Data Package Quality Report
PackageId: edi.465.1
Report Date/Time: 2020-01-27T14:43:07
Dataset Report
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1packageIdPatternvalid
Type:metadata
System:lter
On failure:error
packageId pattern matches "scope.identifier.revision"Check against LTER requirements for scope.identifier.revision'scope.n.m', where 'n' and 'm' are integers and 'scope' is one of an allowed set of valuesedi.465.1
2emlVersionvalid
Type:metadata
System:lter
On failure:error
EML version 2.1.0 or beyondCheck the EML document declaration for version 2.1.0 or highereml://ecoinformatics.org/eml-2.1.0 or higherhttps://eml.ecoinformatics.org/eml-2.2.0Validity of this quality report is dependent on this check being valid.
3schemaValidvalid
Type:metadata
System:knb
On failure:error
Document is schema-valid EMLCheck document schema validityschema-validDocument validated for namespace: 'https://eml.ecoinformatics.org/eml-2.2.0'Validity of this quality report is dependent on this check being valid.
4parserValidvalid
Type:metadata
System:knb
On failure:error
Document is EML parser-validCheck document using the EML IDs and references parserValidates with the EML IDs and references parserEML IDs and references parser succeededValidity of this quality report is dependent on this check being valid.
5schemaValidDereferencedvalid
Type:metadata
System:lter
On failure:error
Dereferenced document is schema-valid EMLReferences are dereferenced, and the resulting file validatedschema-validDereferenced document validated for namespace: 'https://eml.ecoinformatics.org/eml-2.2.0'Validity of this quality report is dependent on this check being valid.
6keywordPresentvalid
Type:metadata
System:lter
On failure:warn
keyword element is presentChecks to see if at least one keyword is presentPresence of one or more keyword elements6 'keyword' element(s) found
7methodsElementPresentvalid
Type:metadata
System:lter
On failure:warn
A 'methods' element is presentAll datasets should contain a 'methods' element, at a minimum a link to a separate methods doc.presence of 'methods' at one or more xpaths.1 'methods' element(s) foundEML Best Practices, p. 28
8coveragePresentvalid
Type:metadata
System:lter
On failure:warn
coverage element is presentAt least one coverage element should be present in a dataset.At least one of geographicCoverage, taxonomicCoverage, or temporalCoverage is present in the EML.1 'coverage' element(s) found
9geographicCoveragePresentinfo
Type:metadata
System:lter
On failure:info
geographicCoverage is presentCheck that geographicCoverage exists in EML at the dataset level, or at least one entity's level, or at least one attribute's level.geographicCoverage at least at the dataset level.1 'geographicCoverage' element(s) foundMany but not all datasets are appropriate to have spatial coverage.If sampling EML is used within methods, does that obviate geographicCoverage? Or should those sites be repeated or referenced?EML Best Practices v.2, p. 22-23. "One geographicCoverage element should be included, whose boundingCoordinates describe the extent of the data....Additional geographicCoverage elements may be entered at the dataset level if there are significant distances between study sites and it would be confusing if they were grouped into one bounding box." 6 decimal places.
10taxonomicCoveragePresentinfo
Type:metadata
System:lter
On failure:info
taxonomicCoverage is presentCheck that taxonomicCoverage exists in EML at the dataset level, or at least one entity's level, or at least one attribute's level.taxonomicCoverage at least at the dataset level.7 'taxonomicCoverage' element(s) foundOnly when taxa are pertinent to the dataset will they have taxonomicCoverage.Could search title, abstract, keywords for any taxonomic name (huge). Could search keywordType="taxonomic".EML Best Practices v.2, p. 25
11temporalCoveragePresentinfo
Type:metadata
System:lter
On failure:info
temporalCoverage is presentCheck that temporalCoverage exists in EML at the dataset level, or at least one entity's level, or at least one attribute's level.temporalCoverage at least at the dataset level.1 'temporalCoverage' element(s) foundLTER wants to search datasets by time; the best place to search is the dataset level temporal coverage.Most datasets have a temporal range.EML Best Practices v.2, p. 24
12pastaDoiAbsentvalid
Type:metadata
System:lter
On failure:error
An alternateIdentifier with a DOI system attribute that looks like it is generated by PASTA should not be presentReject the data package if it contains an alternateIdentifier DOI that looks like PASTA generated it.No PASTA DOIs are expected to be found in the uploaded data packageNo PASTA DOI alternateIdentifier elements foundPASTA DOI values might appear in an uploaded data package (by various mechanisms). PASTA will assign a DOI after the upload has completed successfully, so an initial one should not be there.
