for presence of the 'numHeaderLines' element.
Document contains 'numHeaderLines' element.
'numHeaderLines' element: 1
4
numFooterLinesPresent
info
Type:
metadata
System:
knb
On failure:
info
'numFooterLines' element is present
Check for presence of the 'numFooterLines' element.
Document contains 'numFooterLines' element.
No 'numFooterLines' element found
If data file contains footer lines, 'numFooterLines' must be specified.
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 3043 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/Figure1_plot.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
64f476cda6095d68267567a5d76904f9
64f476cda6095d68267567a5d76904f9
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
3043
3043
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 72032 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig.2_marsdenco2_yr_mean.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
ceb35eaa76f35c7f6245f067417169e3
ceb35eaa76f35c7f6245f067417169e3
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
72032
72032
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 871 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig.3_marsden_inorganic_N_incubation.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
5e55bfc5b0e64a1e9752a003dc0b3a67
5e55bfc5b0e64a1e9752a003dc0b3a67
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
871
871
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Succeeded in accessing URL: <![CDATA[file:///home/pasta/local/data/edi.1716.5/eb57a98dcdf1cb82803108ff1479a99d]]>
18
examineRecordDelimiter
valid
Type:
congruency
System:
knb
On failure:
warn
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 2042 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Up to one kilobyte of data should be displayed
Found for displayDownloadData check
<![CDATA[
Model,yrotate,source,mean,sd,se,ci,Cpoolname,Turnover time
MEND,3-year,POC2,-0.025467237,0.178551391,0.06312745,0.149272699,POC2,Decades
MEND,4-year,POC2,0.003613124,0.158657029,0.042402874,0.091605841,POC2,Decades
MEND,3-year,POC1,-0.620577839,1.334913928,0.471963345,1.116015972,POC1,Millennium
MEND,4-year,POC1,-0.65839716,1.133212896,0.302863886,0.654297646,POC1,Millennium
MEND,3-year,MOC,-0.196766565,0.83495647,0.295201691,0.698041077,MOC,Millennium
MEND,4-year,MOC,-0.597951921,0.831581867,0.222249603,0.480141075,MOC,Millennium
MEND,3-year,mg,0.132731241,0.180349947,0.063763335,0.150776329,Microbe[growth+maintenance],Months-Years
MEND,4-year,mg,0.109143997,0.172288152,0.046045946,0.099476218,Microbe[growth+maintenance],Months-Years
ibis,3-year,clit,-0.083989636,0.369679233,0.123226411,0.284160613,Root C,Days-Months
ibis,4-year,clit,-0.022172707,0.416792611,0.111392511,0.240648889,Root C,Days-Months
ibis,3-year,slon,0.255924932,0.133099417,0.044366472,0.102309269,Non-protected active C,Months-Yea]]>
12
urlReturnsData
valid
Type:
congruency
System:
knb
On failure:
error
URL returns data
Checks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig.4_decomposition_rate_in_models_lnR1.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
9543409292701e67e2d20d48c5772bd3
9543409292701e67e2d20d48c5772bd3
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
2042
2042
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 511 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig_S1.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
af612f4ebcac0c9c9485ab5162d212dd
af612f4ebcac0c9c9485ab5162d212dd
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
511
511
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Succeeded in accessing URL: <![CDATA[file:///home/pasta/local/data/edi.1716.5/8b13e6a8e1d78bb0afa6066ce9efd206]]>
18
examineRecordDelimiter
valid
Type:
congruency
System:
knb
On failure:
warn
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 340 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig_S2.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
3402b3ac02025d28e0d87421e517d463
3402b3ac02025d28e0d87421e517d463
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
340
340
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Succeeded in accessing URL: <![CDATA[file:///home/pasta/local/data/edi.1716.5/3759e0dd8a34abc40f885996505d1cf4]]>
18
examineRecordDelimiter
valid
Type:
congruency
System:
knb
On failure:
warn
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 397 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig_S3.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
a085ec25f6a4dfac6fa1a2f7500e7034
a085ec25f6a4dfac6fa1a2f7500e7034
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
397
397
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Succeeded in accessing URL: <![CDATA[file:///home/pasta/local/data/edi.1716.5/68b672acb60a0ccce0ed6cf7e8244975]]>
18
examineRecordDelimiter
valid
Type:
congruency
System:
knb
On failure:
warn
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 3758 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig_S4.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
7a9b9af10f4ac53ec6161a1c41726a64
7a9b9af10f4ac53ec6161a1c41726a64
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
3758
3758
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 1664 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig_S8.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
3e3b3f2ef84540c51635817905e88af1
3e3b3f2ef84540c51635817905e88af1
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
1664
1664
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 1108 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig_S9.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
0d6b08e1d6664b455b5dd120dca438cc
0d6b08e1d6664b455b5dd120dca438cc
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
1108
1108
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 1612 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig_S10.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
