Data Package Quality Report
PackageId: knb-lter-ntl.421.1
Report Date/Time: 2022-09-29T16:56:07
Dataset Report
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1packageIdPatternvalid
Type:metadata
System:lter
On failure:error
packageId pattern matches "scope.identifier.revision"Check against LTER requirements for scope.identifier.revision'scope.n.m', where 'n' and 'm' are integers and 'scope' is one of an allowed set of valuesknb-lter-ntl.421.1
2emlVersionvalid
Type:metadata
System:lter
On failure:error
EML version 2.1.0 or beyondCheck the EML document declaration for version 2.1.0 or highereml://ecoinformatics.org/eml-2.1.0 or higherhttps://eml.ecoinformatics.org/eml-2.2.0Validity of this quality report is dependent on this check being valid.
3schemaValidvalid
Type:metadata
System:knb
On failure:error
Document is schema-valid EMLCheck document schema validityschema-validDocument validated for namespace: 'https://eml.ecoinformatics.org/eml-2.2.0'Validity of this quality report is dependent on this check being valid.
4parserValidvalid
Type:metadata
System:knb
On failure:error
Document is EML parser-validCheck document using the EML IDs and references parserValidates with the EML IDs and references parserEML IDs and references parser succeededValidity of this quality report is dependent on this check being valid.
5schemaValidDereferencedvalid
Type:metadata
System:lter
On failure:error
Dereferenced document is schema-valid EMLReferences are dereferenced, and the resulting file validatedschema-validDereferenced document validated for namespace: 'https://eml.ecoinformatics.org/eml-2.2.0'Validity of this quality report is dependent on this check being valid.
6keywordPresentvalid
Type:metadata
System:lter
On failure:warn
keyword element is presentChecks to see if at least one keyword is presentPresence of one or more keyword elements11 'keyword' element(s) found
7methodsElementPresentvalid
Type:metadata
System:lter
On failure:warn
A 'methods' element is presentAll datasets should contain a 'methods' element, at a minimum a link to a separate methods doc.presence of 'methods' at one or more xpaths.1 'methods' element(s) foundEML Best Practices, p. 28
8coveragePresentvalid
Type:metadata
System:lter
On failure:warn
coverage element is presentAt least one coverage element should be present in a dataset.At least one of geographicCoverage, taxonomicCoverage, or temporalCoverage is present in the EML.1 'coverage' element(s) found
9geographicCoveragePresentinfo
Type:metadata
System:lter
On failure:info
geographicCoverage is presentCheck that geographicCoverage exists in EML at the dataset level, or at least one entity's level, or at least one attribute's level.geographicCoverage at least at the dataset level.1 'geographicCoverage' element(s) foundMany but not all datasets are appropriate to have spatial coverage.If sampling EML is used within methods, does that obviate geographicCoverage? Or should those sites be repeated or referenced?EML Best Practices v.2, p. 22-23. "One geographicCoverage element should be included, whose boundingCoordinates describe the extent of the data....Additional geographicCoverage elements may be entered at the dataset level if there are significant distances between study sites and it would be confusing if they were grouped into one bounding box." 6 decimal places.
10taxonomicCoveragePresentinfo
Type:metadata
System:lter
On failure:info
taxonomicCoverage is presentCheck that taxonomicCoverage exists in EML at the dataset level, or at least one entity's level, or at least one attribute's level.taxonomicCoverage at least at the dataset level.0 'taxonomicCoverage' element(s) foundOnly when taxa are pertinent to the dataset will they have taxonomicCoverage.Could search title, abstract, keywords for any taxonomic name (huge). Could search keywordType="taxonomic".EML Best Practices v.2, p. 25
11temporalCoveragePresentinfo
Type:metadata
System:lter
On failure:info
temporalCoverage is presentCheck that temporalCoverage exists in EML at the dataset level, or at least one entity's level, or at least one attribute's level.temporalCoverage at least at the dataset level.1 'temporalCoverage' element(s) foundLTER wants to search datasets by time; the best place to search is the dataset level temporal coverage.Most datasets have a temporal range.EML Best Practices v.2, p. 24
12pastaDoiAbsentvalid
Type:metadata
System:lter
On failure:error
An alternateIdentifier with a DOI system attribute that looks like it is generated by PASTA should not be presentReject the data package if it contains an alternateIdentifier DOI that looks like PASTA generated it.No PASTA DOIs are expected to be found in the uploaded data packageNo PASTA DOI alternateIdentifier elements foundPASTA DOI values might appear in an uploaded data package (by various mechanisms). PASTA will assign a DOI after the upload has completed successfully, so an initial one should not be there.
