Data Package Quality Report
PackageId: edi.204.9
Report Date/Time: 2021-08-03T19:41:21
Dataset Report
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1packageIdPatternvalid
Type:metadata
System:lter
On failure:error
packageId pattern matches "scope.identifier.revision"Check against LTER requirements for scope.identifier.revision'scope.n.m', where 'n' and 'm' are integers and 'scope' is one of an allowed set of valuesedi.204.9
2emlVersionvalid
Type:metadata
System:lter
On failure:error
EML version 2.1.0 or beyondCheck the EML document declaration for version 2.1.0 or highereml://ecoinformatics.org/eml-2.1.0 or higherhttps://eml.ecoinformatics.org/eml-2.2.0Validity of this quality report is dependent on this check being valid.
3schemaValidvalid
Type:metadata
System:knb
On failure:error
Document is schema-valid EMLCheck document schema validityschema-validDocument validated for namespace: 'https://eml.ecoinformatics.org/eml-2.2.0'Validity of this quality report is dependent on this check being valid.
4parserValidvalid
Type:metadata
System:knb
On failure:error
Document is EML parser-validCheck document using the EML IDs and references parserValidates with the EML IDs and references parserEML IDs and references parser succeededValidity of this quality report is dependent on this check being valid.
5schemaValidDereferencedvalid
Type:metadata
System:lter
On failure:error
Dereferenced document is schema-valid EMLReferences are dereferenced, and the resulting file validatedschema-validDereferenced document validated for namespace: 'https://eml.ecoinformatics.org/eml-2.2.0'Validity of this quality report is dependent on this check being valid.
6keywordPresentvalid
Type:metadata
System:lter
On failure:warn
keyword element is presentChecks to see if at least one keyword is presentPresence of one or more keyword elements9 'keyword' element(s) found
7methodsElementPresentvalid
Type:metadata
System:lter
On failure:warn
A 'methods' element is presentAll datasets should contain a 'methods' element, at a minimum a link to a separate methods doc.presence of 'methods' at one or more xpaths.1 'methods' element(s) foundEML Best Practices, p. 28
8coveragePresentvalid
Type:metadata
System:lter
On failure:warn
coverage element is presentAt least one coverage element should be present in a dataset.At least one of geographicCoverage, taxonomicCoverage, or temporalCoverage is present in the EML.1 'coverage' element(s) found
9geographicCoveragePresentinfo
Type:metadata
System:lter
On failure:info
geographicCoverage is presentCheck that geographicCoverage exists in EML at the dataset level, or at least one entity's level, or at least one attribute's level.geographicCoverage at least at the dataset level.2 'geographicCoverage' element(s) foundMany but not all datasets are appropriate to have spatial coverage.If sampling EML is used within methods, does that obviate geographicCoverage? Or should those sites be repeated or referenced?EML Best Practices v.2, p. 22-23. "One geographicCoverage element should be included, whose boundingCoordinates describe the extent of the data....Additional geographicCoverage elements may be entered at the dataset level if there are significant distances between study sites and it would be confusing if they were grouped into one bounding box." 6 decimal places.
10taxonomicCoveragePresentinfo
Type:metadata
System:lter
On failure:info
taxonomicCoverage is presentCheck that taxonomicCoverage exists in EML at the dataset level, or at least one entity's level, or at least one attribute's level.taxonomicCoverage at least at the dataset level.0 'taxonomicCoverage' element(s) foundOnly when taxa are pertinent to the dataset will they have taxonomicCoverage.Could search title, abstract, keywords for any taxonomic name (huge). Could search keywordType="taxonomic".EML Best Practices v.2, p. 25
11temporalCoveragePresentinfo
Type:metadata
System:lter
On failure:info
temporalCoverage is presentCheck that temporalCoverage exists in EML at the dataset level, or at least one entity's level, or at least one attribute's level.temporalCoverage at least at the dataset level.1 'temporalCoverage' element(s) foundLTER wants to search datasets by time; the best place to search is the dataset level temporal coverage.Most datasets have a temporal range.EML Best Practices v.2, p. 24
12pastaDoiAbsentvalid
Type:metadata
System:lter
On failure:error
An alternateIdentifier with a DOI system attribute that looks like it is generated by PASTA should not be presentReject the data package if it contains an alternateIdentifier DOI that looks like PASTA generated it.No PASTA DOIs are expected to be found in the uploaded data packageNo PASTA DOI alternateIdentifier elements foundPASTA DOI values might appear in an uploaded data package (by various mechanisms). PASTA will assign a DOI after the upload has completed successfully, so an initial one should not be there.