5c0cb9fe1ab6c33fee19d4661618b40a
5c0cb9fe1ab6c33fee19d4661618b40a
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
1612
1612
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 1529 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig_S11_ESM_FD_SOCstocks_Comparison.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
278a1eda5960b11433933ae4f33ca7c2
278a1eda5960b11433933ae4f33ca7c2
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
1529
1529
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 2947 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig_S12_ESM_SOC_TNstocks_1m.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
aef0ea1faca0e1c1e67bc17c58299901
aef0ea1faca0e1c1e67bc17c58299901
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
2947
2947
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 2890 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig_S13_ESM_SOC_TNstocks_30cm.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
a803f395c80d3010dbf60f8485403f01
a803f395c80d3010dbf60f8485403f01
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
2890
2890
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 7356 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig_S5.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
7b75659f9e1cb0518f3e68f3c0bb9c6b
7b75659f9e1cb0518f3e68f3c0bb9c6b
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
7356
7356
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 7349 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig_S16.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
2241aefad388337c94ccf18cd4af68a0
2241aefad388337c94ccf18cd4af68a0
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
7349
7349
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 7362 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig_S17.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
bbb6016e176665331804e52dcd264d52
bbb6016e176665331804e52dcd264d52
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
7362
7362
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 7288 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig_S14.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
a6023ca1f8c6be7201bb04129d319040
a6023ca1f8c6be7201bb04129d319040
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
7288
7288
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 7320 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig_S15.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
1677dae9eac6f1654914f7937cd41d2e
1677dae9eac6f1654914f7937cd41d2e
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
7320
7320
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 7380 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Up to one kilobyte of data should be displayed
Found for displayDownloadData check
<![CDATA[
sites,SOC,total N,microbial C pool 1_C mass,microbial C pool 2_C mass,microbial residue_C mass,POC_C mass,MOC_C mass,root C_C mass,root N,SOC_delta,microbial C pool 1_delta,microbial C pool2_delta,microbial residue_delta,POC_delta,MOC_delta,easily decomposable C_delta,poorly decomposable C_delta
C2_1,21.08594036,1.758014313,0.082761815,0.082761815,0.037618797,0.714757147,20.16804079,0.173106,0.00803649,-16.95792803,-11.75646851,-11.75646851,-14.48968481,-14.48968481,-17.21812525,-12,-12
C2_2,19.93839349,1.746159135,0.078257721,0.078257721,0.035571493,0.675858369,19.07044819,0.173106,0.00803649,-16.98052327,-14.68938781,-14.68938781,-16.85739535,-16.85739535,-17.00922532,-12,-12
C2_3,20.06665208,1.571183176,0.078761133,0.078761133,0.035800315,0.680205993,19.19312351,0.173106,0.00803649,-17.71511324,-12.67781376,-12.67781376,-16.10794097,-16.10794097,-18.92111279,-12,-12
C2_4,18.28188595,1.512954946,0.071755968,0.071755968,0.032616167,0.619707181,17.48605067,0.173106,0.00803649,-16.90160368,-15.90763861,]]>
12
urlReturnsData
valid
Type:
congruency
System:
knb
On failure:
error
URL returns data
Checks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig_S6.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
56577c8f50f5ab5c0bba7d793a867e42
56577c8f50f5ab5c0bba7d793a867e42
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
7380
7380
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
No errors expected during data loading or data loading was not attempted for this data entity
The data table loaded successfully into a database
23
numberOfRecords
valid
Type:
congruency
System:
knb
On failure:
warn
Number of records in metadata matches number of rows loaded
Compare number of records specified in metadata to number of records found in data
36
36
The expected number of records (36) was found in the data table.
24
headerRowAttributeNames
info
Type:
congruency
System:
lter
On failure:
info
Header row is displayed alongside attribute names
Compare the content of the data header row to the content of EML attribute names.
No expectation, information only
Found for headerRowAttributeNames check
<![CDATA[*** HEADER ROWS ***
sites,SOC,total N,microbial C pool 1_C mass,microbial C pool 2_C mass,microbial residue_C mass,POC_C mass,MOC_C mass,root C_C mass,root N,SOC_delta,microbial C pool 1_delta,microbial C pool2_delta,microbial residue_delta,POC_delta,MOC_delta,easily decomposable C_delta,poorly decomposable C_delta
*** ATTRIBUTE LIST ***
sites,SOC,total N,microbial C pool 1_C mass,microbial C pool 2_C mass,microbial residue_C mass,POC_C mass,MOC_C mass,root C_C mass,root N,SOC_delta,microbial C pool 1_delta,microbial C pool2_delta,microbial residue_delta,POC_delta,MOC_delta,easily decomposable C_delta,poorly decomposable C_delta]]>
Customer should evaluate the findings
25
dateFormatMatches
valid
Type:
congruency
System:
lter
On failure:
warn
Date format in metadata matches data
dateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.