13titleLengthvalid
Type:metadata
System:lter
On failure:warn
Dataset title length is at 5 least words.If the title is shorter than 5 words, it might be insufficient. Title word count between 7 and 20 including prepositions and numbers.Between 7 and 20 words12 words found.EML Best Practices, v.2, p. 13
14fundingPresencevalid
Type:metadata
System:lter
On failure:warn
check to see if funding element is presentChecks to see if the funding element is included.the funding element is expected to be includedNational Science Foundation
15datasetAbstractLengthvalid
Type:metadata
System:lter
On failure:warn
Dataset abstract element is a minimum of 20 wordsCheck the length of a dataset abstract and warn if less than 20 words.An abstract is 20 words or more.119 words found.EML Best Practices
16duplicateEntityNamevalid
Type:metadata
System:lter
On failure:error
There are no duplicate entity namesChecks that content is not duplicated by other entityName elements in the documententityName is not a duplicate within the documentNo duplicates foundData Manager requires a non-empty, non-duplicate entityName value for every entityDeclare a non-empty entityName and ensure that there are no duplicate entityName values in the document
Entity Report
Entity Name: me_epi_fluxes_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less20
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 2552842 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/me_epi_fluxes.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.654cd620d9cd3b4beb1f7d425547c993654cd620d9cd3b4beb1f7d425547c993Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.25528422552842Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE me_epi_fluxes_output("sampledate" TIMESTAMP,"atm_exhange" FLOAT,"do_entrainment" FLOAT,"resp_sed" FLOAT,"resp_poc_l" FLOAT,"resp_poc_r" FLOAT,"poc_l_settle" FLOAT,"poc_r_settle" FLOAT,"poc_l_entrainment" FLOAT,"poc_r_entrainment" FLOAT,"resp_doc_l" FLOAT,"doc_l_entrainment" FLOAT,"resp_doc_r" FLOAT,"doc_r_entrainment" FLOAT,"npp_value" FLOAT,"resp_total" FLOAT,"doc_l_in" FLOAT,"doc_l_out" FLOAT,"doc_r_in" FLOAT,"doc_r_out" FLOAT,"poc_l_in" FLOAT,"poc_l_out" FLOAT,"poc_r_in" FLOAT,"poc_r_out" FLOAT,"pocl_production" FLOAT,"docl_production" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/f8239971906a24d34970603d21bfca9a
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: mo_epi_fluxes_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less20
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 2829015 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/mo_epi_fluxes.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.9ef8b3bb3e39070801c011124b60e3c39ef8b3bb3e39070801c011124b60e3c3Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.28290152829015Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE mo_epi_fluxes_output("sampledate" TIMESTAMP,"atm_exhange" FLOAT,"do_entrainment" FLOAT,"resp_sed" FLOAT,"resp_poc_l" FLOAT,"resp_poc_r" FLOAT,"poc_l_settle" FLOAT,"poc_r_settle" FLOAT,"poc_l_entrainment" FLOAT,"poc_r_entrainment" FLOAT,"resp_doc_l" FLOAT,"doc_l_entrainment" FLOAT,"resp_doc_r" FLOAT,"doc_r_entrainment" FLOAT,"npp_value" FLOAT,"resp_total" FLOAT,"doc_l_in" FLOAT,"doc_l_out" FLOAT,"doc_r_in" FLOAT,"doc_r_out" FLOAT,"poc_l_in" FLOAT,"poc_l_out" FLOAT,"poc_r_in" FLOAT,"poc_r_out" FLOAT,"pocl_production" FLOAT,"docl_production" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/88f130daeee3d2fa7cdc5258871ac965
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: tr_epi_fluxes_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less20
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 2454978 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/tr_epi_fluxes.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.4bb5b793d00eba7539d59ea1bc3507314bb5b793d00eba7539d59ea1bc350731Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.24549782454978Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE tr_epi_fluxes_output("sampledate" TIMESTAMP,"atm_exhange" FLOAT,"do_entrainment" FLOAT,"resp_sed" FLOAT,"resp_poc_l" FLOAT,"resp_poc_r" FLOAT,"poc_l_settle" FLOAT,"poc_r_settle" FLOAT,"poc_l_entrainment" FLOAT,"poc_r_entrainment" FLOAT,"resp_doc_l" FLOAT,"doc_l_entrainment" FLOAT,"resp_doc_r" FLOAT,"doc_r_entrainment" FLOAT,"npp_value" FLOAT,"resp_total" FLOAT,"doc_l_in" FLOAT,"doc_l_out" FLOAT,"doc_r_in" FLOAT,"doc_r_out" FLOAT,"poc_l_in" FLOAT,"poc_l_out" FLOAT,"poc_r_in" FLOAT,"poc_r_out" FLOAT,"pocl_production" FLOAT,"docl_production" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, 0, NA, NA, NA, 0, NA, NA, NA, NA, NA
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/340a78670f736f3d3ef6d9753c325445
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: al_epi_fluxes_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less20
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 2452924 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/al_epi_fluxes.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.12038f9258328a16065bb0597b999e9212038f9258328a16065bb0597b999e92Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.24529242452924Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE al_epi_fluxes_output("sampledate" TIMESTAMP,"atm_exhange" FLOAT,"do_entrainment" FLOAT,"resp_sed" FLOAT,"resp_poc_l" FLOAT,"resp_poc_r" FLOAT,"poc_l_settle" FLOAT,"poc_r_settle" FLOAT,"poc_l_entrainment" FLOAT,"poc_r_entrainment" FLOAT,"resp_doc_l" FLOAT,"doc_l_entrainment" FLOAT,"resp_doc_r" FLOAT,"doc_r_entrainment" FLOAT,"npp_value" FLOAT,"resp_total" FLOAT,"doc_l_in" FLOAT,"doc_l_out" FLOAT,"doc_r_in" FLOAT,"doc_r_out" FLOAT,"poc_l_in" FLOAT,"poc_l_out" FLOAT,"poc_r_in" FLOAT,"poc_r_out" FLOAT,"pocl_production" FLOAT,"docl_production" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/1e0467fd4c1719bca995edb29414ffb0
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: bm_epi_fluxes_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less20
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 2454454 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/bm_epi_fluxes.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.9dc60576ed07f307168595a8b4df45e89dc60576ed07f307168595a8b4df45e8Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.24544542454454Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE bm_epi_fluxes_output("sampledate" TIMESTAMP,"atm_exhange" FLOAT,"do_entrainment" FLOAT,"resp_sed" FLOAT,"resp_poc_l" FLOAT,"resp_poc_r" FLOAT,"poc_l_settle" FLOAT,"poc_r_settle" FLOAT,"poc_l_entrainment" FLOAT,"poc_r_entrainment" FLOAT,"resp_doc_l" FLOAT,"doc_l_entrainment" FLOAT,"resp_doc_r" FLOAT,"doc_r_entrainment" FLOAT,"npp_value" FLOAT,"resp_total" FLOAT,"doc_l_in" FLOAT,"doc_l_out" FLOAT,"doc_r_in" FLOAT,"doc_r_out" FLOAT,"poc_l_in" FLOAT,"poc_l_out" FLOAT,"poc_r_in" FLOAT,"poc_r_out" FLOAT,"pocl_production" FLOAT,"docl_production" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/72b0fdde999db04dcc304e636af6a67a