13titleLengthvalid
Type:metadata
System:lter
On failure:warn
Dataset title length is at 5 least words.If the title is shorter than 5 words, it might be insufficient. Title word count between 7 and 20 including prepositions and numbers.Between 7 and 20 words18 words found.EML Best Practices, v.2, p. 13
14fundingPresencevalid
Type:metadata
System:lter
On failure:warn
check to see if funding element is presentChecks to see if the funding element is included.the funding element is expected to be includedUS National Science Foundation 1655197
15datasetAbstractLengthvalid
Type:metadata
System:lter
On failure:warn
Dataset abstract element is a minimum of 20 wordsCheck the length of a dataset abstract and warn if less than 20 words.An abstract is 20 words or more.144 words found.EML Best Practices
16duplicateEntityNamevalid
Type:metadata
System:lter
On failure:error
There are no duplicate entity namesChecks that content is not duplicated by other entityName elements in the documententityName is not a duplicate within the documentNo duplicates foundData Manager requires a non-empty, non-duplicate entityName value for every entityDeclare a non-empty entityName and ensure that there are no duplicate entityName values in the document
Entity Report
Entity Name: EC_003_Galen_2017_Hobo.csv
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less26
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\r\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 267104 and size unit specified as 'bytes'. Please note that a size element specified with a unit other than 'byte' will not be tested for congruence.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYYMMDDThhmmssZA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://portal-s.edirepository.org/nis/data/ucfrresearch-upload-2021-08-03-1628041168744/EC_003_Galen_2017_Hobo.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.2294890489e5cdfd881e10d66b69e49d2294890489e5cdfd881e10d66b69e49dMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.267104267104Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE EC_003_Galen_2017_Hobo_csv("time" TIMESTAMP,"ec" FLOAT,"temp" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed20171017T162500Z, 190.3, 5.56
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/edi.204.9/7cd53ad4b57021fc51360ba474b64c97
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data86728672The expected number of records (8672) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare tne content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: EC_004_Racetrack_2017_Hobo.csv
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less30
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\r\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 266591 and size unit specified as 'bytes'. Please note that a size element specified with a unit other than 'byte' will not be tested for congruence.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYYMMDDThhmmssZA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://portal-s.edirepository.org/nis/data/ucfrresearch-upload-2021-08-03-1628041168744/EC_004_Racetrack_2017_Hobo.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.8c88c3ae07eabb7ef982e2ec702a0c5d8c88c3ae07eabb7ef982e2ec702a0c5dMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.266591266591Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE EC_004_Racetrack_2017_Hobo_csv("time" TIMESTAMP,"ec" FLOAT,"temp" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed20171017T174000Z, 302.6, 6.47
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/edi.204.9/88ea31e07aa1777d5fc656b6ae81785a
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data86608660The expected number of records (8660) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare tne content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: pCO2_003_Galen_2017_SAMI_S5u.csv
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less32
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\r\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 91227 and size unit specified as 'bytes'. Please note that a size element specified with a unit other than 'byte' will not be tested for congruence.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYYMMDDThhmmssZA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://portal-s.edirepository.org/nis/data/ucfrresearch-upload-2021-08-03-1628041168744/pCO2_003_Galen_2017_SAMI_S5u.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.6391dd2e113e0b3bc482e14b1803adbc6391dd2e113e0b3bc482e14b1803adbcMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.9122791227Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE pCO2_003_Galen_2017_SAMI_S5u_c("time" TIMESTAMP,"pCO2" FLOAT,"temp" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed20171017T163002Z, NA, 3.4865
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/edi.204.9/c9a7be5316a1cea09032535edd2466c8
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data27992799The expected number of records (2799) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare tne content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: pCO2_004_Racetrack_2017_SAMI_S53.csv
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less36
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\r\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 96129 and size unit specified as 'bytes'. Please note that a size element specified with a unit other than 'byte' will not be tested for congruence.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYYMMDDThhmmssZA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://portal-s.edirepository.org/nis/data/ucfrresearch-upload-2021-08-03-1628041168744/pCO2_004_Racetrack_2017_SAMI_S53.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.abffc90f92ef04db62ae3f673e4f93c2abffc90f92ef04db62ae3f673e4f93c2Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.9612996129Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE pCO2_004_Racetrack_2017_SAMI_S("time" TIMESTAMP,"pCO2" FLOAT,"temp" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed20171017T174500Z, NA, 6.4742
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/edi.204.9/80e4a4e4d5039d0b05780a532bf55246
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data27942794The expected number of records (2794) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare tne content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: pH_003_Galen_2017_SAMI_P87.csv
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less30