Format string is preferred, and all data values match the format string
Data values matched the specified formatString.
Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name:
fig_S17_Model_Initial_values_CN_SIM (low soil C pools)
Entity Identifier:
#
Identifier
Status
Quality Check
Name
Description
Expected
Found
Explanation
Suggestion
Reference
1
entityNameLength
valid
Type:
metadata
System:
knb
On failure:
warn
Length of entityName is not excessive (less than 100 char)
length of entity name is less than 100 characters
entityName value is 100 characters or less
54
2
entityDescriptionPresent
valid
Type:
metadata
System:
lter
On failure:
warn
An entity description is present
Check for presence of an entity description.
EML Best practices pp. 32-33, "...should have enough information for a user..."
true
With entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3
numHeaderLinesPresent
info
Type:
metadata
System:
knb
On failure:
info
'numHeaderLines' element is present
Check for presence of the 'numHeaderLines' element.
Document contains 'numHeaderLines' element.
'numHeaderLines' element: 1
4
numFooterLinesPresent
info
Type:
metadata
System:
knb
On failure:
info
'numFooterLines' element is present
Check for presence of the 'numFooterLines' element.
Document contains 'numFooterLines' element.
No 'numFooterLines' element found
If data file contains footer lines, 'numFooterLines' must be specified.
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 7375 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Up to one kilobyte of data should be displayed
Found for displayDownloadData check
<![CDATA[
sites,SOC,total N,microbial C pool 1_C mass,microbial C pool 2_C mass,microbial residue_C mass,POC_C mass,MOC_C mass,root C_C mass,root N,SOC_delta,microbial C pool 1_delta,microbial C pool2_delta,microbial residue_delta,POC_delta,MOC_delta,easily decomposable C_delta,poorly decomposable C_delta
C2_1,21.08594036,1.758014313,0.082761815,0.082761815,0.037618797,0.573208145,20.34720859,0.173106,0.00803649,-16.95792803,-11.75646851,-11.75646851,-14.48968481,-14.48968481,-17.0697754,-12,-12
C2_2,19.93839349,1.746159135,0.078257721,0.078257721,0.035571493,0.542012798,19.23986525,0.173106,0.00803649,-16.98052327,-14.68938781,-14.68938781,-16.85739535,-16.85739535,-17.00263023,-12,-12
C2_3,20.06665208,1.571183176,0.078761133,0.078761133,0.035800315,0.545499428,19.36363039,0.173106,0.00803649,-17.71511324,-12.67781376,-12.67781376,-16.10794097,-16.10794097,-17.80136764,-12,-12
C2_4,18.28188595,1.512954946,0.071755968,0.071755968,0.032616167,0.496981674,17.64139234,0.173106,0.00803649,-16.90160368,-15.90763861,-]]>
12
urlReturnsData
valid
Type:
congruency
System:
knb
On failure:
error
URL returns data
Checks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig_S17_.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
9801f5412a53b44473030d86ac1c54be
9801f5412a53b44473030d86ac1c54be
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
7375
7375
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
No errors expected during data loading or data loading was not attempted for this data entity
The data table loaded successfully into a database
23
numberOfRecords
valid
Type:
congruency
System:
knb
On failure:
warn
Number of records in metadata matches number of rows loaded
Compare number of records specified in metadata to number of records found in data
36
36
The expected number of records (36) was found in the data table.
24
headerRowAttributeNames
info
Type:
congruency
System:
lter
On failure:
info
Header row is displayed alongside attribute names
Compare the content of the data header row to the content of EML attribute names.
No expectation, information only
Found for headerRowAttributeNames check
<![CDATA[*** HEADER ROWS ***
sites,SOC,total N,microbial C pool 1_C mass,microbial C pool 2_C mass,microbial residue_C mass,POC_C mass,MOC_C mass,root C_C mass,root N,SOC_delta,microbial C pool 1_delta,microbial C pool2_delta,microbial residue_delta,POC_delta,MOC_delta,easily decomposable C_delta,poorly decomposable C_delta
*** ATTRIBUTE LIST ***
sites,SOC,total N,microbial C pool 1_C mass,microbial C pool 2_C mass,microbial residue_C mass,POC_C mass,MOC_C mass,root C_C mass,root N,SOC_delta,microbial C pool 1_delta,microbial C pool2_delta,microbial residue_delta,POC_delta,MOC_delta,easily decomposable C_delta,poorly decomposable C_delta]]>
Customer should evaluate the findings
25
dateFormatMatches
valid
Type:
congruency
System:
lter
On failure:
warn
Date format in metadata matches data
dateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.
Format string is preferred, and all data values match the format string
Data values matched the specified formatString.
Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name:
fig_S18 _Model_Initial_values_CN_SIM (higher soil C pools)
Entity Identifier:
#
Identifier
Status
Quality Check
Name
Description
Expected
Found
Explanation
Suggestion
Reference
1
entityNameLength
valid
Type:
metadata
System:
knb
On failure:
warn
Length of entityName is not excessive (less than 100 char)
length of entity name is less than 100 characters
entityName value is 100 characters or less
58
2
entityDescriptionPresent
valid
Type:
metadata
System:
lter
On failure:
warn
An entity description is present
Check for presence of an entity description.
EML Best practices pp. 32-33, "...should have enough information for a user..."
true
With entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3
numHeaderLinesPresent
info
Type:
metadata
System:
knb
On failure:
info
'numHeaderLines' element is present
Check for presence of the 'numHeaderLines' element.
Document contains 'numHeaderLines' element.
'numHeaderLines' element: 1
4
numFooterLinesPresent
info
Type:
metadata
System:
knb
On failure:
info
'numFooterLines' element is present
Check for presence of the 'numFooterLines' element.
Document contains 'numFooterLines' element.
No 'numFooterLines' element found
If data file contains footer lines, 'numFooterLines' must be specified.
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 7378 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Up to one kilobyte of data should be displayed
Found for displayDownloadData check
<![CDATA[
sites,SOC,total N,microbial C pool 1_C mass,microbial C pool 2_C mass,microbial residue_C mass,POC_C mass,MOC_C mass,root C_C mass,root N,SOC_delta,microbial C pool 1_delta,microbial C pool2_delta,microbial residue_delta,POC_delta,MOC_delta,easily decomposable C_delta,poorly decomposable C_delta
C2_1,21.08594036,1.758014313,0.082761815,0.082761815,0.037618797,0.931543744,19.98887299,0.173106,0.00803649,-16.95792803,-11.75646851,-11.75646851,-14.48968481,-14.48968481,-17.11602804,-12,-12
C2_2,19.93839349,1.746159135,0.078257721,0.078257721,0.035571493,0.880846925,18.90103112,0.173106,0.00803649,-16.98052327,-14.68938781,-14.68938781,-16.85739535,-16.85739535,-17.00523382,-12,-12
C2_3,20.06665208,1.571183176,0.078761133,0.078761133,0.035800315,0.886513188,19.02261663,0.173106,0.00803649,-17.71511324,-12.67781376,-12.67781376,-16.10794097,-16.10794097,-17.83172528,-12,-12
C2_4,18.28188595,1.512954946,0.071755968,0.071755968,0.032616167,0.807665023,17.330709,0.173106,0.00803649,-16.90160368,-15.90763861,-1]]>
12
urlReturnsData
valid
Type:
congruency
System:
knb
On failure:
error
URL returns data
Checks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig_S18.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
8ee632ff1ba4860166522ee039659a9b
8ee632ff1ba4860166522ee039659a9b
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
7378
7378
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
No errors expected during data loading or data loading was not attempted for this data entity
The data table loaded successfully into a database
23
numberOfRecords
valid
Type:
congruency
System:
knb
On failure:
warn
Number of records in metadata matches number of rows loaded
Compare number of records specified in metadata to number of records found in data
36
36
The expected number of records (36) was found in the data table.
24
headerRowAttributeNames
info
Type:
congruency
System:
lter
On failure:
info
Header row is displayed alongside attribute names
Compare the content of the data header row to the content of EML attribute names.
No expectation, information only
Found for headerRowAttributeNames check
<![CDATA[*** HEADER ROWS ***
sites,SOC,total N,microbial C pool 1_C mass,microbial C pool 2_C mass,microbial residue_C mass,POC_C mass,MOC_C mass,root C_C mass,root N,SOC_delta,microbial C pool 1_delta,microbial C pool2_delta,microbial residue_delta,POC_delta,MOC_delta,easily decomposable C_delta,poorly decomposable C_delta
*** ATTRIBUTE LIST ***
sites,SOC,total N,microbial C pool 1_C mass,microbial C pool 2_C mass,microbial residue_C mass,POC_C mass,MOC_C mass,root C_C mass,root N,SOC_delta,microbial C pool 1_delta,microbial C pool2_delta,microbial residue_delta,POC_delta,MOC_delta,easily decomposable C_delta,poorly decomposable C_delta]]>
Customer should evaluate the findings
25
dateFormatMatches
valid
Type:
congruency
System:
lter
On failure:
warn
Date format in metadata matches data
dateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.
Format string is preferred, and all data values match the format string
Data values matched the specified formatString.
Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name:
fig_S19_Model_Initial_values_CN_SIM (low root C pools)
Entity Identifier:
#
Identifier
Status
Quality Check
Name
Description
Expected
Found
Explanation
Suggestion
Reference
1
entityNameLength
valid
Type:
metadata
System:
knb
On failure:
warn
Length of entityName is not excessive (less than 100 char)
length of entity name is less than 100 characters
entityName value is 100 characters or less
54
2
entityDescriptionPresent
valid
Type:
metadata
System:
lter
On failure:
warn
An entity description is present
Check for presence of an entity description.