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: sp_epi_fluxes_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less20
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 2497710 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/sp_epi_fluxes.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.9d81b51fc74789f7e69eae47e3e361a39d81b51fc74789f7e69eae47e3e361a3Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.24977102497710Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE sp_epi_fluxes_output("sampledate" TIMESTAMP,"atm_exhange" FLOAT,"do_entrainment" FLOAT,"resp_sed" FLOAT,"resp_poc_l" FLOAT,"resp_poc_r" FLOAT,"poc_l_settle" FLOAT,"poc_r_settle" FLOAT,"poc_l_entrainment" FLOAT,"poc_r_entrainment" FLOAT,"resp_doc_l" FLOAT,"doc_l_entrainment" FLOAT,"resp_doc_r" FLOAT,"doc_r_entrainment" FLOAT,"npp_value" FLOAT,"resp_total" FLOAT,"doc_l_in" FLOAT,"doc_l_out" FLOAT,"doc_r_in" FLOAT,"doc_r_out" FLOAT,"poc_l_in" FLOAT,"poc_l_out" FLOAT,"poc_r_in" FLOAT,"poc_r_out" FLOAT,"pocl_production" FLOAT,"docl_production" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/2b84ae6802ddcf3b8da0659881589e89
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: me_hypo_fluxes_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less21
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 1007954 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/me_hypo_fluxes.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.a7382d5e3d8ad85306bf0cbcc0daf47fa7382d5e3d8ad85306bf0cbcc0daf47fMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.10079541007954Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE me_hypo_fluxes_output("sampledate" TIMESTAMP,"resp_sed" FLOAT,"resp_poc_l" FLOAT,"resp_poc_r" FLOAT,"poc_l_settle" FLOAT,"poc_r_settle" FLOAT,"resp_doc_l" FLOAT,"resp_doc_r" FLOAT,"npp_value" FLOAT,"resp_total" FLOAT,"pocr_sediment_flux" FLOAT,"pocl_sediment_flux" FLOAT,"poc_total_sediment_flux" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/7877782779ce155df0485fa10ac1ddb4
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: mo_hypo_fluxes_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less21
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 1010166 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/mo_hypo_fluxes.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.cb143d830e788ae0ba8afd626c0bcbc1cb143d830e788ae0ba8afd626c0bcbc1Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.10101661010166Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE mo_hypo_fluxes_output("sampledate" TIMESTAMP,"resp_sed" FLOAT,"resp_poc_l" FLOAT,"resp_poc_r" FLOAT,"poc_l_settle" FLOAT,"poc_r_settle" FLOAT,"resp_doc_l" FLOAT,"resp_doc_r" FLOAT,"npp_value" FLOAT,"resp_total" FLOAT,"pocr_sediment_flux" FLOAT,"pocl_sediment_flux" FLOAT,"poc_total_sediment_flux" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/485600283637d582994b8981554b7a3a
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: tr_hypo_fluxes_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less21
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 1011397 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/tr_hypo_fluxes.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.2bb0d146b6b9df89147e7336d6fdebd12bb0d146b6b9df89147e7336d6fdebd1Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.10113971011397Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE tr_hypo_fluxes_output("sampledate" TIMESTAMP,"resp_sed" FLOAT,"resp_poc_l" FLOAT,"resp_poc_r" FLOAT,"poc_l_settle" FLOAT,"poc_r_settle" FLOAT,"resp_doc_l" FLOAT,"resp_doc_r" FLOAT,"npp_value" FLOAT,"resp_total" FLOAT,"pocr_sediment_flux" FLOAT,"pocl_sediment_flux" FLOAT,"poc_total_sediment_flux" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/6fb4c41c30e0ceafdfcf51550bbd1d8c
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: al_hypo_fluxes_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less21
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 1015275 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/al_hypo_fluxes.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.6a013db2fa12bd227be00f23e87b122a6a013db2fa12bd227be00f23e87b122aMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.10152751015275Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE al_hypo_fluxes_output("sampledate" TIMESTAMP,"resp_sed" FLOAT,"resp_poc_l" FLOAT,"resp_poc_r" FLOAT,"poc_l_settle" FLOAT,"poc_r_settle" FLOAT,"resp_doc_l" FLOAT,"resp_doc_r" FLOAT,"npp_value" FLOAT,"resp_total" FLOAT,"pocr_sediment_flux" FLOAT,"pocl_sediment_flux" FLOAT,"poc_total_sediment_flux" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/ccef8863b8730a698fb478a3632d129a
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: bm_hypo_fluxes_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less21
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 1032393 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/bm_hypo_fluxes.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.6e04e4fa5c7018661c0ea292aad4fe8b6e04e4fa5c7018661c0ea292aad4fe8bMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.10323931032393Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE bm_hypo_fluxes_output("sampledate" TIMESTAMP,"resp_sed" FLOAT,"resp_poc_l" FLOAT,"resp_poc_r" FLOAT,"poc_l_settle" FLOAT,"poc_r_settle" FLOAT,"resp_doc_l" FLOAT,"resp_doc_r" FLOAT,"npp_value" FLOAT,"resp_total" FLOAT,"pocr_sediment_flux" FLOAT,"pocl_sediment_flux" FLOAT,"poc_total_sediment_flux" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/ba584c986fc45d2406d1fe47107c6272
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: sp_hypo_fluxes_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less21
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 1073150 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/sp_hypo_fluxes.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.d8a9eebd45a48708bc53d93f17767035d8a9eebd45a48708bc53d93f17767035Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.10731501073150Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE sp_hypo_fluxes_output("sampledate" TIMESTAMP,"resp_sed" FLOAT,"resp_poc_l" FLOAT,"resp_poc_r" FLOAT,"poc_l_settle" FLOAT,"poc_r_settle" FLOAT,"resp_doc_l" FLOAT,"resp_doc_r" FLOAT,"npp_value" FLOAT,"resp_total" FLOAT,"pocr_sediment_flux" FLOAT,"pocl_sediment_flux" FLOAT,"poc_total_sediment_flux" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/9df174c422bc4d37477333234e8b01e2
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: me_epi_vars_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less18