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\r\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 83871 and size unit specified as 'bytes'. Please note that a size element specified with a unit other than 'byte' will not be tested for congruence.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYYMMDDThhmmssZA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://portal-s.edirepository.org/nis/data/ucfrresearch-upload-2021-08-03-1628041168744/pH_003_Galen_2017_SAMI_P87.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.79dd3dad60124f2722a3927e0cdac8d679dd3dad60124f2722a3927e0cdac8d6Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.8387183871Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE pH_003_Galen_2017_SAMI_P87_csv("time" TIMESTAMP,"pH" FLOAT,"temp" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed20171017T162959Z, 8.6513, 5.72
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/edi.204.9/7f99123ffe1c670aded7d02af0ba23ad
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data27992799The expected number of records (2799) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare tne content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: pH_004_Racetrack_2017_SAMI_S13u.csv
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less35
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\r\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 79703 and size unit specified as 'bytes'. Please note that a size element specified with a unit other than 'byte' will not be tested for congruence.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYYMMDDThhmmssZA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://portal-s.edirepository.org/nis/data/ucfrresearch-upload-2021-08-03-1628041168744/pH_004_Racetrack_2017_SAMI_S13u.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.41a978c627794fa69f76dac4d4df1a9a41a978c627794fa69f76dac4d4df1a9aMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.7970379703Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE pH_004_Racetrack_2017_SAMI_S13("time" TIMESTAMP,"pH" FLOAT,"temp" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed20171017T174459Z, 8.8547, 6.39
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/edi.204.9/481172b3627efe5a5156f7c70128afd4
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data27932793The expected number of records (2793) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare tne content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: pressure_003_Galen_2017_Hobo.csv
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less32
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\r\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 268122 and size unit specified as 'bytes'. Please note that a size element specified with a unit other than 'byte' will not be tested for congruence.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYYMMDDThhmmssZA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://portal-s.edirepository.org/nis/data/ucfrresearch-upload-2021-08-03-1628041168744/pressure_003_Galen_2017_Hobo.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.904c231099037563d5b2c10a9a0b1e3c904c231099037563d5b2c10a9a0b1e3cMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.268122268122Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE pressure_003_Galen_2017_Hobo_c("time" TIMESTAMP,"pressure" FLOAT,"temp" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed20171017T163500Z, 89.844, 6.67
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/edi.204.9/bfd353ef70ed3a074637b46e965a1478
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data84118411The expected number of records (8411) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare tne content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: pressure_004_Racetrack_2017_Hobo.csv
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less36
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\r\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 265175 and size unit specified as 'bytes'. Please note that a size element specified with a unit other than 'byte' will not be tested for congruence.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYYMMDDThhmmssZA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://portal-s.edirepository.org/nis/data/ucfrresearch-upload-2021-08-03-1628041168744/pressure_004_Racetrack_2017_Hobo.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.eadc9270beedf6f38a0cae010fc6dd0ceadc9270beedf6f38a0cae010fc6dd0cMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.265175265175Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE pressure_004_Racetrack_2017_Ho("time" TIMESTAMP,"pressure" FLOAT,"temp" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed20171017T175500Z, 87.598, 6.78
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/edi.204.9/4ea989ee7cd52e9c086dd83d179c321b
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data83428342The expected number of records (8342) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare tne content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: QAsamples_003_Galen_2017.csv
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less28
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\r\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 438 and size unit specified as 'bytes'. Please note that a size element specified with a unit other than 'byte' will not be tested for congruence.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYYMMDDThhmmssZA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://portal-s.edirepository.org/nis/data/ucfrresearch-upload-2021-08-03-1628041168744/QAsamples_003_Galen_2017.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.a6b11e860efec360bdb6f7efe5d033afa6b11e860efec360bdb6f7efe5d033afMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.438438Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE QAsamples_003_Galen_2017_csv("time" TIMESTAMP,"pH" FLOAT,"alk" FLOAT,"temp_P87" FLOAT,"pH_P87" FLOAT,"temp" FLOAT,"pCO2_insitu" FLOAT,"pCO2_sample" FLOAT);
18onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/edi.204.9/d59c4c9fe94e20771974bd96bcbe5b18
19examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
20displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed20171026T164500Z, 7.965, 2636, 5.21, 8.128, 3.2, 1469.2, 1006.5
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data66The expected number of records (6) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare tne content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: QAsamples_004_Racetrack_2017.csv