EML Best practices pp. 32-33, "...should have enough information for a user..."
true
With entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3
numHeaderLinesPresent
info
Type:
metadata
System:
knb
On failure:
info
'numHeaderLines' element is present
Check for presence of the 'numHeaderLines' element.
Document contains 'numHeaderLines' element.
'numHeaderLines' element: 1
4
numFooterLinesPresent
info
Type:
metadata
System:
knb
On failure:
info
'numFooterLines' element is present
Check for presence of the 'numFooterLines' element.
Document contains 'numFooterLines' element.
No 'numFooterLines' element found
If data file contains footer lines, 'numFooterLines' must be specified.
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 7312 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Up to one kilobyte of data should be displayed
Found for displayDownloadData check
<![CDATA[
sites,SOC,total N,microbial C pool 1_C mass,microbial C pool 2_C mass,microbial residue_C mass,POC_C mass,MOC_C mass,root C_C mass,root N,SOC_delta,microbial C pool 1_delta,microbial C pool2_delta,microbial residue_delta,POC_delta,MOC_delta,easily decomposable C_delta,poorly decomposable C_delta
C2_1,21.08594036,1.758014313,0.082761815,0.082761815,0.037618797,0.714757147,20.16804079,0.141,0.006545961,-16.95792803,-11.75646851,-11.75646851,-14.48968481,-14.48968481,-17.21812525,-12,-12
C2_2,19.93839349,1.746159135,0.078257721,0.078257721,0.035571493,0.675858369,19.07044819,0.141,0.006545961,-16.98052327,-14.68938781,-14.68938781,-16.85739535,-16.85739535,-17.00922532,-12,-12
C2_3,20.06665208,1.571183176,0.078761133,0.078761133,0.035800315,0.680205993,19.19312351,0.141,0.006545961,-17.71511324,-12.67781376,-12.67781376,-16.10794097,-16.10794097,-18.92111279,-12,-12
C2_4,18.28188595,1.512954946,0.071755968,0.071755968,0.032616167,0.619707181,17.48605067,0.141,0.006545961,-16.90160368,-15.90763861,-15.9076]]>
12
urlReturnsData
valid
Type:
congruency
System:
knb
On failure:
error
URL returns data
Checks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig_S19.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
2069f8e41ef2f06a75ff6788504c5724
2069f8e41ef2f06a75ff6788504c5724
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
7312
7312
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
No errors expected during data loading or data loading was not attempted for this data entity
The data table loaded successfully into a database
23
numberOfRecords
valid
Type:
congruency
System:
knb
On failure:
warn
Number of records in metadata matches number of rows loaded
Compare number of records specified in metadata to number of records found in data
36
36
The expected number of records (36) was found in the data table.
24
headerRowAttributeNames
info
Type:
congruency
System:
lter
On failure:
info
Header row is displayed alongside attribute names
Compare the content of the data header row to the content of EML attribute names.
No expectation, information only
Found for headerRowAttributeNames check
<![CDATA[*** HEADER ROWS ***
sites,SOC,total N,microbial C pool 1_C mass,microbial C pool 2_C mass,microbial residue_C mass,POC_C mass,MOC_C mass,root C_C mass,root N,SOC_delta,microbial C pool 1_delta,microbial C pool2_delta,microbial residue_delta,POC_delta,MOC_delta,easily decomposable C_delta,poorly decomposable C_delta
*** ATTRIBUTE LIST ***
sites,SOC,total N,microbial C pool 1_C mass,microbial C pool 2_C mass,microbial residue_C mass,POC_C mass,MOC_C mass,root C_C mass,root N,SOC_delta,microbial C pool 1_delta,microbial C pool2_delta,microbial residue_delta,POC_delta,MOC_delta,easily decomposable C_delta,poorly decomposable C_delta]]>
Customer should evaluate the findings
25
dateFormatMatches
valid
Type:
congruency
System:
lter
On failure:
warn
Date format in metadata matches data
dateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.
Format string is preferred, and all data values match the format string
Data values matched the specified formatString.
Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name:
fig_S20_Model_Initial_values_CN_SIM (high root C pools)
Entity Identifier:
#
Identifier
Status
Quality Check
Name
Description
Expected
Found
Explanation
Suggestion
Reference
1
entityNameLength
valid
Type:
metadata
System:
knb
On failure:
warn
Length of entityName is not excessive (less than 100 char)
length of entity name is less than 100 characters
entityName value is 100 characters or less
55
2
entityDescriptionPresent
valid
Type:
metadata
System:
lter
On failure:
warn
An entity description is present
Check for presence of an entity description.