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 697132 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/me_epi_vars.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.0f3a76ad8a36ef29017fa149a69011f10f3a76ad8a36ef29017fa149a69011f1Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.697132697132Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE me_epi_vars_output("sampledate" TIMESTAMP,"do_value" FLOAT,"poc_l_value" FLOAT,"poc_r_value" FLOAT,"doc_l_value" FLOAT,"doc_r_value" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, 7288345665.21166, 0, 250542840.613506, 0, 2505428406.13506
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/13a2450fd0467af260c282c448520a93
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: mo_epi_vars_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less18
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 697242 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/mo_epi_vars.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.faf7ac1c4ff774d89b39a352281a8ad3faf7ac1c4ff774d89b39a352281a8ad3Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.697242697242Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE mo_epi_vars_output("sampledate" TIMESTAMP,"do_value" FLOAT,"poc_l_value" FLOAT,"poc_r_value" FLOAT,"doc_l_value" FLOAT,"doc_r_value" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, 2215658063.56295, 0, 76486418.3022829, 0, 764864183.022829
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/61db84419865ad09a53cecdda74f2ac9
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: tr_epi_vars_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less18
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 697331 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/tr_epi_vars.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.4d0847e67fa9da165c44c5ef0c92e19f4d0847e67fa9da165c44c5ef0c92e19fMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.697331697331Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE tr_epi_vars_output("sampledate" TIMESTAMP,"do_value" FLOAT,"poc_l_value" FLOAT,"poc_r_value" FLOAT,"doc_l_value" FLOAT,"doc_r_value" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, 2984462491.74131, 0, 42860995.812, 107152489.53, 535762447.65
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/87d16425a47296e651b3a0fcc8298830
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: al_epi_vars_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less18
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 697067 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/al_epi_vars.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.f561e4bbfcdfc04c74bb3e28c4234e11f561e4bbfcdfc04c74bb3e28c4234e11Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.697067697067Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE al_epi_vars_output("sampledate" TIMESTAMP,"do_value" FLOAT,"poc_l_value" FLOAT,"poc_r_value" FLOAT,"doc_l_value" FLOAT,"doc_r_value" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, 91004925.250539, 0, 1313918.5091721, 3284796.27293026, 19708777.6375816
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/376b2bf7296cea11ad4aa123659ae3c1
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: bm_epi_vars_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less18
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 697311 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/bm_epi_vars.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.f63f70d9deda790cc64351dae833f916f63f70d9deda790cc64351dae833f916Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.697311697311Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE bm_epi_vars_output("sampledate" TIMESTAMP,"do_value" FLOAT,"poc_l_value" FLOAT,"poc_r_value" FLOAT,"doc_l_value" FLOAT,"doc_r_value" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, 368540231.802131, 0, 5411147.37936, 13527868.4484, 94695079.1388001
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/2cd81d517c3242f0a1b944aa07c3d2fd
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: sp_epi_vars_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less18
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 697418 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/sp_epi_vars.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.a67bf7e8b5adcb590f3f918e789a4015a67bf7e8b5adcb590f3f918e789a4015Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.697418697418Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE sp_epi_vars_output("sampledate" TIMESTAMP,"do_value" FLOAT,"poc_l_value" FLOAT,"poc_r_value" FLOAT,"doc_l_value" FLOAT,"doc_r_value" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, 87794822.7509893, 0, 1273049.3498089, 3182623.37452225, 22278363.6216558
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/c978826ed9dce9bcf34d8190a9de65aa
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: me_hypo_vars_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less19
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 393168 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/me_hypo_vars.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.88cb69be65a5aa70c1654397bfa7f42c88cb69be65a5aa70c1654397bfa7f42cMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.393168393168Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE me_hypo_vars_output("sampledate" TIMESTAMP,"do_value" FLOAT,"poc_l_value" FLOAT,"poc_r_value" FLOAT,"doc_l_value" FLOAT,"doc_r_value" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, 0, 0, 0, 0, 0
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/f24311549b4efbfc9e3b9d39ed725bd5
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: mo_hypo_vars_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less19
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 394616 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/mo_hypo_vars.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.e2b823a0a820db5782f6ad8f20fb191ee2b823a0a820db5782f6ad8f20fb191eMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.394616394616Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE mo_hypo_vars_output("sampledate" TIMESTAMP,"do_value" FLOAT,"poc_l_value" FLOAT,"poc_r_value" FLOAT,"doc_l_value" FLOAT,"doc_r_value" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, 0, 0, 0, 0, 0
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/0df4c2adddd846ed99cc16164797d7b7
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: tr_hypo_vars_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less19
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 392319 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/tr_hypo_vars.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.26507e11bbc4e4ed0859db14f34f30c826507e11bbc4e4ed0859db14f34f30c8Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.392319392319Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE tr_hypo_vars_output("sampledate" TIMESTAMP,"do_value" FLOAT,"poc_l_value" FLOAT,"poc_r_value" FLOAT,"doc_l_value" FLOAT,"doc_r_value" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, 0, 0, 0, 0, 0