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less32
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\r\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 370 and size unit specified as 'bytes'. Please note that a size element specified with a unit other than 'byte' will not be tested for congruence.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYYMMDDThhmmssZA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://portal-s.edirepository.org/nis/data/ucfrresearch-upload-2021-08-03-1628041168744/QAsamples_004_Racetrack_2017.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.00b1c2767a06f90ac0d9b7ccd6f6573e00b1c2767a06f90ac0d9b7ccd6f6573eMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.370370Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE QAsamples_004_Racetrack_2017_c("time" TIMESTAMP,"pH" FLOAT,"alk" FLOAT,"temp_P87" FLOAT,"temp" FLOAT,"pCO2_insitu" FLOAT,"temp_S53u" FLOAT);
18onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/edi.204.9/d7b5285cd58cdb0f5cbf8cad8db1a947
19examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
20displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed20171026T173500Z, 8.055, 2878, 5.48, NA, 1304.2, 5.52
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data66The expected number of records (6) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare tne content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: 01_input.zip
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less12
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.No 'numHeaderLines' element foundIf data file contains header lines, 'numHeaderLines' must be specified.Add 'numHeaderLines' element if needed.
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidinfo
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expectednullA fieldDelimiter value is not checked for binary entities or entities with an externally defined formathttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentinfo
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0AnullA recordDelimiter value is not checked for binary entities or entities with an externally defined formathttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 1439466 and size unit specified as 'bytes'. Please note that a size element specified with a unit other than 'byte' will not be tested for congruence.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
8integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
9displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayedCannot display NON-PLAIN TEXT DATA
10urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
11onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://portal-s.edirepository.org/nis/data/ucfrresearch-upload-2021-08-03-1628041168744/01_input.zip
12integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.634b673c0dcc2788f2006344c9384662634b673c0dcc2788f2006344c9384662Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
13entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.14394661439466Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
Entity Report
Entity Name: 02_protocol.zip
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less15
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.No 'numHeaderLines' element foundIf data file contains header lines, 'numHeaderLines' must be specified.Add 'numHeaderLines' element if needed.
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidinfo
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expectednullA fieldDelimiter value is not checked for binary entities or entities with an externally defined formathttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentinfo
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0AnullA recordDelimiter value is not checked for binary entities or entities with an externally defined formathttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 210722 and size unit specified as 'bytes'. Please note that a size element specified with a unit other than 'byte' will not be tested for congruence.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
8integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
9displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayedCannot display NON-PLAIN TEXT DATA
10urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
11onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://portal-s.edirepository.org/nis/data/ucfrresearch-upload-2021-08-03-1628041168744/02_protocol.zip
12integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.ee11503307155d604f652efe710b5c32ee11503307155d604f652efe710b5c32Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
13entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.210722210722Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
Entity Report
Entity Name: 03_incremental.zip
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less18
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.No 'numHeaderLines' element foundIf data file contains header lines, 'numHeaderLines' must be specified.Add 'numHeaderLines' element if needed.
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidinfo
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expectednullA fieldDelimiter value is not checked for binary entities or entities with an externally defined formathttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentinfo
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0AnullA recordDelimiter value is not checked for binary entities or entities with an externally defined formathttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 3233325 and size unit specified as 'bytes'. Please note that a size element specified with a unit other than 'byte' will not be tested for congruence.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
8integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
9displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayedCannot display NON-PLAIN TEXT DATA
10urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
11onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://portal-s.edirepository.org/nis/data/ucfrresearch-upload-2021-08-03-1628041168744/03_incremental.zip
12integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.5d00ae30cd3ce76ca3ccaae07014d5805d00ae30cd3ce76ca3ccaae07014d580Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
13entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.32333253233325Examining the entity size is a method for checking that this is the correct entity.Check the entity size.