EML Best practices pp. 32-33, "...should have enough information for a user..."
true
With entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3
numHeaderLinesPresent
info
Type:
metadata
System:
knb
On failure:
info
'numHeaderLines' element is present
Check for presence of the 'numHeaderLines' element.
Document contains 'numHeaderLines' element.
'numHeaderLines' element: 1
4
numFooterLinesPresent
info
Type:
metadata
System:
knb
On failure:
info
'numFooterLines' element is present
Check for presence of the 'numFooterLines' element.
Document contains 'numFooterLines' element.
No 'numFooterLines' element found
If data file contains footer lines, 'numFooterLines' must be specified.
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 7344 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Up to one kilobyte of data should be displayed
Found for displayDownloadData check
<![CDATA[
sites,SOC,total N,microbial C pool 1_C mass,microbial C pool 2_C mass,microbial residue_C mass,POC_C mass,MOC_C mass,root C_C mass,root N,SOC_delta,microbial C pool 1_delta,microbial C pool2_delta,microbial residue_delta,POC_delta,MOC_delta,easily decomposable C_delta,poorly decomposable C_delta
C2_1,21.08594036,1.758014313,0.082761815,0.082761815,0.037618797,0.714757147,20.16804079,0.267552,0.01242117,-16.95792803,-11.75646851,-11.75646851,-14.48968481,-14.48968481,-17.21812525,-12,-12
C2_2,19.93839349,1.746159135,0.078257721,0.078257721,0.035571493,0.675858369,19.07044819,0.267552,0.01242117,-16.98052327,-14.68938781,-14.68938781,-16.85739535,-16.85739535,-17.00922532,-12,-12
C2_3,20.06665208,1.571183176,0.078761133,0.078761133,0.035800315,0.680205993,19.19312351,0.267552,0.01242117,-17.71511324,-12.67781376,-12.67781376,-16.10794097,-16.10794097,-18.92111279,-12,-12
C2_4,18.28188595,1.512954946,0.071755968,0.071755968,0.032616167,0.619707181,17.48605067,0.267552,0.01242117,-16.90160368,-15.90763861,]]>
12
urlReturnsData
valid
Type:
congruency
System:
knb
On failure:
error
URL returns data
Checks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig_S20.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
93752751903c3c0bb2092990b4c67535
93752751903c3c0bb2092990b4c67535
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
7344
7344
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
No errors expected during data loading or data loading was not attempted for this data entity
The data table loaded successfully into a database
23
numberOfRecords
valid
Type:
congruency
System:
knb
On failure:
warn
Number of records in metadata matches number of rows loaded
Compare number of records specified in metadata to number of records found in data
36
36
The expected number of records (36) was found in the data table.
24
headerRowAttributeNames
info
Type:
congruency
System:
lter
On failure:
info
Header row is displayed alongside attribute names
Compare the content of the data header row to the content of EML attribute names.
No expectation, information only
Found for headerRowAttributeNames check
<![CDATA[*** HEADER ROWS ***
sites,SOC,total N,microbial C pool 1_C mass,microbial C pool 2_C mass,microbial residue_C mass,POC_C mass,MOC_C mass,root C_C mass,root N,SOC_delta,microbial C pool 1_delta,microbial C pool2_delta,microbial residue_delta,POC_delta,MOC_delta,easily decomposable C_delta,poorly decomposable C_delta
*** ATTRIBUTE LIST ***
sites,SOC,total N,microbial C pool 1_C mass,microbial C pool 2_C mass,microbial residue_C mass,POC_C mass,MOC_C mass,root C_C mass,root N,SOC_delta,microbial C pool 1_delta,microbial C pool2_delta,microbial residue_delta,POC_delta,MOC_delta,easily decomposable C_delta,poorly decomposable C_delta]]>
Customer should evaluate the findings
25
dateFormatMatches
valid
Type:
congruency
System:
lter
On failure:
warn
Date format in metadata matches data
dateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.
Format string is preferred, and all data values match the format string
Data values matched the specified formatString.
Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name:
fig_S21_Model_Initial_values_MEND
Entity Identifier:
#
Identifier
Status
Quality Check
Name
Description
Expected
Found
Explanation
Suggestion
Reference
1
entityNameLength
valid
Type:
metadata
System:
knb
On failure:
warn
Length of entityName is not excessive (less than 100 char)
length of entity name is less than 100 characters
entityName value is 100 characters or less
33
2
entityDescriptionPresent
valid
Type:
metadata
System:
lter
On failure:
warn
An entity description is present
Check for presence of an entity description.
EML Best practices pp. 32-33, "...should have enough information for a user..."
true
With entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3
numHeaderLinesPresent
info
Type:
metadata
System:
knb
On failure:
info
'numHeaderLines' element is present
Check for presence of the 'numHeaderLines' element.
Document contains 'numHeaderLines' element.