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/e43646eeb9658799d55ec598c1c44d8d
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: al_hypo_vars_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less19
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 394285 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/al_hypo_vars.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.d9fa4ee12fc8cc0979363dcda4861798d9fa4ee12fc8cc0979363dcda4861798Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.394285394285Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE al_hypo_vars_output("sampledate" TIMESTAMP,"do_value" FLOAT,"poc_l_value" FLOAT,"poc_r_value" FLOAT,"doc_l_value" FLOAT,"doc_r_value" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, 0, 0, 0, 0, 0
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/91dd70379dbcc84b0316bba55852943c
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: bm_hypo_vars_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less19
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 403902 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/bm_hypo_vars.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.22542d4166fa6fe36786611d3ef7498322542d4166fa6fe36786611d3ef74983Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.403902403902Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE bm_hypo_vars_output("sampledate" TIMESTAMP,"do_value" FLOAT,"poc_l_value" FLOAT,"poc_r_value" FLOAT,"doc_l_value" FLOAT,"doc_r_value" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, 0, 0, 0, 0, 0
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/6aeba0ea4b95c969e80fc7a3b2e7e446
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: sp_hypo_vars_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less19
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 426389 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/sp_hypo_vars.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.593a0a63e5155878debcd5e2559521d8593a0a63e5155878debcd5e2559521d8Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.426389426389Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE sp_hypo_vars_output("sampledate" TIMESTAMP,"do_value" FLOAT,"poc_l_value" FLOAT,"poc_r_value" FLOAT,"doc_l_value" FLOAT,"doc_r_value" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, 0, 0, 0, 0, 0
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/5742c2284ea3b2c321bd8121150cc134
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: me_driving_data
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less15
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 1509067 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/me_driving_info.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.8f829c78a559884c2934724bc82489618f829c78a559884c2934724bc8248961Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.15090671509067Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE me_driving_data("sampledate" TIMESTAMP,"nhd_lake_id" TEXT,"thermocline_depth" FLOAT,"epi_temp" FLOAT,"hypo_temp" FLOAT,"area_td" FLOAT,"volume_epi" FLOAT,"volume_hypo" FLOAT,"tp_epi_approx" FLOAT,"tp_hypo_approx" FLOAT,"do_sat_value" FLOAT,"ice" TEXT,"gas_exchange_depth" FLOAT,"i_rad" FLOAT,"inflow_vol" FLOAT,"outflow_vol" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/a023f1630d77bc62e47fe9e9c7394f91
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: mo_driving_data
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less15
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 2123492 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/mo_driving_info.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.40834cdbba5d7ed0812eb2d64695e99740834cdbba5d7ed0812eb2d64695e997Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.21234922123492Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE mo_driving_data("sampledate" TIMESTAMP,"nhd_lake_id" TEXT,"thermocline_depth" FLOAT,"epi_temp" FLOAT,"hypo_temp" FLOAT,"area_td" FLOAT,"volume_epi" FLOAT,"volume_hypo" FLOAT,"tp_epi_approx" FLOAT,"tp_hypo_approx" FLOAT,"do_sat_value" FLOAT,"ice" TEXT,"gas_exchange_depth" FLOAT,"i_rad" FLOAT,"outflow_vol" FLOAT,"pocl_inflow" FLOAT,"pocr_inflow" FLOAT,"docl_inflow" FLOAT,"docr_inflow" FLOAT,"inflow_vol" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/2211d26657912ed1a334a43979a4917b
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: tr_driving_data
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less15
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 1574651 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/tr_driving_info.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.631e4bd80166133d58026717d0e1a245631e4bd80166133d58026717d0e1a245Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.15746511574651Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE tr_driving_data("sampledate" TIMESTAMP,"nhd_lake_id" TEXT,"thermocline_depth" FLOAT,"epi_temp" FLOAT,"hypo_temp" FLOAT,"area_td" FLOAT,"volume_epi" FLOAT,"volume_hypo" FLOAT,"tp_epi_approx" FLOAT,"tp_hypo_approx" FLOAT,"do_sat_value" FLOAT,"ice" TEXT,"gas_exchange_depth" FLOAT,"i_rad" FLOAT,"inflow_vol" FLOAT,"outflow_vol" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/1ba373a7b940ec26191dc389a25097f0
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: al_driving_data
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less15
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 1608990 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/al_driving_info.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.b5845c979cac964b42f99a4f5a11297db5845c979cac964b42f99a4f5a11297dMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.16089901608990Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE al_driving_data("sampledate" TIMESTAMP,"nhd_lake_id" TEXT,"thermocline_depth" FLOAT,"epi_temp" FLOAT,"hypo_temp" FLOAT,"area_td" FLOAT,"volume_epi" FLOAT,"volume_hypo" FLOAT,"tp_epi_approx" FLOAT,"tp_hypo_approx" FLOAT,"do_sat_value" FLOAT,"ice" TEXT,"gas_exchange_depth" FLOAT,"i_rad" FLOAT,"inflow_vol" FLOAT,"outflow_vol" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/0f3f66107aaabcb671b230a0261e380a
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: bm_driving_data
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less15
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 1556135 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/bm_driving_info.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.22262b1e0f4f114857971ab4528f12d222262b1e0f4f114857971ab4528f12d2Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.15561351556135Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE bm_driving_data("sampledate" TIMESTAMP,"nhd_lake_id" TEXT,"thermocline_depth" FLOAT,"epi_temp" FLOAT,"hypo_temp" FLOAT,"area_td" FLOAT,"volume_epi" FLOAT,"volume_hypo" FLOAT,"tp_epi_approx" FLOAT,"tp_hypo_approx" FLOAT,"do_sat_value" FLOAT,"ice" TEXT,"gas_exchange_depth" FLOAT,"i_rad" FLOAT,"inflow_vol" FLOAT,"outflow_vol" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/cdae3adfc14793483a7d1c2a799fe50d