13titleLengthvalid
Type:metadata
System:lter
On failure:warn
Dataset title length is at 5 least words.If the title is shorter than 5 words, it might be insufficient. Title word count between 7 and 20 including prepositions and numbers.Between 7 and 20 words11 words found.EML Best Practices, v.2, p. 13
14pubDatePresentvalid
Type:metadata
System:lter
On failure:warn
'pubDate' element is presentCheck for presence of the pubDate elementThe date that the dataset was submitted for publication in PASTA must be included. (The EML schema does not require this element, but when present, it does constrain its format to YYYY-MM-DD or just YYYY. Citation format uses only the YYYY portion even if a full date is entered.) 2020-02-01EML Best Practices v.2, p. 17
15datasetAbstractLengthvalid
Type:metadata
System:lter
On failure:warn
Dataset abstract element is a minimum of 20 wordsCheck the length of a dataset abstract and warn if less than 20 words.An abstract is 20 words or more.118 words found.EML Best Practices
16duplicateEntityNamevalid
Type:metadata
System:lter
On failure:error
There are no duplicate entity namesChecks that content is not duplicated by other entityName elements in the documententityName is not a duplicate within the documentNo duplicates foundData Manager requires a non-empty, non-duplicate entityName value for every entityDeclare a non-empty entityName and ensure that there are no duplicate entityName values in the document
Entity Report
Entity Name: Annual cover measurements at Jasper Ridge 1983-2015, all plants
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less63
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 7130 with no unit specified (defaults to 'byte').Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
11displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
12urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
13onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://sbclter.msi.ucsb.edu/external/InformationManagement/EDI/tmp/data_packages/edi465/all_plants.csv
14integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.b2a9a826f77e3b80bff5703115fd790ab2a9a826f77e3b80bff5703115fd790aMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.71307130Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
16databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE Annual_cover_measurements_at_J("uniqueID" TEXT,"1983" FLOAT,"1984" FLOAT,"1985" FLOAT,"1986" FLOAT,"1987" FLOAT,"1988" FLOAT,"1989" FLOAT,"1990" FLOAT,"1991" FLOAT,"1992" FLOAT,"1993" FLOAT,"1994" FLOAT,"1995" FLOAT,"1996" FLOAT,"1997" FLOAT,"1998" FLOAT,"1999" FLOAT,"2000" FLOAT,"2001" FLOAT,"2002" FLOAT,"2003" FLOAT,"2004" FLOAT,"2005" FLOAT,"2006" FLOAT,"2007" FLOAT,"2008" FLOAT,"2009" FLOAT,"2010" FLOAT,"2011" FLOAT,"2012" FLOAT,"2013" FLOAT,"2014" FLOAT,"2015" FLOAT);
17examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
18displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed
19onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/edi.465.1/badfb801e01d356dc9fcd2d329a05686
20tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
21tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
23numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data3636The expected number of records (36) was found in the data table.
24headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare tne content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
25dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: Annual cover measurements at Jasper Ridge 1983-2015, genus Plantago
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less67
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\r\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 5992 with no unit specified (defaults to 'byte').Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
11displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
12urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
13onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://sbclter.msi.ucsb.edu/external/InformationManagement/EDI/tmp/data_packages/edi465/plantago.csv
14integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.bec0db5493dc0df322618e842e67d342bec0db5493dc0df322618e842e67d342Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.59925992Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
16databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE Annual_cover_measurements_at_J_XYZYX_1("uniqueID" TEXT,"1983" FLOAT,"1984" FLOAT,"1985" FLOAT,"1986" FLOAT,"1987" FLOAT,"1988" FLOAT,"1989" FLOAT,"1990" FLOAT,"1991" FLOAT,"1992" FLOAT,"1993" FLOAT,"1994" FLOAT,"1995" FLOAT,"1996" FLOAT,"1997" FLOAT,"1998" FLOAT,"1999" FLOAT,"2000" FLOAT,"2001" FLOAT,"2002" FLOAT,"2003" FLOAT,"2004" FLOAT,"2005" FLOAT,"2006" FLOAT,"2007" FLOAT,"2008" FLOAT,"2009" FLOAT,"2010" FLOAT,"2011" FLOAT,"2012" FLOAT,"2013" FLOAT,"2014" FLOAT,"2015" FLOAT);
17examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
18displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed"c_1_block1_bottom", 48.75, 5.5, 12.5, 11.25, 18.75, 65, 35, 17.5, 5, 8.75, 2.75, 5.5, 8, 8.75, 22.5, 32.5, 6.75, 25, 35, 17.5, 16.25, 8, 9.25, 1.5, 1.5, 4.25, 20, 18.75, 11.25, 10, 13.75, 18.75, 30
19onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/edi.465.1/b146a45ce8f57f15b77e339b42edb5d9
20tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
21tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
23numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data3636The expected number of records (36) was found in the data table.
24headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare tne content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
25dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: Annual cover measurements at Jasper Ridge 1983-2015, genus Bromus
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less65
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\r\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 5000 with no unit specified (defaults to 'byte').Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
11displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
12urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
13onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://sbclter.msi.ucsb.edu/external/InformationManagement/EDI/tmp/data_packages/edi465/bromus.csv
14integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.dba7cfc91294ac41d2ceee70b0c34592dba7cfc91294ac41d2ceee70b0c34592Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.50005000Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
16databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE Annual_cover_measurements_at_J_XYZYX_2("uniqueID" TEXT,"1983" FLOAT,"1984" FLOAT,"1985" FLOAT,"1986" FLOAT,"1987" FLOAT,"1988" FLOAT,"1989" FLOAT,"1990" FLOAT,"1991" FLOAT,"1992" FLOAT,"1993" FLOAT,"1994" FLOAT,"1995" FLOAT,"1996" FLOAT,"1997" FLOAT,"1998" FLOAT,"1999" FLOAT,"2000" FLOAT,"2001" FLOAT,"2002" FLOAT,"2003" FLOAT,"2004" FLOAT,"2005" FLOAT,"2006" FLOAT,"2007" FLOAT,"2008" FLOAT,"2009" FLOAT,"2010" FLOAT,"2011" FLOAT,"2012" FLOAT,"2013" FLOAT,"2014" FLOAT,"2015" FLOAT);
17examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
18displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed"c_1_block1_bottom", 1.5, 1.25, 1, 2.25, 0.75, 0, 0, 0, 0, 0, 0, 0, 2.5, 2.25, 2.25, 0.5, 4.75, 1.5, 4.75, 22.5, 35, 50, 45, 60, 45, 20, 13.3333333333333, 0.5, 0.75, 3.25, 5, 2.75, 1.5
19onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/edi.465.1/43aad227910d34a8a67e198f05584c13
20tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
21tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
23numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data3636The expected number of records (36) was found in the data table.
24headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare tne content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
25dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: Annual cover measurements at Jasper Ridge 1983-2015, genus Lasthenia
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less68
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\r\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 5930 with no unit specified (defaults to 'byte').Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
11displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
12urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
13onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://sbclter.msi.ucsb.edu/external/InformationManagement/EDI/tmp/data_packages/edi465/lasthenia.csv
14integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.17eb8f713c727c8e03918836e6bc358617eb8f713c727c8e03918836e6bc3586Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.59305930Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
16databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE Annual_cover_measurements_at_J_XYZYX_3("uniqueID" TEXT,"1983" FLOAT,"1984" FLOAT,"1985" FLOAT,"1986" FLOAT,"1987" FLOAT,"1988" FLOAT,"1989" FLOAT,"1990" FLOAT,"1991" FLOAT,"1992" FLOAT,"1993" FLOAT,"1994" FLOAT,"1995" FLOAT,"1996" FLOAT,"1997" FLOAT,"1998" FLOAT,"1999" FLOAT,"2000" FLOAT,"2001" FLOAT,"2002" FLOAT,"2003" FLOAT,"2004" FLOAT,"2005" FLOAT,"2006" FLOAT,"2007" FLOAT,"2008" FLOAT,"2009" FLOAT,"2010" FLOAT,"2011" FLOAT,"2012" FLOAT,"2013" FLOAT,"2014" FLOAT,"2015" FLOAT);
17examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
18displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed"c_1_block1_bottom", 32.5, 12.75, 22.5, 20, 17.5, 2.75, 2.75, 1, 0, 5.5, 3, 3.5, 3.5, 15, 0, 1, 4.75, 5.5, 15, 7.5, 5.5, 1, 0, 0.75, 0.25, 0, 2, 1, 1.5, 0, 0.75, 0.25, 2.75
19onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/edi.465.1/d8d729f151133ee0cb4ebc9cdecb912f
20tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
21tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
23numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data3636The expected number of records (36) was found in the data table.
24headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare tne content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
25dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: Annual cover measurements at Jasper Ridge genus Microseris
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less59
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\r\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 5534 with no unit specified (defaults to 'byte').Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
11displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
12urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
13onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://sbclter.msi.ucsb.edu/external/InformationManagement/EDI/tmp/data_packages/edi465/microseris.csv
14integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.8b7c8d078fc9e2a1f112e3832fa9b94b8b7c8d078fc9e2a1f112e3832fa9b94bMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.55345534Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
16databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE Annual_cover_measurements_at_J_XYZYX_4("uniqueID" TEXT,"1983" FLOAT,"1984" FLOAT,"1985" FLOAT,"1986" FLOAT,"1987" FLOAT,"1988" FLOAT,"1989" FLOAT,"1990" FLOAT,"1991" FLOAT,"1992" FLOAT,"1993" FLOAT,"1994" FLOAT,"1995" FLOAT,"1996" FLOAT,"1997" FLOAT,"1998" FLOAT,"1999" FLOAT,"2000" FLOAT,"2001" FLOAT,"2002" FLOAT,"2003" FLOAT,"2004" FLOAT,"2005" FLOAT,"2006" FLOAT,"2007" FLOAT,"2008" FLOAT,"2009" FLOAT,"2010" FLOAT,"2011" FLOAT,"2012" FLOAT,"2013" FLOAT,"2014" FLOAT,"2015" FLOAT);
17examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
18displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed"c_1_block1_bottom", 3.75, 1.75, 0.5, 1, 0.5, 1.75, 3.5, 7.5, 10, 23.75, 47.5, 30, 21.25, 15, 2, 0, 0, 2.25, 11.25, 5, 9.25, 2, 12.5, 1.25, 0, 2.5, 13.3333333333333, 40, 25, 27.5, 32.5, 0.75, 0.5
19onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/edi.465.1/95e0981e44472ecd813f6d798a263539
20tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
21tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
23numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data3636The expected number of records (36) was found in the data table.
24headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare tne content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
25dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: Annual cover measurements at Jasper Ridge 1983-2015, genus Vulpia
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less65
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\r\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 5294 with no unit specified (defaults to 'byte').Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
11displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
12urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
13onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://sbclter.msi.ucsb.edu/external/InformationManagement/EDI/tmp/data_packages/edi465/vulpia.csv
14integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.68967f9e020b45e2e6d92f8cddaf860a68967f9e020b45e2e6d92f8cddaf860aMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.52945294Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
16databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE Annual_cover_measurements_at_J_XYZYX_5("uniqueID" TEXT,"1983" FLOAT,"1984" FLOAT,"1985" FLOAT,"1986" FLOAT,"1987" FLOAT,"1988" FLOAT,"1989" FLOAT,"1990" FLOAT,"1991" FLOAT,"1992" FLOAT,"1993" FLOAT,"1994" FLOAT,"1995" FLOAT,"1996" FLOAT,"1997" FLOAT,"1998" FLOAT,"1999" FLOAT,"2000" FLOAT,"2001" FLOAT,"2002" FLOAT,"2003" FLOAT,"2004" FLOAT,"2005" FLOAT,"2006" FLOAT,"2007" FLOAT,"2008" FLOAT,"2009" FLOAT,"2010" FLOAT,"2011" FLOAT,"2012" FLOAT,"2013" FLOAT,"2014" FLOAT,"2015" FLOAT);
17examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
18displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed"c_1_block1_bottom", 2.75, 0.75, 2.75, 1.5, 0.5, 0, 0.5, 0, 0, 0, 0.75, 0, 0.5, 2, 11.25, 0, 1.25, 6.75, 3, 0.5, 0, 0.5, 8.5, 1, 0.5, 1.5, 10, 0, 0.75, 0.5, 2, 1, 6.75
19onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/edi.465.1/a8f030160f32dcd12dd2b059c9983e17
20tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
21tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
23numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data3636The expected number of records (36) was found in the data table.
24headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare tne content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
25dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: Annual cover measurements at Jasper Ridge 1983-2015, genus Calycadenia
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less70
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\r\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 5752 with no unit specified (defaults to 'byte').Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
11displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
12urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
13onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://sbclter.msi.ucsb.edu/external/InformationManagement/EDI/tmp/data_packages/edi465/calycadenia.csv
14integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.3919ff0ad18291386e62abc548fa3a813919ff0ad18291386e62abc548fa3a81Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.57525752Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
16databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE Annual_cover_measurements_at_J_XYZYX_6("uniqueID" TEXT,"1983" FLOAT,"1984" FLOAT,"1985" FLOAT,"1986" FLOAT,"1987" FLOAT,"1988" FLOAT,"1989" FLOAT,"1990" FLOAT,"1991" FLOAT,"1992" FLOAT,"1993" FLOAT,"1994" FLOAT,"1995" FLOAT,"1996" FLOAT,"1997" FLOAT,"1998" FLOAT,"1999" FLOAT,"2000" FLOAT,"2001" FLOAT,"2002" FLOAT,"2003" FLOAT,"2004" FLOAT,"2005" FLOAT,"2006" FLOAT,"2007" FLOAT,"2008" FLOAT,"2009" FLOAT,"2010" FLOAT,"2011" FLOAT,"2012" FLOAT,"2013" FLOAT,"2014" FLOAT,"2015" FLOAT);
17examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
18displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed
19onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/edi.465.1/0096cc9110ac55fb2e19a38ef6833712
20tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
21tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
23numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data3636The expected number of records (36) was found in the data table.
24headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare tne content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
25dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: Disturbance indexes - gophers
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less29
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\r\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 4448 with no unit specified (defaults to 'byte').Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
11displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
12urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
13onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://sbclter.msi.ucsb.edu/external/InformationManagement/EDI/tmp/data_packages/edi465/gophers.csv
14integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.a3f598ad6fd42ff9c9f99e7b5e3e743fa3f598ad6fd42ff9c9f99e7b5e3e743fMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.44484448Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
16databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE Disturbance_indexes___gophers("ID" TEXT,"c1983" FLOAT,"c1984" FLOAT,"c1985" FLOAT,"c1986" FLOAT,"c1987" FLOAT,"c1988" FLOAT,"c1989" FLOAT,"c1990" FLOAT,"c1991" FLOAT,"c1992" FLOAT,"c1993" FLOAT,"c1994" FLOAT,"c1995" FLOAT,"c1996" FLOAT,"c1997" FLOAT,"c1998" FLOAT,"c1999" FLOAT,"c2000" FLOAT,"c2001" FLOAT,"c2002" FLOAT,"c2003" FLOAT,"c2004" FLOAT,"c2005" FLOAT,"c2006" FLOAT,"c2007" FLOAT,"c2008" FLOAT,"c2009" FLOAT,"c2010" FLOAT,"c2011" FLOAT,"c2012" FLOAT,"c2013" FLOAT,"c2014" FLOAT,"c2015" FLOAT);
17examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
18displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed"c_1_block1_bottom", 1, 2.75, 2.75, 2.25, 0.75, 0.5, 3.75, 2.75, 2.75, 1, 0, 0, 0, 0.75, 0, 0, 1, 2.75, 1, 0, 0, 0, 1.5, 0.5, 3.25, 2.25, 1, 0, 2, 2.75, 0, 0, 1
19onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/edi.465.1/a3b0ebf6b5b8c369f1df19f16ced9a68
20tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
21tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
23numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data3636The expected number of records (36) was found in the data table.
24headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare tne content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
25dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: Plot Coordinates
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less16
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\r\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 944 with no unit specified (defaults to 'byte').Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
11displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
12urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
13onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://sbclter.msi.ucsb.edu/external/InformationManagement/EDI/tmp/data_packages/edi465/plot_coords.csv
14integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.ae6ae678db2e96cb006c9fe2568bd1b6ae6ae678db2e96cb006c9fe2568bd1b6Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.944944Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
16databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE Plot_Coordinates("ID" TEXT,"coordX" FLOAT,"coordY" FLOAT);
17onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/edi.465.1/230b1b68bda38a9e4c1131669bb9d9f6
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayedc_1_block1_bottom, 9.25, 1
20tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
21tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
23numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data3636The expected number of records (36) was found in the data table.
24headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare tne content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
25dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: Soil Depth
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less10
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\r\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 1281 with no unit specified (defaults to 'byte').Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
11displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
12urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
13onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://sbclter.msi.ucsb.edu/external/InformationManagement/EDI/tmp/data_packages/edi465/soil_depth.csv
14integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.41d3857543750c57f5077b0e91e0189a41d3857543750c57f5077b0e91e0189aMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
15entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.12811281Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
16databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE Soil_Depth("treatment" TEXT,"trtrep" TEXT,"plot" TEXT,"soilDepth" TEXT,"minSoilDepth" TEXT,"maxSoilDepth" FLOAT);
17examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
18displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayedc, 1, block1_bottom, 13.8125, 9.5, 22.25
19onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/edi.465.1/44562c30d9f84b72b836bf548205e30a
20tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
21tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
23numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data3636The expected number of records (36) was found in the data table.
24headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare tne content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
25dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: Palmer Drought Indexes for Jasper Ridge
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less39
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\r\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 2851 with no unit specified (defaults to 'byte').Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYYA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://sbclter.msi.ucsb.edu/external/InformationManagement/EDI/tmp/data_packages/edi465/pdsi.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.ad479303083d75827e027b3940725b04ad479303083d75827e027b3940725b04Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.28512851Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE Palmer_Drought_Indexes_for_Jas("samplingYear" TIMESTAMP,"season" TEXT,"PDSI" FLOAT,"PHDI" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1895, g, 1.12, 1.12
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/edi.465.1/81a475fbb19f51380c6a7e0d4b23bbf7
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data122122The expected number of records (122) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare tne content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: Monthly Precipitation
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less21
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\rA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 6154 with no unit specified (defaults to 'byte').Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYYA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://sbclter.msi.ucsb.edu/external/InformationManagement/EDI/tmp/data_packages/edi465/precip_monthly.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.7a1ab3a285d164841f3785d88c6bd8bd7a1ab3a285d164841f3785d88c6bd8bdMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.61546154Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE Monthly_Precipitation("month" BIGINT,"year" TIMESTAMP,"allprecip" FLOAT,"growseason" TEXT,"growseasonnoApr" TEXT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1, 1983, 233, g, g
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/edi.465.1/1bd4fa6864058eb1abe40eecf629d913
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data396396The expected number of records (396) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare tne content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.