'numHeaderLines' element: 1
4
numFooterLinesPresent
info
Type:
metadata
System:
knb
On failure:
info
'numFooterLines' element is present
Check for presence of the 'numFooterLines' element.
Document contains 'numFooterLines' element.
No 'numFooterLines' element found
If data file contains footer lines, 'numFooterLines' must be specified.
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 4206 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig_S7.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
08240b72ab77b7815030b06521362b93
08240b72ab77b7815030b06521362b93
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
4206
4206
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 7065 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig_S22.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
f35f17fcc54d109ba864a884cea47037
f35f17fcc54d109ba864a884cea47037
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
7065
7065
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 7074 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig_S23.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
592be6881396a7394c7454a29965da72
592be6881396a7394c7454a29965da72
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
7074
7074
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 7041 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig_S24.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
4d7f57d1240867f718d0f1b44e6c6f7b
4d7f57d1240867f718d0f1b44e6c6f7b
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
7041
7041
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
Warn the user if the numberOfRecords check is not present
A number of records element is expected for this entity
numberOfRecords element found
This is a valuable check that we have the correct table.
8
entitySizePresence
valid
Type:
metadata
System:
knb
On failure:
warn
Check for presence of an entity size element
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 7069 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10
attributeNamesUnique
valid
Type:
metadata
System:
knb
On failure:
warn
Attribute names are unique
Checks if attributeName values are unique in the table. Not required by EML.
Unique attribute names.
true
A good table does not have duplicate column names.
EML Best Practices
11
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/fig_S25.csv]]>
14
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
9c16002229af7c2fd965f5ac9c6dcdfb
9c16002229af7c2fd965f5ac9c6dcdfb
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
7069
7069
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
16
databaseTableCreated
valid
Type:
metadata
System:
knb
On failure:
error
Database table created
Status of creating a database table
A database table is expected to be generated from the EML attributes.
A database table was generated from the attributes description
Data are examined and possible record delimiters are displayed
If no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.
No other potential record delimiters expected in the first row.
No other potential record delimiters were detected. A valid record delimiter was previously detected
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 10222 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
8
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
9
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Up to one kilobyte of data should be displayed
Cannot display NON-PLAIN TEXT DATA
10
urlReturnsData
valid
Type:
congruency
System:
knb
On failure:
error
URL returns data
Checks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/Figure1.py]]>
12
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
95debf03aac89e689578e0fc5fa9deb3
95debf03aac89e689578e0fc5fa9deb3
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
13
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
10222
10222
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
Entity Report
Entity Name:
Figure2
Entity Identifier:
#
Identifier
Status
Quality Check
Name
Description
Expected
Found
Explanation
Suggestion
Reference
1
entityNameLength
valid
Type:
metadata
System:
knb
On failure:
warn
Length of entityName is not excessive (less than 100 char)
length of entity name is less than 100 characters
entityName value is 100 characters or less
7
2
entityDescriptionPresent
valid
Type:
metadata
System:
lter
On failure:
warn
An entity description is present
Check for presence of an entity description.
EML Best practices pp. 32-33, "...should have enough information for a user..."
true
With entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3
numHeaderLinesPresent
info
Type:
metadata
System:
knb
On failure:
info
'numHeaderLines' element is present
Check for presence of the 'numHeaderLines' element.
Document contains 'numHeaderLines' element.
No 'numHeaderLines' element found
If data file contains header lines, 'numHeaderLines' must be specified.
Add 'numHeaderLines' element if needed.
4
numFooterLinesPresent
info
Type:
metadata
System:
knb
On failure:
info
'numFooterLines' element is present
Check for presence of the 'numFooterLines' element.
Document contains 'numFooterLines' element.
No 'numFooterLines' element found
If data file contains footer lines, 'numFooterLines' must be specified.
Add 'numFooterLines' element if needed.
5
fieldDelimiterValid
info
Type:
metadata
System:
knb
On failure:
error
Field delimiter is a single character
Field delimiters should be one character only
A single character is expected
null
A fieldDelimiter value is not checked for binary entities or entities with an externally defined format
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 7379 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
8
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
9
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Up to one kilobyte of data should be displayed
Cannot display NON-PLAIN TEXT DATA
10
urlReturnsData
valid
Type:
congruency
System:
knb
On failure:
error
URL returns data
Checks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/Figure2.R]]>
12
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
6f2d2baf6547e385bf12e8d5fc1fa5d6
6f2d2baf6547e385bf12e8d5fc1fa5d6
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
13
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
7379
7379
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
Entity Report
Entity Name:
Figure3
Entity Identifier:
#
Identifier
Status
Quality Check
Name
Description
Expected
Found
Explanation
Suggestion
Reference
1
entityNameLength
valid
Type:
metadata
System:
knb
On failure:
warn
Length of entityName is not excessive (less than 100 char)
length of entity name is less than 100 characters
entityName value is 100 characters or less
7
2
entityDescriptionPresent
valid
Type:
metadata
System:
lter
On failure:
warn
An entity description is present
Check for presence of an entity description.