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: sp_driving_data
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less15
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 1621644 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/sp_driving_info.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.39ba1ecd0ba60cf9e2b12bdfd7e74f0c39ba1ecd0ba60cf9e2b12bdfd7e74f0cMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.16216441621644Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE sp_driving_data("sampledate" TIMESTAMP,"nhd_lake_id" TEXT,"thermocline_depth" FLOAT,"epi_temp" FLOAT,"hypo_temp" FLOAT,"area_td" FLOAT,"volume_epi" FLOAT,"volume_hypo" FLOAT,"tp_epi_approx" FLOAT,"tp_hypo_approx" FLOAT,"do_sat_value" FLOAT,"ice" TEXT,"gas_exchange_depth" FLOAT,"i_rad" FLOAT,"inflow_vol" FLOAT,"outflow_vol" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/9fb36e13944315fa8e8822e9b55777c8
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: me_supplemental_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less22
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 1676650 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/me_supplemental_output.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.efbc78e7f086c00ee2146ff21b49dba3efbc78e7f086c00ee2146ff21b49dba3Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.16766501676650Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE me_supplemental_output("sampledate" TIMESTAMP,"lec_epi_value" FLOAT,"epi_light" FLOAT,"hypo_light" FLOAT,"entrainment_multiplier" FLOAT,"epi_theta_npp" FLOAT,"epi_theta_resp" FLOAT,"hypo_theta_npp" FLOAT,"hypo_theta_resp" FLOAT,"mm_epi" FLOAT,"mm_hypo" FLOAT,"o2_diff_value" FLOAT,"lec_hypo_value" TEXT,"td_light" FLOAT,"meandepth_light" FLOAT,"sed_area_epi" FLOAT,"sed_area_hypo" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/4621f92f0bd89fee77cf00ca5751480d
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: mo_supplemental_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less22
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 1677695 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/mo_supplemental_output.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.9ac5ccd367a3e0154e7c55574328c43a9ac5ccd367a3e0154e7c55574328c43aMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.16776951677695Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE mo_supplemental_output("sampledate" TIMESTAMP,"lec_epi_value" FLOAT,"epi_light" FLOAT,"hypo_light" FLOAT,"entrainment_multiplier" FLOAT,"epi_theta_npp" FLOAT,"epi_theta_resp" FLOAT,"hypo_theta_npp" FLOAT,"hypo_theta_resp" FLOAT,"mm_epi" FLOAT,"mm_hypo" FLOAT,"o2_diff_value" FLOAT,"lec_hypo_value" TEXT,"td_light" FLOAT,"meandepth_light" FLOAT,"sed_area_epi" FLOAT,"sed_area_hypo" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/e069132e93406e2362062cdfc9d2451e
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: tr_supplemental_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less22
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 1635919 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/tr_supplemental_output.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.e25b627fa9d694549889cac9513df0b7e25b627fa9d694549889cac9513df0b7Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.16359191635919Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE tr_supplemental_output("sampledate" TIMESTAMP,"lec_epi_value" FLOAT,"epi_light" FLOAT,"hypo_light" FLOAT,"entrainment_multiplier" FLOAT,"epi_theta_npp" FLOAT,"epi_theta_resp" FLOAT,"hypo_theta_npp" FLOAT,"hypo_theta_resp" FLOAT,"mm_epi" FLOAT,"mm_hypo" FLOAT,"o2_diff_value" FLOAT,"lec_hypo_value" TEXT,"td_light" FLOAT,"meandepth_light" FLOAT,"sed_area_epi" FLOAT,"sed_area_hypo" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/933334c9a69eeb21d9baaf6e8a0e6c2f
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: al_supplemental_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less22
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 1446387 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/al_supplemental_output.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.5f226ea3762e8a7680fc0fe5337295865f226ea3762e8a7680fc0fe533729586Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.14463871446387Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE al_supplemental_output("sampledate" TIMESTAMP,"lec_epi_value" FLOAT,"epi_light" FLOAT,"hypo_light" FLOAT,"entrainment_multiplier" FLOAT,"epi_theta_npp" FLOAT,"epi_theta_resp" FLOAT,"hypo_theta_npp" FLOAT,"hypo_theta_resp" FLOAT,"mm_epi" FLOAT,"mm_hypo" FLOAT,"o2_diff_value" FLOAT,"lec_hypo_value" TEXT,"td_light" FLOAT,"meandepth_light" FLOAT,"sed_area_epi" FLOAT,"sed_area_hypo" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/5b6b394431304e395ab97f5917dc2d70
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: bm_supplemental_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less22
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 1639439 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/bm_supplemental_output.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.198a4e2b75320b4e41b3daa1f8188a84198a4e2b75320b4e41b3daa1f8188a84Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.16394391639439Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE bm_supplemental_output("sampledate" TIMESTAMP,"lec_epi_value" FLOAT,"epi_light" FLOAT,"hypo_light" FLOAT,"entrainment_multiplier" FLOAT,"epi_theta_npp" FLOAT,"epi_theta_resp" FLOAT,"hypo_theta_npp" FLOAT,"hypo_theta_resp" FLOAT,"mm_epi" FLOAT,"mm_hypo" FLOAT,"o2_diff_value" FLOAT,"lec_hypo_value" TEXT,"td_light" FLOAT,"meandepth_light" FLOAT,"sed_area_epi" FLOAT,"sed_area_hypo" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/5632d910b55311323d380893d9478fb8
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: sp_supplemental_output
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less22
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.'numHeaderLines' element: 1
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidvalid
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expected,A valid fieldDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentvalid
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0A\nA valid recordDelimiter value was foundhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7numberOfRecordsPresencevalid
Type:metadata
System:knb
On failure:warn
Is the numberOfRecords element present?Warn the user if the numberOfRecords check is not presentA number of records element is expected for this entitynumberOfRecords element foundThis is a valuable check that we have the correct table.
8entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 1702292 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
9integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
10dateTimeFormatStringvalid
Type:metadata
System:knb
On failure:warn
dateTime/formatString specified in metadata is from a preferred set of valuesCertain features of dateTime data formats are preferred, eg, ISO 8601, 4-digit years. This check looks at metadata to see if the dateTime format is in that preferred list.A formatString value that is a member of the preferred set is expected.YYYY-MM-DDA preferred format string was found.Modify the dateTime/formatString, selecting from among the preferred values one that best matches the data format
11attributeNamesUniquevalid
Type:metadata
System:knb
On failure:warn
Attribute names are uniqueChecks if attributeName values are unique in the table. Not required by EML.Unique attribute names.trueA good table does not have duplicate column names.EML Best Practices
12displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayed
13urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
14onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/sp_supplemental_output.csv
15integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.f03dd41ec6af7d53c14af7090bd48e7bf03dd41ec6af7d53c14af7090bd48e7bMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
16entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.17022921702292Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
17databaseTableCreatedvalid
Type:metadata
System:knb
On failure:error
Database table createdStatus of creating a database tableA database table is expected to be generated from the EML attributes.A database table was generated from the attributes descriptionCREATE TABLE sp_supplemental_output("sampledate" TIMESTAMP,"lec_epi_value" FLOAT,"epi_light" FLOAT,"hypo_light" FLOAT,"entrainment_multiplier" FLOAT,"epi_theta_npp" FLOAT,"epi_theta_resp" FLOAT,"hypo_theta_npp" FLOAT,"hypo_theta_resp" FLOAT,"mm_epi" FLOAT,"mm_hypo" FLOAT,"o2_diff_value" FLOAT,"lec_hypo_value" TEXT,"td_light" FLOAT,"meandepth_light" FLOAT,"sed_area_epi" FLOAT,"sed_area_hypo" FLOAT);
18examineRecordDelimitervalid
Type:congruency
System:knb
On failure:warn
Data are examined and possible record delimiters are displayedIf no record delimiter was specified, we assume that \r\n is the delimiter. Search the first row for other record delimiters and see if other delimiters are found.No other potential record delimiters expected in the first row.No other potential record delimiters were detected. A valid record delimiter was previously detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
19displayFirstInsertRowinfo
Type:data
System:knb
On failure:info
Display first insert rowDisplay the first row of data values to be inserted into the database tableThe first row of data values should be displayed1995-01-01, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA
20onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: file:///home/pasta/local/data/knb-lter-ntl.421.1/872cb1bb0f035039c34c4800f5635a6c
21tooFewFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have fewer fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
22tooManyFieldsvalid
Type:congruency
System:knb
On failure:error
Data does not have more fields than metadata attributesCompare number of fields specified in metadata to number of fields found in a data recordNo errors detectedhttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#dataFormat
23dataLoadStatusvalid
Type:congruency
System:knb
On failure:warn
Data can be loaded into the databaseStatus of loading the data table into a databaseNo errors expected during data loading or data loading was not attempted for this data entityThe data table loaded successfully into a database
24numberOfRecordsvalid
Type:congruency
System:knb
On failure:warn
Number of records in metadata matches number of rows loadedCompare number of records specified in metadata to number of records found in data73057305The expected number of records (7305) was found in the data table.
25headerRowAttributeNamesinfo
Type:congruency
System:lter
On failure:info
Header row is displayed alongside attribute namesCompare the content of the data header row to the content of EML attribute names.No expectation, information only Customer should evaluate the findings
26dateFormatMatchesvalid
Type:congruency
System:lter
On failure:warn
Date format in metadata matches datadateTime/formatString in attribute metadata is from the preferred list, and the data matches. A non-match generates only a warn.Format string is preferred, and all data values match the format stringData values matched the specified formatString.Dates should be consistently formatted and match the formatString in metadata.
Entity Report
Entity Name: run_model_script
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less16
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.No 'numHeaderLines' element foundIf data file contains header lines, 'numHeaderLines' must be specified.Add 'numHeaderLines' element if needed.
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidinfo
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expectednullA fieldDelimiter value is not checked for binary entities or entities with an externally defined formathttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentinfo
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0AnullA recordDelimiter value is not checked for binary entities or entities with an externally defined formathttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 15513 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
8integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
9displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayedCannot display NON-PLAIN TEXT DATA
10urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
11onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/run_model_script.R
12integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.68b95bd17a3f493bb512ec6453eb1a8b68b95bd17a3f493bb512ec6453eb1a8bMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
13entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.1551315513Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
Entity Report
Entity Name: main_metab_function_model_script
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less32
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.No 'numHeaderLines' element foundIf data file contains header lines, 'numHeaderLines' must be specified.Add 'numHeaderLines' element if needed.
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidinfo
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expectednullA fieldDelimiter value is not checked for binary entities or entities with an externally defined formathttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentinfo
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0AnullA recordDelimiter value is not checked for binary entities or entities with an externally defined formathttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 29537 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
8integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
9displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayedCannot display NON-PLAIN TEXT DATA
10urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
11onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/main_metab_function_model_script.R
12integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.8bdc193df59adbc0bb6f5d68992607c58bdc193df59adbc0bb6f5d68992607c5Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
13entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.2953729537Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
Entity Report
Entity Name: obs_data_create_model_script
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less28
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.No 'numHeaderLines' element foundIf data file contains header lines, 'numHeaderLines' must be specified.Add 'numHeaderLines' element if needed.
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidinfo
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expectednullA fieldDelimiter value is not checked for binary entities or entities with an externally defined formathttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentinfo
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0AnullA recordDelimiter value is not checked for binary entities or entities with an externally defined formathttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 5432 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
8integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
9displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayedCannot display NON-PLAIN TEXT DATA
10urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
11onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/obs_data_create_model_script.R
12integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.dfc83a1d9bd1f36044a77f999156fed3dfc83a1d9bd1f36044a77f999156fed3Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
13entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.54325432Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
Entity Report
Entity Name: td_assign_model_script
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less22
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.No 'numHeaderLines' element foundIf data file contains header lines, 'numHeaderLines' must be specified.Add 'numHeaderLines' element if needed.
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidinfo
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expectednullA fieldDelimiter value is not checked for binary entities or entities with an externally defined formathttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentinfo
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0AnullA recordDelimiter value is not checked for binary entities or entities with an externally defined formathttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 2570 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
8integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
9displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayedCannot display NON-PLAIN TEXT DATA
10urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
11onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/td_assign_model_script.R
12integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.21168858ee1263cececd4876e70d78bf21168858ee1263cececd4876e70d78bfMatching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
13entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.25702570Examining the entity size is a method for checking that this is the correct entity.Check the entity size.
Entity Report
Entity Name: volume_weighted_avg_model_script
Entity Identifier:
# Identifier Status Quality Check Name Description Expected Found Explanation Suggestion Reference
1entityNameLengthvalid
Type:metadata
System:knb
On failure:warn
Length of entityName is not excessive (less than 100 char)length of entity name is less than 100 charactersentityName value is 100 characters or less32
2entityDescriptionPresentvalid
Type:metadata
System:lter
On failure:warn
An entity description is presentCheck for presence of an entity description.EML Best practices pp. 32-33, "...should have enough information for a user..."trueWith entityName sometimes serving as a file name rather than a title, it is important to be very descriptive here.
3numHeaderLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numHeaderLines' element is presentCheck for presence of the 'numHeaderLines' element.Document contains 'numHeaderLines' element.No 'numHeaderLines' element foundIf data file contains header lines, 'numHeaderLines' must be specified.Add 'numHeaderLines' element if needed.
4numFooterLinesPresentinfo
Type:metadata
System:knb
On failure:info
'numFooterLines' element is presentCheck for presence of the 'numFooterLines' element.Document contains 'numFooterLines' element.No 'numFooterLines' element foundIf data file contains footer lines, 'numFooterLines' must be specified.Add 'numFooterLines' element if needed.
5fieldDelimiterValidinfo
Type:metadata
System:knb
On failure:error
Field delimiter is a single characterField delimiters should be one character onlyA single character is expectednullA fieldDelimiter value is not checked for binary entities or entities with an externally defined formathttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#fieldDelimiter
6recordDelimiterPresentinfo
Type:metadata
System:knb
On failure:warn
Record delimiter is presentCheck presence of record delimiter. Check that the record delimiter is one of the suggested values.A record delimiter from a list of suggested values: \n, \r, \r\n, #x0A, #x0D, #x0D#x0AnullA recordDelimiter value is not checked for binary entities or entities with an externally defined formathttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-physical.html#recordDelimiter
7entitySizePresencevalid
Type:metadata
System:knb
On failure:warn
Check for presence of an entity size elementLook for entity size element as a prep for checking congruence, and if not present, generate a warn. Note that to be most useful (i.e, to check congruence), entity size should contain the most precise measure of size, which is "byte" (the default unit); however, the presence or name of the entity size unit is NOT checked.Entity size is present. If unit="byte" or unit is omitted (default = byte), then congruence can be checked.Found entity size element with value of 7240 and size unit specified as 'byte'.Examining the entity size is prep for checking congruence. Including the element is best practice, and if not present, a warn is generated. To be most useful, entity size should contain the most precise measure of size, which is "byte" (the default unit).Include an entity size in bytes Example success: knb-lter-sbc.3.12. Example of size in units other than byte: knb-lter-mcr.6.56.
8integrityChecksumPresencevalid
Type:metadata
System:lter
On failure:warn
A physical/authentication element is present and specifies a method attribute with a value of MD5 or SHA-1Check for presence of a physical/authentication element containing a checksum or hash value for an integrity check (e.g. MD5, SHA-1). Warn if an entity does not have a physical/authentication element, or if none of the physical/authentication elements specify a method attribute with a value of MD5 or SHA-1.At least one physical/authentication element with a method attribute specifying MD5 or SHA-1 and containing a checksum or hash value that can be used to perform an integrity check on the data.truePASTA will use this value to check the integrity of the data it downloads from your site. In addition, PASTA is planning to compare the contributor-supplied checksum/hash value documented in the physical/authentication element to the checksum/hash value of this entity downloaded from previous revisions of this data package. If PASTA already has a copy of this entity, it will be able to avoid an unnecessary download of the entity from your site, resulting in faster processing of the new data package revision when you update it in PASTA.Add a physical/authentication element and store the entity checksum or hash value in it using a method such as MD5 or SHA-1.
9displayDownloadDatainfo
Type:data
System:knb
On failure:info
Display downloaded dataDisplay the first kilobyte of data that is downloadedUp to one kilobyte of data should be displayedCannot display NON-PLAIN TEXT DATA
10urlReturnsDatavalid
Type:congruency
System:knb
On failure:error
URL returns dataChecks whether a URL returns data. Unless the URL is specified to be function="information", the URL should return the resource for download.A data entity that matches the metadatatruehttp://knb.ecoinformatics.org/software/eml/eml-2.1.0/eml-resource.html#UrlType
11onlineURLsvalid
Type:congruency
System:knb
On failure:error
Online URLs are liveCheck that online URLs return somethingtruetrueSucceeded in accessing URL: https://ezeml.edirepository.org/user-data/Austin_Delany-5da2850d35b3ae0842d8ef7eab703afc/uploads/thesis_submission_package/volume_weighted_avg_model_script.R
12integrityChecksumvalid
Type:congruency
System:lter
On failure:error
Compare the metadata checksum for an entity to the checksum of the downloaded entityTwo possible responses: valid if checksums match; error if checksums do not match.6eff7793505d8e5ed0e2ef6e703da7d76eff7793505d8e5ed0e2ef6e703da7d7Matching checksums will ensure data integrity during upload to the repository.If the found integrity hash value does not match the expected integrity hash value, there may have been a loss of integrity in the data download. Check that the hash method and hash value documented in the metadata are the correct values.
13entitySizeCongruencevalid
Type:congruency
System:knb
On failure:error
Check that the entity size in the Level 0 metadata matches the one PASTA+ generates.Compare raw file size of file to [entity]/physical/size element in metadata. Return error if not matching.72407240Examining the entity size is a method for checking that this is the correct entity.Check the entity size.