EML Best practices pp. 32-33, "...should have enough information for a user..."
true
With entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3
numHeaderLinesPresent
info
Type:
metadata
System:
knb
On failure:
info
'numHeaderLines' element is present
Check for presence of the 'numHeaderLines' element.
Document contains 'numHeaderLines' element.
No 'numHeaderLines' element found
If data file contains header lines, 'numHeaderLines' must be specified.
Add 'numHeaderLines' element if needed.
4
numFooterLinesPresent
info
Type:
metadata
System:
knb
On failure:
info
'numFooterLines' element is present
Check for presence of the 'numFooterLines' element.
Document contains 'numFooterLines' element.
No 'numFooterLines' element found
If data file contains footer lines, 'numFooterLines' must be specified.
Add 'numFooterLines' element if needed.
5
fieldDelimiterValid
info
Type:
metadata
System:
knb
On failure:
error
Field delimiter is a single character
Field delimiters should be one character only
A single character is expected
null
A fieldDelimiter value is not checked for binary entities or entities with an externally defined format
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 3430 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
8
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
9
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Up to one kilobyte of data should be displayed
Cannot display NON-PLAIN TEXT DATA
10
urlReturnsData
valid
Type:
congruency
System:
knb
On failure:
error
URL returns data
Checks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/Figure3.py]]>
12
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
f796acebe0a04504d0064bd00598dff5
f796acebe0a04504d0064bd00598dff5
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
13
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
3430
3430
Examining the entity size is a method for checking that this is the correct entity.
Check the entity size.
Entity Report
Entity Name:
Figure4
Entity Identifier:
#
Identifier
Status
Quality Check
Name
Description
Expected
Found
Explanation
Suggestion
Reference
1
entityNameLength
valid
Type:
metadata
System:
knb
On failure:
warn
Length of entityName is not excessive (less than 100 char)
length of entity name is less than 100 characters
entityName value is 100 characters or less
7
2
entityDescriptionPresent
valid
Type:
metadata
System:
lter
On failure:
warn
An entity description is present
Check for presence of an entity description.
EML Best practices pp. 32-33, "...should have enough information for a user..."
true
With entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3
numHeaderLinesPresent
info
Type:
metadata
System:
knb
On failure:
info
'numHeaderLines' element is present
Check for presence of the 'numHeaderLines' element.
Document contains 'numHeaderLines' element.
No 'numHeaderLines' element found
If data file contains header lines, 'numHeaderLines' must be specified.
Add 'numHeaderLines' element if needed.
4
numFooterLinesPresent
info
Type:
metadata
System:
knb
On failure:
info
'numFooterLines' element is present
Check for presence of the 'numFooterLines' element.
Document contains 'numFooterLines' element.
No 'numFooterLines' element found
If data file contains footer lines, 'numFooterLines' must be specified.
Add 'numFooterLines' element if needed.
5
fieldDelimiterValid
info
Type:
metadata
System:
knb
On failure:
error
Field delimiter is a single character
Field delimiters should be one character only
A single character is expected
null
A fieldDelimiter value is not checked for binary entities or entities with an externally defined format
Look for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.
Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.
Found entity size element with value of 9352 and size unit specified as 'byte'.
Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).
Include an entity size in bytes
Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
8
integrityChecksumPresence
valid
Type:
metadata
System:
lter
On failure:
warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1
Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.
At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.
true
PASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented
in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able
to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.
Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
9
displayDownloadData
info
Type:
data
System:
knb
On failure:
info
Display downloaded data
Display the first kilobyte of data that is downloaded
Up to one kilobyte of data should be displayed
Cannot display NON-PLAIN TEXT DATA
10
urlReturnsData
valid
Type:
congruency
System:
knb
On failure:
error
URL returns data
Checks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.
Succeeded in accessing URL: <![CDATA[https://ezeml.edirepository.org/user-data/Bo_Yi-23a8211a876641f0692cfe1504b8bcad/uploads/Carbon%20decomposition%20and%20nitrogen%20mineralization%20in%20Marsden%20agroecosystem%20diversification%20experiment/Figure4.py]]>
12
integrityChecksum
valid
Type:
congruency
System:
lter
On failure:
error
Compare the metadata checksum for an entity to the checksum of the downloaded entity
Two possible responses: valid if checksums match; error if checksums do not match.
e7805ab8369f651aefcf6715c93fe53d
e7805ab8369f651aefcf6715c93fe53d
Matching checksums will ensure data integrity during upload to the repository.
If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
13
entitySizeCongruence
valid
Type:
congruency
System:
knb
On failure:
error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.
Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.
9352
9352
Examining the entity size is a method for checking that this is the correct entity.